RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 GLCCI1Q86VQ1 547 aa9.91□□□□□ -0.82
CHRNA1-202ENST00000348749 PIANPQ8IYJ0 282 aa9.91□□□□□ -0.82
CHRNA1-202ENST00000348749 DNAJC5GQ8N7S2 189 aa9.91□□□□□ -0.82
CHRNA1-202ENST00000348749 CLHC1Q8NHS4 586 aa9.91□□□□□ -0.82
CHRNA1-202ENST00000348749 UTP15Q8TED0 518 aaKnown RBP9.91□□□□□ -0.82
CHRNA1-202ENST00000348749 NELL1Q92832 810 aa9.91□□□□□ -0.82
CHRNA1-202ENST00000348749 USP7Q93009 1102 aa9.91□□□□□ -0.82
CHRNA1-202ENST00000348749 CREB3L1Q96BA8 519 aa9.91□□□□□ -0.82
CHRNA1-202ENST00000348749 KCNJ15Q99712 375 aa9.91□□□□□ -0.82
CHRNA1-202ENST00000348749 FAM126AQ9BYI3 521 aaPredicted RBP9.91□□□□□ -0.82
CHRNA1-202ENST00000348749 PPP1R3EQ9H7J1 279 aa9.91□□□□□ -0.82
CHRNA1-202ENST00000348749 ANKRA2Q9H9E1 313 aa9.91□□□□□ -0.82
CHRNA1-202ENST00000348749 RDH14Q9HBH5 336 aa9.91□□□□□ -0.82
CHRNA1-202ENST00000348749 SLC25A19Q9HC21 320 aa9.91□□□□□ -0.82
CHRNA1-202ENST00000348749 GALNT9Q9HCQ5 603 aa9.91□□□□□ -0.82
CHRNA1-202ENST00000348749 FZD3Q9NPG1 666 aa9.91□□□□□ -0.82
CHRNA1-202ENST00000348749 NLKQ9UBE8 527 aa9.91□□□□□ -0.82
CHRNA1-202ENST00000348749 ENOPH1Q9UHY7 261 aa9.91□□□□□ -0.82
CHRNA1-202ENST00000348749 ZMYM5Q9UJ78 669 aa9.91□□□□□ -0.82
CHRNA1-202ENST00000348749 ZNF451Q9Y4E5 1061 aa9.91□□□□□ -0.82
CHRNA1-202ENST00000348749 CLCA3PQ9Y6N3 262 aa9.91□□□□□ -0.82
CHRNA1-202ENST00000348749 TRAV19A0A0A6YYK7 116 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 A8MUA0 341 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 ANKRD66B4E2M5 251 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 SGK494L7N484 410 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 CLIC1O00299 241 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 PCDH17O14917 1159 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 ATG13O75143 517 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 ULK1O75385 1050 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 IFNA7P01567 189 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 IGHA2P01877 340 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 PRPH2P23942 346 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 MAPK1P28482 360 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 CLCNKAP51800 687 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 GBX2P52951 348 aaPredicted RBP9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 PPP3R1P63098 170 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 MLLT11Q13015 90 aaPredicted RBP9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 PAN2Q504Q3 1202 aaKnown RBP9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 ZNF648Q5T619 568 aaPredicted RBP9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 LYPLAL1Q5VWZ2 237 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 TMEM81Q6P7N7 255 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 TSEN54Q7Z6J9 526 aaKnown RBP9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 ANKRD46Q86W74 232 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 RBFAQ8N0V3 343 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 SYNPOQ8N3V7 929 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 ANKRD53Q8N9V6 530 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 ATP6V1C2Q8NEY4 427 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 OR9Q1Q8NGQ5 310 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 BRI3BPQ8WY22 251 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 AP3S1Q92572 193 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 FBXO32Q969P5 355 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 ZSWIM3Q96MP5 696 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 MAPKAP1Q9BPZ7 522 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 NT5DC2Q9H857 520 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 EMC7Q9NPA0 242 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 ZC4H2Q9NQZ6 224 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 FARSBQ9NSD9 589 aaKnown RBP9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 TMEM184CQ9NVA4 438 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 GPRC5BQ9NZH0 403 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 FKBPLQ9UIM3 349 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 TMCC3Q9ULS5 477 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 PPT2Q9UMR5 302 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 CDH10Q9Y6N8 788 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 RNF215Q9Y6U7 377 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 ALPK3Q96L96 1907 aa9.9□□□□□ -0.82
CHRNA1-202ENST00000348749 TTC3P53804 2025 aa9.9□□□□□ -0.83
CHRNA1-202ENST00000348749 SERTM1A2A2V5 107 aa9.9□□□□□ -0.83
CHRNA1-202ENST00000348749 TUBAL3A6NHL2 446 aa9.9□□□□□ -0.83
CHRNA1-202ENST00000348749 INMT-MINDY4F8WBC2 141 aa9.9□□□□□ -0.83
CHRNA1-202ENST00000348749 MANBAO00462 879 aa9.9□□□□□ -0.83
CHRNA1-202ENST00000348749 FFAR3O14843 346 aa9.9□□□□□ -0.83
CHRNA1-202ENST00000348749 SYN3O14994 580 aa9.9□□□□□ -0.83
CHRNA1-202ENST00000348749 GPR42O15529 346 aa9.9□□□□□ -0.83
CHRNA1-202ENST00000348749 FZD6O60353 706 aa9.9□□□□□ -0.83
CHRNA1-202ENST00000348749 OR1I1O60431 355 aa9.9□□□□□ -0.83
CHRNA1-202ENST00000348749 PLOD3O60568 738 aa9.9□□□□□ -0.83
CHRNA1-202ENST00000348749 ZNF7P17097 686 aaPredicted RBP9.9□□□□□ -0.83
CHRNA1-202ENST00000348749 ENGP17813 658 aa9.9□□□□□ -0.83
CHRNA1-202ENST00000348749 LHCGRP22888 699 aa9.9□□□□□ -0.83
CHRNA1-202ENST00000348749 DGKAP23743 735 aa9.9□□□□□ -0.83
CHRNA1-202ENST00000348749 SDC2P34741 201 aa9.9□□□□□ -0.83
CHRNA1-202ENST00000348749 CACNB2Q08289 660 aaPredicted RBP9.9□□□□□ -0.83
CHRNA1-202ENST00000348749 DBPQ10586 325 aaPredicted RBP9.9□□□□□ -0.83
CHRNA1-202ENST00000348749 POU4F3Q15319 338 aa9.9□□□□□ -0.83
CHRNA1-202ENST00000348749 DUOXA1Q1HG43 343 aa9.9□□□□□ -0.83
CHRNA1-202ENST00000348749 MICAQ29983 383 aa9.9□□□□□ -0.83
CHRNA1-202ENST00000348749 ZRANB3Q5FWF4 1079 aa9.9□□□□□ -0.83
CHRNA1-202ENST00000348749 C10orf120Q5SQS8 335 aa9.9□□□□□ -0.83
CHRNA1-202ENST00000348749 PRAMEF19Q5SWL8 479 aa9.9□□□□□ -0.83
CHRNA1-202ENST00000348749 BICRALQ6AI39 1079 aa9.9□□□□□ -0.83
CHRNA1-202ENST00000348749 RGMBQ6NW40 437 aa9.9□□□□□ -0.83
CHRNA1-202ENST00000348749 TMEM107Q6UX40 140 aa9.9□□□□□ -0.83
CHRNA1-202ENST00000348749 C16orf62Q7Z3J2 963 aa9.9□□□□□ -0.83
CHRNA1-202ENST00000348749 SLC34A3Q8N130 599 aa9.9□□□□□ -0.83
CHRNA1-202ENST00000348749 Q8N402 240 aa9.9□□□□□ -0.83
CHRNA1-202ENST00000348749 TMEM145Q8NBT3 493 aa9.9□□□□□ -0.83
CHRNA1-202ENST00000348749 TPD52L3Q96J77 140 aa9.9□□□□□ -0.83
CHRNA1-202ENST00000348749 NIPSNAP1Q9BPW8 284 aa9.9□□□□□ -0.83
CHRNA1-202ENST00000348749 TMEM43Q9BTV4 400 aa9.9□□□□□ -0.83
CHRNA1-202ENST00000348749 DOHHQ9BU89 302 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms