RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 OR3A3P47888 321 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 AP2S1P53680 142 aaPredicted RBP15.23■□□□□ 0.03
HMGA1-202ENST00000347617 FAPQ12884 760 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 HYAL2Q12891 473 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 MICAQ29983 383 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 SGO1Q5FBB7 561 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 CEP78Q5JTW2 689 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 SLC35F1Q5T1Q4 408 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 NCEH1Q6PIU2 408 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 NLRP8Q86W28 1048 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 ELMOD2Q8IZ81 293 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 LPCAT1Q8NF37 534 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 B3GNT7Q8NFL0 401 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 OR8J2Q8NGG1 315 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 OR4C15Q8NGM1 316 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 SELENOMQ8WWX9 145 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 OTUB2Q96DC9 234 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 RNF167Q9H6Y7 350 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 RAD18Q9NS91 495 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 PHF11Q9UIL8 331 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 SNX8Q9Y5X2 465 aa15.23■□□□□ 0.03
HMGA1-202ENST00000347617 LOC105371267A0A1B0GV96 52 aa15.22■□□□□ 0.03
HMGA1-202ENST00000347617 A0A1W2PQ09 198 aa15.22■□□□□ 0.03
HMGA1-202ENST00000347617 AP3D1O14617 1153 aa15.22■□□□□ 0.03
HMGA1-202ENST00000347617 RGS5O15539 181 aa15.22■□□□□ 0.03
HMGA1-202ENST00000347617 ZNF780AO75290 641 aaPredicted RBP15.22■□□□□ 0.03
HMGA1-202ENST00000347617 GJB3O75712 270 aa15.22■□□□□ 0.03
HMGA1-202ENST00000347617 C1QBP02746 253 aa15.22■□□□□ 0.03
HMGA1-202ENST00000347617 ANXA5P08758 320 aa15.22■□□□□ 0.03
HMGA1-202ENST00000347617 ITGB6P18564 788 aa15.22■□□□□ 0.03
HMGA1-202ENST00000347617 PSMA1P25786 263 aaKnown RBP15.22■□□□□ 0.03
HMGA1-202ENST00000347617 ITGB7P26010 798 aa15.22■□□□□ 0.03
HMGA1-202ENST00000347617 CSKP41240 450 aa15.22■□□□□ 0.03
HMGA1-202ENST00000347617 GZMKP49863 264 aa15.22■□□□□ 0.03
HMGA1-202ENST00000347617 AP1S1P61966 158 aa15.22■□□□□ 0.03
HMGA1-202ENST00000347617 MED22Q15528 200 aa15.22■□□□□ 0.03
HMGA1-202ENST00000347617 HSDL2Q6YN16 418 aa15.22■□□□□ 0.03
HMGA1-202ENST00000347617 IDO2Q6ZQW0 420 aa15.22■□□□□ 0.03
HMGA1-202ENST00000347617 ANKRD46Q86W74 232 aa15.22■□□□□ 0.03
HMGA1-202ENST00000347617 CLDN22Q8N7P3 220 aa15.22■□□□□ 0.03
HMGA1-202ENST00000347617 ZC3HAV1LQ96H79 300 aaKnown RBP15.22■□□□□ 0.03
HMGA1-202ENST00000347617 LMLNQ96KR4 655 aa15.22■□□□□ 0.03
HMGA1-202ENST00000347617 CCM2Q9BSQ5 444 aa15.22■□□□□ 0.03
HMGA1-202ENST00000347617 GTPBP2Q9BX10 602 aaKnown RBP15.22■□□□□ 0.03
HMGA1-202ENST00000347617 LMAN2LQ9H0V9 348 aa15.22■□□□□ 0.03
HMGA1-202ENST00000347617 SLC32A1Q9H598 525 aa15.22■□□□□ 0.03
HMGA1-202ENST00000347617 ELOVL6Q9H5J4 265 aa15.22■□□□□ 0.03
HMGA1-202ENST00000347617 THSD1Q9NS62 852 aa15.22■□□□□ 0.03
HMGA1-202ENST00000347617 ABCB8Q9NUT2 735 aa15.22■□□□□ 0.03
HMGA1-202ENST00000347617 TDP1Q9NUW8 608 aa15.22■□□□□ 0.03
HMGA1-202ENST00000347617 MS4A12Q9NXJ0 267 aa15.22■□□□□ 0.03
HMGA1-202ENST00000347617 LHX3Q9UBR4 397 aa15.22■□□□□ 0.03
HMGA1-202ENST00000347617 ERVH48-1M5A8F1 160 aa15.21■□□□□ 0.03
HMGA1-202ENST00000347617 POLR1CO15160 346 aaPredicted RBP15.21■□□□□ 0.03
HMGA1-202ENST00000347617 HCN1O60741 890 aa15.21■□□□□ 0.03
HMGA1-202ENST00000347617 GPX5O75715 221 aa15.21■□□□□ 0.03
HMGA1-202ENST00000347617 CCNB2O95067 398 aa15.21■□□□□ 0.03
HMGA1-202ENST00000347617 GUCA1CO95843 209 aa15.21■□□□□ 0.03
HMGA1-202ENST00000347617 PDYNP01213 254 aa15.21■□□□□ 0.03
HMGA1-202ENST00000347617 IL1AP01583 271 aa15.21■□□□□ 0.03
HMGA1-202ENST00000347617 PTBP1P26599 531 aaKnown RBP eCLIP15.21■□□□□ 0.03
HMGA1-202ENST00000347617 CSTF2P33240 577 aaKnown RBP eCLIP15.21■□□□□ 0.03
HMGA1-202ENST00000347617 IRS1P35568 1242 aa15.21■□□□□ 0.03
HMGA1-202ENST00000347617 HTR2BP41595 481 aa15.21■□□□□ 0.03
HMGA1-202ENST00000347617 RGRP47804 291 aa15.21■□□□□ 0.03
HMGA1-202ENST00000347617 IDH2P48735 452 aaKnown RBP15.21■□□□□ 0.03
HMGA1-202ENST00000347617 SLAMF1Q13291 335 aa15.21■□□□□ 0.03
HMGA1-202ENST00000347617 SLC14A1Q13336 389 aa15.21■□□□□ 0.03
HMGA1-202ENST00000347617 DMC1Q14565 340 aa15.21■□□□□ 0.03
HMGA1-202ENST00000347617 ZNF79Q15937 498 aa15.21■□□□□ 0.03
HMGA1-202ENST00000347617 GLYR1Q49A26 553 aaPredicted RBP15.21■□□□□ 0.03
HMGA1-202ENST00000347617 IFI44LQ53G44 452 aa15.21■□□□□ 0.03
HMGA1-202ENST00000347617 ZBTB2Q8N680 514 aa15.21■□□□□ 0.03
HMGA1-202ENST00000347617 SLC5A8Q8N695 610 aa15.21■□□□□ 0.03
HMGA1-202ENST00000347617 TPD52L3Q96J77 140 aa15.21■□□□□ 0.03
HMGA1-202ENST00000347617 TSSK3Q96PN8 268 aa15.21■□□□□ 0.03
HMGA1-202ENST00000347617 BBS2Q9BXC9 721 aa15.21■□□□□ 0.03
HMGA1-202ENST00000347617 FAM83DQ9H4H8 585 aa15.21■□□□□ 0.03
HMGA1-202ENST00000347617 RANGRFQ9HD47 186 aaPredicted RBP15.21■□□□□ 0.03
HMGA1-202ENST00000347617 PLSCR3Q9NRY6 295 aa15.21■□□□□ 0.03
HMGA1-202ENST00000347617 HCFC1R1Q9NWW0 138 aa15.21■□□□□ 0.03
HMGA1-202ENST00000347617 KCNN3Q9UGI6 736 aa15.21■□□□□ 0.03
HMGA1-202ENST00000347617 MUTYHQ9UIF7 546 aa15.21■□□□□ 0.03
HMGA1-202ENST00000347617 BTNL2Q9UIR0 455 aa15.21■□□□□ 0.03
HMGA1-202ENST00000347617 RAI2Q9Y5P3 530 aa15.21■□□□□ 0.03
HMGA1-202ENST00000347617 HELZP42694 1942 aaKnown RBP15.21■□□□□ 0.03
HMGA1-202ENST00000347617 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.21■□□□□ 0.02
HMGA1-202ENST00000347617 B4DXG7 233 aa15.21■□□□□ 0.02
HMGA1-202ENST00000347617 SCAMP3O14828 347 aaKnown RBP15.21■□□□□ 0.02
HMGA1-202ENST00000347617 SELENOWP63302 87 aa15.21■□□□□ 0.02
HMGA1-202ENST00000347617 SOWAHCQ53LP3 525 aaPredicted RBP15.21■□□□□ 0.02
HMGA1-202ENST00000347617 IQCF2Q8IXL9 164 aa15.21■□□□□ 0.02
HMGA1-202ENST00000347617 LGI4Q8N135 537 aa15.21■□□□□ 0.02
HMGA1-202ENST00000347617 L3MBTL4Q8NA19 623 aa15.21■□□□□ 0.02
HMGA1-202ENST00000347617 IL17RCQ8NAC3 791 aa15.21■□□□□ 0.02
HMGA1-202ENST00000347617 C11orf65Q8NCR3 313 aa15.21■□□□□ 0.02
HMGA1-202ENST00000347617 GPR151Q8TDV0 419 aa15.21■□□□□ 0.02
HMGA1-202ENST00000347617 MSLNLQ96KJ4 702 aa15.21■□□□□ 0.02
HMGA1-202ENST00000347617 ARPC5LQ9BPX5 153 aa15.21■□□□□ 0.02
HMGA1-202ENST00000347617 CIPCQ9C0C6 399 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms