RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 HNRNPCL3B7ZW38 293 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 ANHXE9PGG2 379 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 CXCL11O14625 94 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 ZNF197O14709 1029 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 ZNHIT1O43257 154 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 CYTIPO60759 359 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 OR4F21O95013 312 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 GOT2P00505 430 aaKnown RBP1.49□□□□□ -2.17
BRCA1-202ENST00000354071 MT-ND2P03891 347 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 HNRNPCL4P0DMR1 293 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 CALCBP10092 127 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 TOP1P11387 765 aaKnown RBP1.49□□□□□ -2.17
BRCA1-202ENST00000354071 GZMAP12544 262 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 CDH3P22223 829 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 ACVRL1P37023 503 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 ATP5OP48047 213 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 SLC34A1Q06495 639 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 ST3GAL1Q11201 340 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 GAGE2BQ13066 116 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 CUL2Q13617 745 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 ZNF528Q3MIS6 628 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 GAGE2EQ4V326 116 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 TPGS2Q68CL5 300 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 GAGE2AQ6NT46 116 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 C11orf63Q6NUN7 778 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 CTR9Q6PD62 1173 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 CRIP3Q6Q6R5 217 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 DEFB132Q7Z7B7 95 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 ZDHHC17Q8IUH5 632 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 GBP7Q8N8V2 638 aaPredicted RBP1.49□□□□□ -2.17
BRCA1-202ENST00000354071 GANCQ8TET4 914 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 SEPT8Q92599 483 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 FUNDC2Q9BWH2 189 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 SCAND2PQ9GZW5 306 aaPredicted RBP1.49□□□□□ -2.17
BRCA1-202ENST00000354071 UBQLN3Q9H347 655 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 SLC38A7Q9NVC3 462 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 RBM28Q9NW13 759 aaKnown RBP1.49□□□□□ -2.17
BRCA1-202ENST00000354071 GAGE2DQ9UEU5 116 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 PPP2R2CQ9Y2T4 447 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 PLEKHG2Q9H7P9 1386 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 COL2A1P02458 1487 aaPredicted RBP1.49□□□□□ -2.17
BRCA1-202ENST00000354071 SH3TC1Q8TE82 1336 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 CKAP5Q14008 2032 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 SYNJ2BP-COX16A0A087WUM0 186 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 A0A1B0GUL7 405 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 OR2AG2A6NM03 316 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 MATN3O15232 486 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 ECE2O60344 883 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 VPS26AO75436 327 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 PEX11BO96011 259 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 IL1BP01584 269 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 IGHEP01854 428 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 FAM106CPP0CH98 169 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 CD59P13987 128 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 CSF2RAP15509 400 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 ITGB6P18564 788 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 SULT2A1Q06520 285 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 SCGB2A2Q13296 93 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 ZNF234Q14588 700 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 RBBP7Q16576 425 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 STX1AQ16623 288 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 ODF4Q2M2E3 257 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 FUT11Q495W5 492 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 AGKQ53H12 422 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 LYPLAL1Q5VWZ2 237 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 CEACAM20Q6UY09 585 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 TMEM64Q6YI46 380 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 SLC22A9Q8IVM8 553 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 MAB21L3Q8N8X9 362 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 SLC24A4Q8NFF2 622 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 THAP6Q8TBB0 222 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 DQX1Q8TE96 717 aaKnown RBP1.49□□□□□ -2.17
BRCA1-202ENST00000354071 PPP4R1Q8TF05 950 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 SMPDL3AQ92484 453 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 TMEM19Q96HH6 336 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 PSKH2Q96QS6 385 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 RTP3Q9BQQ7 232 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 SLC25A33Q9BSK2 321 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 TPPP3Q9BW30 176 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 MAGT1Q9H0U3 335 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 TSPYL1Q9H0U9 437 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 GPR173Q9NS66 373 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 STAU2Q9NUL3 570 aaKnown RBP eCLIP1.49□□□□□ -2.17
BRCA1-202ENST00000354071 ATAD3AQ9NVI7 634 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 NARFQ9UHQ1 456 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 WDR37Q9Y2I8 494 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 ATP10AO60312 1499 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 COL3A1P02461 1466 aaPredicted RBP1.49□□□□□ -2.17
BRCA1-202ENST00000354071 ADGRB3O60242 1522 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 ADAMTSL1Q8N6G6 1762 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 SAMD9LQ8IVG5 1584 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 IGLV5-52A0A0A0MRZ9 124 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 ERICH4A6NGS2 130 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 ANKRD66B4E2M5 251 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 FOXE1O00358 373 aaPredicted RBP1.49□□□□□ -2.17
BRCA1-202ENST00000354071 E2F3O00716 465 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 PRRG2O14669 202 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 KLF11O14901 512 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 SURF6O75683 361 aaKnown RBP1.49□□□□□ -2.17
BRCA1-202ENST00000354071 CPNE6O95741 557 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms