RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 IFT88Q13099 833 aa14.37□□□□□ -0.11
UBE3B-201ENST00000340074 PCLAFQ15004 111 aa14.37□□□□□ -0.11
UBE3B-201ENST00000340074 TMEM205Q6UW68 189 aa14.37□□□□□ -0.11
UBE3B-201ENST00000340074 LANCL3Q6ZV70 420 aa14.37□□□□□ -0.11
UBE3B-201ENST00000340074 C10orf107Q8IVU9 208 aa14.37□□□□□ -0.11
UBE3B-201ENST00000340074 CLEC1AQ8NC01 280 aa14.37□□□□□ -0.11
UBE3B-201ENST00000340074 TCP10LQ8TDR4 215 aa14.37□□□□□ -0.11
UBE3B-201ENST00000340074 METTL21AQ8WXB1 218 aa14.37□□□□□ -0.11
UBE3B-201ENST00000340074 VPS50Q96JG6 964 aa14.37□□□□□ -0.11
UBE3B-201ENST00000340074 FAM111AQ96PZ2 611 aa14.37□□□□□ -0.11
UBE3B-201ENST00000340074 TBCDQ9BTW9 1192 aa14.37□□□□□ -0.11
UBE3B-201ENST00000340074 SORBS1Q9BX66 1292 aaKnown RBP14.37□□□□□ -0.11
UBE3B-201ENST00000340074 FARSBQ9NSD9 589 aaKnown RBP14.37□□□□□ -0.11
UBE3B-201ENST00000340074 SENP1Q9P0U3 644 aa14.37□□□□□ -0.11
UBE3B-201ENST00000340074 TRPS1Q9UHF7 1281 aa14.37□□□□□ -0.11
UBE3B-201ENST00000340074 MID2Q9UJV3 735 aa14.37□□□□□ -0.11
UBE3B-201ENST00000340074 COL6A6A6NMZ7 2263 aa14.37□□□□□ -0.11
UBE3B-201ENST00000340074 MKRN2OSH3BPM6 223 aa14.36□□□□□ -0.11
UBE3B-201ENST00000340074 PLPP1O14494 284 aa14.36□□□□□ -0.11
UBE3B-201ENST00000340074 PCDH17O14917 1159 aa14.36□□□□□ -0.11
UBE3B-201ENST00000340074 CYC1P08574 325 aa14.36□□□□□ -0.11
UBE3B-201ENST00000340074 SFTPCP11686 197 aa14.36□□□□□ -0.11
UBE3B-201ENST00000340074 COX6A1P12074 109 aa14.36□□□□□ -0.11
UBE3B-201ENST00000340074 JAK1P23458 1154 aa14.36□□□□□ -0.11
UBE3B-201ENST00000340074 ATP5A1P25705 553 aaKnown RBP14.36□□□□□ -0.11
UBE3B-201ENST00000340074 RAP1GDS1P52306 607 aa14.36□□□□□ -0.11
UBE3B-201ENST00000340074 LIM2P55344 173 aa14.36□□□□□ -0.11
UBE3B-201ENST00000340074 AP5B1Q2VPB7 878 aa14.36□□□□□ -0.11
UBE3B-201ENST00000340074 SGO1Q5FBB7 561 aa14.36□□□□□ -0.11
UBE3B-201ENST00000340074 LIPMQ5VYY2 423 aa14.36□□□□□ -0.11
UBE3B-201ENST00000340074 OR4C11Q6IEV9 310 aa14.36□□□□□ -0.11
UBE3B-201ENST00000340074 LRIG3Q6UXM1 1119 aa14.36□□□□□ -0.11
UBE3B-201ENST00000340074 GPRIN3Q6ZVF9 776 aa14.36□□□□□ -0.11
UBE3B-201ENST00000340074 EXOC3L1Q86VI1 746 aa14.36□□□□□ -0.11
UBE3B-201ENST00000340074 CDYL2Q8N8U2 506 aa14.36□□□□□ -0.11
UBE3B-201ENST00000340074 ACOT4Q8N9L9 421 aa14.36□□□□□ -0.11
UBE3B-201ENST00000340074 PLPP5Q8NEB5 264 aa14.36□□□□□ -0.11
UBE3B-201ENST00000340074 FDCSPQ8NFU4 85 aa14.36□□□□□ -0.11
UBE3B-201ENST00000340074 C9orf43Q8TAL5 461 aaPredicted RBP14.36□□□□□ -0.11
UBE3B-201ENST00000340074 RGMAQ96B86 450 aa14.36□□□□□ -0.11
UBE3B-201ENST00000340074 CENPKQ9BS16 269 aa14.36□□□□□ -0.11
UBE3B-201ENST00000340074 SLC25A23Q9BV35 468 aa14.36□□□□□ -0.11
UBE3B-201ENST00000340074 ROGDIQ9GZN7 287 aa14.36□□□□□ -0.11
UBE3B-201ENST00000340074 ELOVL6Q9H5J4 265 aa14.36□□□□□ -0.11
UBE3B-201ENST00000340074 ATP13A2Q9NQ11 1180 aa14.36□□□□□ -0.11
UBE3B-201ENST00000340074 PSD3Q9NYI0 1048 aa14.36□□□□□ -0.11
UBE3B-201ENST00000340074 DAPP1Q9UN19 280 aa14.36□□□□□ -0.11
UBE3B-201ENST00000340074 STK38LQ9Y2H1 464 aa14.36□□□□□ -0.11
UBE3B-201ENST00000340074 CROCCQ5TZA2 2017 aa14.35□□□□□ -0.11
UBE3B-201ENST00000340074 TLN1Q9Y490 2541 aaKnown RBP14.35□□□□□ -0.11
UBE3B-201ENST00000340074 CPAMD8Q8IZJ3 1885 aa14.35□□□□□ -0.11
UBE3B-201ENST00000340074 LOC102723996A0A087X1L8 192 aa14.35□□□□□ -0.11
UBE3B-201ENST00000340074 IGHV1-45A0A0A0MS14 117 aa14.35□□□□□ -0.11
UBE3B-201ENST00000340074 A0A1W2PQ72 361 aa14.35□□□□□ -0.11
UBE3B-201ENST00000340074 K7EM74 188 aa14.35□□□□□ -0.11
UBE3B-201ENST00000340074 UBFD1O14562 309 aaKnown RBP14.35□□□□□ -0.11
UBE3B-201ENST00000340074 TYROBPO43914 113 aa14.35□□□□□ -0.11
UBE3B-201ENST00000340074 CEACAM4O75871 244 aa14.35□□□□□ -0.11
UBE3B-201ENST00000340074 HPP00738 406 aa14.35□□□□□ -0.11
UBE3B-201ENST00000340074 PDYNP01213 254 aa14.35□□□□□ -0.11
UBE3B-201ENST00000340074 HIST1H1TP22492 207 aaPredicted RBP14.35□□□□□ -0.11
UBE3B-201ENST00000340074 SSR2P43308 183 aa14.35□□□□□ -0.11
UBE3B-201ENST00000340074 RAB38P57729 211 aa14.35□□□□□ -0.11
UBE3B-201ENST00000340074 BTG2P78543 158 aa14.35□□□□□ -0.11
UBE3B-201ENST00000340074 AIMP2Q13155 320 aaKnown RBP14.35□□□□□ -0.11
UBE3B-201ENST00000340074 CUL3Q13618 768 aa14.35□□□□□ -0.11
UBE3B-201ENST00000340074 RAPSNQ13702 412 aa14.35□□□□□ -0.11
UBE3B-201ENST00000340074 ABRAXAS2Q15018 415 aa14.35□□□□□ -0.11
UBE3B-201ENST00000340074 NSDHLQ15738 373 aa14.35□□□□□ -0.11
UBE3B-201ENST00000340074 TNFAIP8L3Q5GJ75 292 aa14.35□□□□□ -0.11
UBE3B-201ENST00000340074 CFAP157Q5JU67 520 aa14.35□□□□□ -0.11
UBE3B-201ENST00000340074 TCHHL1Q5QJ38 904 aaPredicted RBP14.35□□□□□ -0.11
UBE3B-201ENST00000340074 C10orf62Q5T681 223 aaPredicted RBP14.35□□□□□ -0.11
UBE3B-201ENST00000340074 FRMD7Q6ZUT3 714 aa14.35□□□□□ -0.11
UBE3B-201ENST00000340074 NDUFAF7Q7L592 441 aa14.35□□□□□ -0.11
UBE3B-201ENST00000340074 CPEB2Q7Z5Q1 589 aaKnown RBP14.35□□□□□ -0.11
UBE3B-201ENST00000340074 CROCCP2Q86T23 111 aa14.35□□□□□ -0.11
UBE3B-201ENST00000340074 GALNT16Q8N428 558 aa14.35□□□□□ -0.11
UBE3B-201ENST00000340074 MYRIPQ8NFW9 859 aa14.35□□□□□ -0.11
UBE3B-201ENST00000340074 AGAP11Q8TF27 550 aa14.35□□□□□ -0.11
UBE3B-201ENST00000340074 SELENOMQ8WWX9 145 aa14.35□□□□□ -0.11
UBE3B-201ENST00000340074 TSLPQ969D9 159 aa14.35□□□□□ -0.11
UBE3B-201ENST00000340074 SERPINI1Q99574 410 aa14.35□□□□□ -0.11
UBE3B-201ENST00000340074 ZNF700Q9H0M5 742 aa14.35□□□□□ -0.11
UBE3B-201ENST00000340074 SLC25A18Q9H1K4 315 aa14.35□□□□□ -0.11
UBE3B-201ENST00000340074 ZNF160Q9HCG1 818 aa14.35□□□□□ -0.11
UBE3B-201ENST00000340074 ZNF71Q9NQZ8 489 aaPredicted RBP14.35□□□□□ -0.11
UBE3B-201ENST00000340074 PPT2Q9UMR5 302 aa14.35□□□□□ -0.11
UBE3B-201ENST00000340074 SNX6Q9UNH7 406 aa14.35□□□□□ -0.11
UBE3B-201ENST00000340074 TP53TG5Q9Y2B4 290 aa14.35□□□□□ -0.11
UBE3B-201ENST00000340074 NSG1A0A0A6YYJ2 146 aa14.34□□□□□ -0.11
UBE3B-201ENST00000340074 IGHV3-20A0A0C4DH32 117 aa14.34□□□□□ -0.11
UBE3B-201ENST00000340074 EIF4E1BA6NMX2 242 aaKnown RBP14.34□□□□□ -0.11
UBE3B-201ENST00000340074 CTIFO43310 598 aaKnown RBP14.34□□□□□ -0.11
UBE3B-201ENST00000340074 PRMT3O60678 531 aa14.34□□□□□ -0.11
UBE3B-201ENST00000340074 SCELO95171 688 aa14.34□□□□□ -0.11
UBE3B-201ENST00000340074 ESRRBO95718 433 aa14.34□□□□□ -0.11
UBE3B-201ENST00000340074 NR1D1P20393 614 aa14.34□□□□□ -0.11
UBE3B-201ENST00000340074 MAOAP21397 527 aa14.34□□□□□ -0.11
UBE3B-201ENST00000340074 ALDH3A1P30838 453 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms