RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 GLULP15104 373 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 IL10P22301 178 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 HNRNPA2B1P22626 353 aaKnown RBP8.82□□□□□ -1
ATG4A-202ENST00000345734 PKLRP30613 574 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 PIK3CBP42338 1070 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 ASMTP46597 345 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 ARL4DP49703 201 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 RAB28P51157 221 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 CCR8P51685 355 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 MC1RQ01726 317 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 KLC1Q07866 573 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 DUOXA1Q1HG43 343 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 AASDHQ4L235 1098 aaPredicted RBP8.82□□□□□ -1
ATG4A-202ENST00000345734 CPTPQ5TA50 214 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 GALNT18Q6P9A2 607 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 C6orf15Q6UXA7 325 aaPredicted RBP8.82□□□□□ -1
ATG4A-202ENST00000345734 MSANTD1Q6ZTZ1 278 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 ZNF551Q7Z340 670 aaPredicted RBP8.82□□□□□ -1
ATG4A-202ENST00000345734 ZNF554Q86TJ5 538 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 PLD3Q8IV08 490 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 KRT78Q8N1N4 520 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 METTL4Q8N3J2 472 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 TMEM132CQ8N3T6 1108 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 FRMD1Q8N878 549 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 ICA1LQ8NDH6 482 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 DENND6BQ8NEG7 585 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 ABHD11Q8NFV4 315 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 OR8J2Q8NGG1 315 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 OR52E1Q8NGJ3 308 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 FIG4Q92562 907 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 UBE2E3Q969T4 207 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 NSMCE2Q96MF7 247 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 GBP5Q96PP8 586 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 SEPHS2Q99611 448 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 DUSP26Q9BV47 211 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 C6orf106Q9H6K1 298 aaPredicted RBP8.82□□□□□ -1
ATG4A-202ENST00000345734 COQ10BQ9H8M1 238 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 PELI2Q9HAT8 420 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 WASH6PQ9NQA3 447 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 MAGEL2Q9UJ55 1249 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 ANAPC2Q9UJX6 822 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 ICKQ9UPZ9 632 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 COL6A3P12111 3177 aa8.82□□□□□ -1
ATG4A-202ENST00000345734 IGKV1-8A0A0C4DH67 115 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 GSTA4O15217 222 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 KCNJ13O60928 360 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 SEMA4FO95754 770 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 GPIP06744 558 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 UQCRBP14927 111 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 ZNF26P17031 533 aaPredicted RBP8.81□□□□□ -1
ATG4A-202ENST00000345734 CKMT2P17540 419 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 HOXD12P35452 270 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 CCT8P50990 548 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 GZMMP51124 257 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 POLE2P56282 527 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 REEP5Q00765 189 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 FOLH1Q04609 750 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 DPY19L1Q2PZI1 675 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 ZNF385BQ569K4 471 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 C10orf62Q5T681 223 aaPredicted RBP8.81□□□□□ -1
ATG4A-202ENST00000345734 IRGCQ6NXR0 463 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 ZNF621Q6ZSS3 439 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 CALHM3Q86XJ0 350 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 CATSPER1Q8NEC5 780 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 TRPV3Q8NET8 790 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 DNAJB8Q8NHS0 232 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.81□□□□□ -1
ATG4A-202ENST00000345734 C16orf78Q8WTQ4 265 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 EME1Q96AY2 570 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 NACC2Q96BF6 587 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 WDR92Q96MX6 357 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 CCDC115Q96NT0 180 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 PANX1Q96RD7 426 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 SLC29A1Q99808 456 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 AIF1LQ9BQI0 150 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 CENPKQ9BS16 269 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 PCBD2Q9H0N5 130 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 TMEM168Q9H0V1 697 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 RHBGQ9H310 441 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 SH3BP4Q9P0V3 963 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 REV1Q9UBZ9 1251 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 PFDN2Q9UHV9 154 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 PCDHB10Q9UN67 800 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 TRBV23OR9-2A0A075B6M9 112 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 TMEM265A0A087WTH1 108 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 ELOVL7A1L3X0 281 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 SAC3D1A6NKF1 404 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 RTCAO00442 366 aaKnown RBP8.81□□□□□ -1
ATG4A-202ENST00000345734 TXNDC9O14530 226 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 HNRNPRO43390 633 aaKnown RBP8.81□□□□□ -1
ATG4A-202ENST00000345734 LCMT2O60294 686 aaKnown RBP8.81□□□□□ -1
ATG4A-202ENST00000345734 KDM1AO60341 852 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 RASGRP1O95267 797 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 ANXA6P08133 673 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 UBTFL6P0CB48 400 aaPredicted RBP8.81□□□□□ -1
ATG4A-202ENST00000345734 CHRNB1P11230 501 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 SRFP11831 508 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 PTX3P26022 381 aaPredicted RBP8.81□□□□□ -1
ATG4A-202ENST00000345734 HPCAL1P37235 193 aa8.81□□□□□ -1
ATG4A-202ENST00000345734 TAS2R50P59544 299 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms