RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 CCDC88CQ9P219 2028 aa20.46■□□□□ 0.87
CCDC38-201ENST00000344280 M0R129 80 aa20.45■□□□□ 0.86
CCDC38-201ENST00000344280 MYOGP15173 224 aa20.45■□□□□ 0.86
CCDC38-201ENST00000344280 TMC5Q6UXY8 1006 aa20.45■□□□□ 0.86
CCDC38-201ENST00000344280 CENPSQ8N2Z9 138 aa20.45■□□□□ 0.86
CCDC38-201ENST00000344280 OXR1Q8N573 874 aa20.45■□□□□ 0.86
CCDC38-201ENST00000344280 ZNF514Q96K75 400 aaPredicted RBP20.45■□□□□ 0.86
CCDC38-201ENST00000344280 CXorf36Q9H7Y0 433 aa20.45■□□□□ 0.86
CCDC38-201ENST00000344280 CUEDC1Q9NWM3 386 aaPredicted RBP20.45■□□□□ 0.86
CCDC38-201ENST00000344280 DEC1Q9P2X7 70 aa20.45■□□□□ 0.86
CCDC38-201ENST00000344280 TAC3Q9UHF0 121 aa20.45■□□□□ 0.86
CCDC38-201ENST00000344280 SLC6A14Q9UN76 642 aa20.45■□□□□ 0.86
CCDC38-201ENST00000344280 GPR34Q9UPC5 381 aa20.45■□□□□ 0.86
CCDC38-201ENST00000344280 SNX8Q9Y5X2 465 aa20.45■□□□□ 0.86
CCDC38-201ENST00000344280 NINQ8N4C6 2090 aa20.45■□□□□ 0.86
CCDC38-201ENST00000344280 OR2A25A4D2G3 310 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 PLPP1O14494 284 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 PCDH17O14917 1159 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 PI15O43692 258 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 RECKO95980 971 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 POU2F1P14859 743 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 GGT2P36268 569 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 ST13P50502 369 aaKnown RBP20.44■□□□□ 0.86
CCDC38-201ENST00000344280 PHEXP78562 749 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 FADDQ13158 208 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 GANABQ14697 944 aaKnown RBP20.44■□□□□ 0.86
CCDC38-201ENST00000344280 NUMA1Q14980 2115 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 FAM78AQ5JUQ0 283 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 C10orf62Q5T681 223 aaPredicted RBP20.44■□□□□ 0.86
CCDC38-201ENST00000344280 TMEM236Q5W0B7 351 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 TRIM40Q6P9F5 258 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 ERN2Q76MJ5 926 aaKnown RBP20.44■□□□□ 0.86
CCDC38-201ENST00000344280 SLC9B2Q86UD5 537 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 LGI4Q8N135 537 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 ANKRD53Q8N9V6 530 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 ZNF717Q9BY31 904 aaPredicted RBP20.44■□□□□ 0.86
CCDC38-201ENST00000344280 MIEF1Q9NQG6 463 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 C5AR2Q9P296 337 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 AP1M2Q9Y6Q5 423 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 DOCK9Q9BZ29 2069 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 LINC01553A4QN01 128 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 SLC22A1O15245 554 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 PSMB5P28074 263 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 TGFBR2P37173 567 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 P2RY2P41231 377 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 SLC19A1P41440 591 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 NUDT6P53370 316 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 FPGSQ05932 587 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 RBBP4Q09028 425 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 MICAQ29983 383 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 CCDC80Q76M96 950 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 SNX29P2Q8IUI4 249 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 TMCO5AQ8N6Q1 288 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 TFGQ92734 400 aaPredicted RBP20.44■□□□□ 0.86
CCDC38-201ENST00000344280 ZNF347Q96SE7 839 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 TMEM245Q9H330 911 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 CCNB1IP1Q9NPC3 277 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 DNAAF2Q9NVR5 837 aaKnown RBP20.44■□□□□ 0.86
CCDC38-201ENST00000344280 RHCGQ9UBD6 479 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 RAB23Q9ULC3 237 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 PCDHGA2Q9Y5H1 932 aa20.44■□□□□ 0.86
CCDC38-201ENST00000344280 MUC22E2RYF6 1773 aaPredicted RBP20.44■□□□□ 0.86
CCDC38-201ENST00000344280 GOLGA4Q13439 2230 aaKnown RBP20.44■□□□□ 0.86
CCDC38-201ENST00000344280 FEZF1A0PJY2 475 aa20.43■□□□□ 0.86
CCDC38-201ENST00000344280 SULT1C4O75897 302 aa20.43■□□□□ 0.86
CCDC38-201ENST00000344280 ZNF12P17014 697 aa20.43■□□□□ 0.86
CCDC38-201ENST00000344280 PTX3P26022 381 aaPredicted RBP20.43■□□□□ 0.86
CCDC38-201ENST00000344280 IDH2P48735 452 aaKnown RBP20.43■□□□□ 0.86
CCDC38-201ENST00000344280 PCBP3P57721 371 aaKnown RBP20.43■□□□□ 0.86
CCDC38-201ENST00000344280 DUSP7Q16829 419 aa20.43■□□□□ 0.86
CCDC38-201ENST00000344280 CRB2Q5IJ48 1285 aa20.43■□□□□ 0.86
CCDC38-201ENST00000344280 TMEM240Q5SV17 173 aa20.43■□□□□ 0.86
CCDC38-201ENST00000344280 PDZD3Q86UT5 571 aa20.43■□□□□ 0.86
CCDC38-201ENST00000344280 P3H2Q8IVL5 708 aa20.43■□□□□ 0.86
CCDC38-201ENST00000344280 SVOPQ8N4V2 548 aa20.43■□□□□ 0.86
CCDC38-201ENST00000344280 RAD51AP1Q96B01 352 aa20.43■□□□□ 0.86
CCDC38-201ENST00000344280 COX4I2Q96KJ9 171 aa20.43■□□□□ 0.86
CCDC38-201ENST00000344280 F2RL3Q96RI0 385 aa20.43■□□□□ 0.86
CCDC38-201ENST00000344280 COPS4Q9BT78 406 aa20.43■□□□□ 0.86
CCDC38-201ENST00000344280 BTBD2Q9BX70 525 aa20.43■□□□□ 0.86
CCDC38-201ENST00000344280 RSPO3Q9BXY4 272 aaPredicted RBP20.43■□□□□ 0.86
CCDC38-201ENST00000344280 NECTIN3Q9NQS3 549 aa20.43■□□□□ 0.86
CCDC38-201ENST00000344280 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.43■□□□□ 0.86
CCDC38-201ENST00000344280 M0R3G1 203 aa20.43■□□□□ 0.86
CCDC38-201ENST00000344280 OCA2Q04671 838 aa20.43■□□□□ 0.86
CCDC38-201ENST00000344280 SYT16Q17RD7 645 aa20.43■□□□□ 0.86
CCDC38-201ENST00000344280 TMEM52BQ4KMG9 183 aa20.43■□□□□ 0.86
CCDC38-201ENST00000344280 RPS26P11Q5JNZ5 115 aaPredicted RBP20.43■□□□□ 0.86
CCDC38-201ENST00000344280 LCTLQ6UWM7 567 aa20.43■□□□□ 0.86
CCDC38-201ENST00000344280 HEATR4Q86WZ0 1026 aa20.43■□□□□ 0.86
CCDC38-201ENST00000344280 SETD7Q8WTS6 366 aaKnown RBP20.43■□□□□ 0.86
CCDC38-201ENST00000344280 IPCEF1Q8WWN9 437 aaPredicted RBP20.43■□□□□ 0.86
CCDC38-201ENST00000344280 SMG7Q92540 1137 aaKnown RBP20.43■□□□□ 0.86
CCDC38-201ENST00000344280 PALMDQ9NP74 551 aa20.43■□□□□ 0.86
CCDC38-201ENST00000344280 THSD1Q9NS62 852 aa20.43■□□□□ 0.86
CCDC38-201ENST00000344280 ACER3Q9NUN7 267 aa20.43■□□□□ 0.86
CCDC38-201ENST00000344280 ERGIC3Q9Y282 383 aa20.43■□□□□ 0.86
CCDC38-201ENST00000344280 VEGFDO43915 354 aa20.42■□□□□ 0.86
CCDC38-201ENST00000344280 NADKO95544 446 aaPredicted RBP20.42■□□□□ 0.86
CCDC38-201ENST00000344280 FUCA1P04066 466 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms