RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 ZNF730Q6ZMV8 503 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 MSANTD1Q6ZTZ1 278 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 SCD5Q86SK9 330 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 SPPL2AQ8TCT8 520 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 NELL1Q92832 810 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 GTPBP3Q969Y2 492 aaKnown RBP9.02□□□□□ -0.97
NECAP1-201ENST00000339754 MYLPFQ96A32 169 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 WBP1Q96G27 269 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 KATNB1Q9BVA0 655 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 DPCDQ9BVM2 203 aaPredicted RBP9.02□□□□□ -0.97
NECAP1-201ENST00000339754 ABCG8Q9H221 673 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 SLC28A3Q9HAS3 691 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 SLCO1C1Q9NYB5 712 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 SNX11Q9Y5W9 270 aa9.02□□□□□ -0.97
NECAP1-201ENST00000339754 MOXD2PA6NHM9 499 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 PCP4L1A6NKN8 68 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 MAGEB17A8MXT2 336 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 H3BRB1 525 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 YY2O15391 372 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 TREHO43280 583 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 TSPAN3O60637 253 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 IFNA16P05015 189 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 C1SP09871 688 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 HLA-EP13747 358 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 PTX3P26022 381 aaPredicted RBP9.01□□□□□ -0.97
NECAP1-201ENST00000339754 KIR3DL1P43629 444 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 BTG1P62324 171 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 BTN1A1Q13410 526 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 FGFBP1Q14512 234 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 ZMYND11Q15326 602 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 TAF1AQ15573 450 aaPredicted RBP9.01□□□□□ -0.97
NECAP1-201ENST00000339754 LINC00518Q8N0U6 118 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 PROKR2Q8NFJ6 384 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 OR7D4Q8NG98 312 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 OR9Q1Q8NGQ5 310 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.01□□□□□ -0.971e-8■■■■■ 31.4
NECAP1-201ENST00000339754 KLHL6Q8WZ60 621 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 RBPMSQ93062 196 aaKnown RBP9.01□□□□□ -0.97
NECAP1-201ENST00000339754 MAL2Q969L2 176 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 FBXW5Q969U6 566 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 CREB3L1Q96BA8 519 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 MTERF3Q96E29 417 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 RBP7Q96R05 134 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 IL4I1Q96RQ9 567 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 FAM129BQ96TA1 746 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 MAPKAP1Q9BPZ7 522 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 MED18Q9BUE0 208 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 KATNAL1Q9BW62 490 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 ZYG11BQ9C0D3 744 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 P2RY12Q9H244 342 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 MROH8Q9H579 483 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 RANBP3Q9H6Z4 567 aaPredicted RBP9.01□□□□□ -0.97
NECAP1-201ENST00000339754 KCMF1Q9P0J7 381 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 MALT1Q9UDY8 824 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 RAI2Q9Y5P3 530 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 FKBP7Q9Y680 259 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 COMMD10Q9Y6G5 202 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 PLXNB2O15031 1838 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 PI15O43692 258 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 DARSP14868 501 aaKnown RBP9.01□□□□□ -0.97
NECAP1-201ENST00000339754 SMPD1P17405 629 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 CTPS1P17812 591 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 MC4RP32245 332 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 ACVRL1P37023 503 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 OR1E2P47887 323 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 LIMS1P48059 325 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 EVX1P49640 407 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 STK19P49842 368 aaPredicted RBP9.01□□□□□ -0.97
NECAP1-201ENST00000339754 CRISP1P54107 249 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 EPHA5P54756 1037 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 CAV3P56539 151 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 SPIBQ01892 262 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 SERINC3Q13530 473 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 LGALSLQ3ZCW2 172 aaPredicted RBP9.01□□□□□ -0.97
NECAP1-201ENST00000339754 DGKKQ5KSL6 1271 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 MEDAGQ5VYS4 303 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 TMIGD1Q6UXZ0 262 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 GLT6D1Q7Z4J2 308 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 TMEM86AQ8N2M4 240 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 OR11H7Q8NGC8 314 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 OR52H1Q8NGJ2 320 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 TMEM163Q8TC26 289 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 UCN3Q969E3 161 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 TMEM203Q969S6 136 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 TRIM62Q9BVG3 475 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 PRR14Q9BWN1 585 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 MND1Q9BWT6 205 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 FOLH1BQ9HBA9 442 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 COMMD3Q9UBI1 195 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 FKBPLQ9UIM3 349 aa9.01□□□□□ -0.97
NECAP1-201ENST00000339754 SGK494L7N484 410 aa9□□□□□ -0.97
NECAP1-201ENST00000339754 KHNYNO15037 678 aaKnown RBP9□□□□□ -0.97
NECAP1-201ENST00000339754 HPGDSO60760 199 aa9□□□□□ -0.97
NECAP1-201ENST00000339754 CELF2O95319 508 aaKnown RBP9□□□□□ -0.97
NECAP1-201ENST00000339754 CPSF4O95639 269 aaKnown RBP9□□□□□ -0.97
NECAP1-201ENST00000339754 CHRM5P08912 532 aaPredicted RBP9□□□□□ -0.97
NECAP1-201ENST00000339754 GBX2P52951 348 aaPredicted RBP9□□□□□ -0.97
NECAP1-201ENST00000339754 SNRPGP62308 76 aaKnown RBP9□□□□□ -0.97
NECAP1-201ENST00000339754 PPP3R1P63098 170 aa9□□□□□ -0.97
NECAP1-201ENST00000339754 CPSF6Q16630 551 aaKnown RBP eCLIP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms