RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 CASP9P55211 416 aa19.42■□□□□ 0.7
CHRNA3-202ENST00000348639 SELENOWP63302 87 aa19.42■□□□□ 0.7
CHRNA3-202ENST00000348639 RBM48Q5RL73 367 aaKnown RBP19.42■□□□□ 0.7
CHRNA3-202ENST00000348639 USP30Q70CQ3 517 aa19.42■□□□□ 0.7
CHRNA3-202ENST00000348639 NUDT13Q86X67 352 aa19.42■□□□□ 0.7
CHRNA3-202ENST00000348639 OR52E1Q8NGJ3 308 aa19.42■□□□□ 0.7
CHRNA3-202ENST00000348639 NECTIN4Q96NY8 510 aa19.42■□□□□ 0.7
CHRNA3-202ENST00000348639 BARD1Q99728 777 aaKnown RBP19.42■□□□□ 0.7
CHRNA3-202ENST00000348639 LTB4R2Q9NPC1 389 aa19.42■□□□□ 0.7
CHRNA3-202ENST00000348639 CD93Q9NPY3 652 aa19.42■□□□□ 0.7
CHRNA3-202ENST00000348639 RSL24D1Q9UHA3 163 aaKnown RBP19.42■□□□□ 0.7
CHRNA3-202ENST00000348639 PADI2Q9Y2J8 665 aa19.42■□□□□ 0.7
CHRNA3-202ENST00000348639 CLEC3AO75596 197 aa19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 HOXC4P09017 264 aaPredicted RBP19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 ITGAMP11215 1152 aa19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 DDX5P17844 614 aaKnown RBP19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 UQCRC2P22695 453 aa19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 IGFBP5P24593 272 aa19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 YAP1P46937 504 aaKnown RBP19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 TPD52P55327 224 aaPredicted RBP19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 IL18R1Q13478 541 aa19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 SCARB2Q14108 478 aa19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 ZBED5Q49AG3 693 aa19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 GPR141Q7Z602 305 aa19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 ADCK2Q7Z695 626 aa19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 CYP4Z1Q86W10 505 aa19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 RNF130Q86XS8 419 aa19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 TTLQ8NG68 377 aa19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 OR5AK3PQ8NH89 298 aa19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 HDAC2Q92769 488 aaKnown RBP19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 NPLQ9BXD5 320 aaPredicted RBP19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 FGF22Q9HCT0 170 aa19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 PRDM8Q9NQV8 689 aa19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 NCKAP1Q9Y2A7 1128 aa19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 SAMHD1Q9Y3Z3 626 aaKnown RBP19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 MAP4K5Q9Y4K4 846 aa19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 TRBC2A0A5B9 178 aa19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 SOAT1P35610 550 aa19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 RXRGP48443 463 aa19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 CDK9P50750 372 aaKnown RBP19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 CLDN2P57739 230 aa19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 EEF1A2Q05639 463 aaKnown RBP19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 TCEA2Q15560 299 aa19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 RPE65Q16518 533 aa19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 ZNF630Q2M218 657 aaPredicted RBP19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 KDM4DQ6B0I6 523 aa19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 KIAA1324Q6UXG2 1013 aaKnown RBP19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 CCDC80Q76M96 950 aa19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 UBE3DQ7Z6J8 389 aa19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 PIK3C3Q8NEB9 887 aa19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 CREB3L4Q8TEY5 395 aa19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 ZNF764Q96H86 408 aaPredicted RBP19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 EPS8L2Q9H6S3 715 aa19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 REEP1Q9H902 201 aa19.41■□□□□ 0.7
CHRNA3-202ENST00000348639 PRSS38A1L453 326 aa19.4■□□□□ 0.7
CHRNA3-202ENST00000348639 POM121BA6NF01 834 aa19.4■□□□□ 0.7
CHRNA3-202ENST00000348639 H3BQ06 376 aaPredicted RBP19.4■□□□□ 0.7
CHRNA3-202ENST00000348639 PRICKLE3O43900 615 aaPredicted RBP19.4■□□□□ 0.7
CHRNA3-202ENST00000348639 DAPP51397 102 aa19.4■□□□□ 0.7
CHRNA3-202ENST00000348639 ZNF691Q5VV52 312 aa19.4■□□□□ 0.7
CHRNA3-202ENST00000348639 PLD3Q8IV08 490 aa19.4■□□□□ 0.7
CHRNA3-202ENST00000348639 NFKBIDQ8NI38 313 aa19.4■□□□□ 0.7
CHRNA3-202ENST00000348639 OR5P2Q8WZ92 322 aa19.4■□□□□ 0.7
CHRNA3-202ENST00000348639 NLNQ9BYT8 704 aa19.4■□□□□ 0.7
CHRNA3-202ENST00000348639 CXorf36Q9H7Y0 433 aa19.4■□□□□ 0.7
CHRNA3-202ENST00000348639 DDX31Q9H8H2 851 aaKnown RBP19.4■□□□□ 0.7
CHRNA3-202ENST00000348639 MRPS30Q9NP92 439 aaKnown RBP19.4■□□□□ 0.7
CHRNA3-202ENST00000348639 DRD1P21728 446 aa19.39■□□□□ 0.69
CHRNA3-202ENST00000348639 CRHBPP24387 322 aa19.39■□□□□ 0.69
CHRNA3-202ENST00000348639 KIAA1024LP59773 190 aa19.39■□□□□ 0.69
CHRNA3-202ENST00000348639 CDK6Q00534 326 aa19.39■□□□□ 0.69
CHRNA3-202ENST00000348639 LAPTM4AQ15012 233 aa19.39■□□□□ 0.69
CHRNA3-202ENST00000348639 C6orf141Q5SZD1 244 aa19.39■□□□□ 0.69
CHRNA3-202ENST00000348639 ZNF773Q6PK81 442 aa19.39■□□□□ 0.69
CHRNA3-202ENST00000348639 CHDHQ8NE62 594 aaPredicted RBP19.39■□□□□ 0.69
CHRNA3-202ENST00000348639 RPLP0P6Q8NHW5 317 aa19.39■□□□□ 0.69
CHRNA3-202ENST00000348639 MRGPRX1Q96LB2 322 aa19.39■□□□□ 0.69
CHRNA3-202ENST00000348639 OR2M4Q96R27 311 aa19.39■□□□□ 0.69
CHRNA3-202ENST00000348639 PDP1Q9P0J1 537 aaPredicted RBP19.39■□□□□ 0.69
CHRNA3-202ENST00000348639 CA5BQ9Y2D0 317 aa19.39■□□□□ 0.69
CHRNA3-202ENST00000348639 HEBP2Q9Y5Z4 205 aa19.39■□□□□ 0.69
CHRNA3-202ENST00000348639 PDPK1O15530 556 aa19.39■□□□□ 0.69
CHRNA3-202ENST00000348639 B4GAT1O43505 415 aa19.39■□□□□ 0.69
CHRNA3-202ENST00000348639 TMPRSS11DO60235 418 aa19.39■□□□□ 0.69
CHRNA3-202ENST00000348639 MITFO75030 526 aaPredicted RBP19.39■□□□□ 0.69
CHRNA3-202ENST00000348639 ARAFP10398 606 aa19.39■□□□□ 0.69
CHRNA3-202ENST00000348639 SLC5A2P31639 672 aa19.39■□□□□ 0.69
CHRNA3-202ENST00000348639 RYKP34925 604 aa19.39■□□□□ 0.69
CHRNA3-202ENST00000348639 FRKP42685 505 aaPredicted RBP19.39■□□□□ 0.69
CHRNA3-202ENST00000348639 ALDH9A1P49189 494 aa19.39■□□□□ 0.69
CHRNA3-202ENST00000348639 ISL1P61371 349 aa19.39■□□□□ 0.69
CHRNA3-202ENST00000348639 ABATP80404 500 aa19.39■□□□□ 0.69
CHRNA3-202ENST00000348639 MRPS21P82921 87 aaKnown RBP19.39■□□□□ 0.69
CHRNA3-202ENST00000348639 CWF19L1Q69YN2 538 aaKnown RBP19.39■□□□□ 0.69
CHRNA3-202ENST00000348639 OR4C11Q6IEV9 310 aa19.39■□□□□ 0.69
CHRNA3-202ENST00000348639 MPP4Q96JB8 637 aa19.39■□□□□ 0.69
CHRNA3-202ENST00000348639 EPYCQ99645 322 aa19.39■□□□□ 0.69
CHRNA3-202ENST00000348639 TMEM121BQ9BXQ6 578 aaPredicted RBP19.39■□□□□ 0.69
CHRNA3-202ENST00000348639 ABCG4Q9H172 646 aa19.39■□□□□ 0.69
CHRNA3-202ENST00000348639 SLAMF7Q9NQ25 335 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms