RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 TRIM40Q6P9F5 258 aa18.15■□□□□ 0.5
ITGA4-202ENST00000339307 NCCRP1Q6ZVX7 275 aaPredicted RBP18.15■□□□□ 0.5
ITGA4-202ENST00000339307 DERL2Q9GZP9 239 aa18.15■□□□□ 0.5
ITGA4-202ENST00000339307 REXO4Q9GZR2 422 aaKnown RBP18.15■□□□□ 0.5
ITGA4-202ENST00000339307 SMYD2Q9NRG4 433 aa18.15■□□□□ 0.5
ITGA4-202ENST00000339307 DNAJC11Q9NVH1 559 aa18.15■□□□□ 0.5
ITGA4-202ENST00000339307 MRPS33Q9Y291 106 aaKnown RBP18.15■□□□□ 0.5
ITGA4-202ENST00000339307 ZNF835Q9Y2P0 537 aa18.15■□□□□ 0.5
ITGA4-202ENST00000339307 KLF13Q9Y2Y9 288 aaPredicted RBP18.15■□□□□ 0.5
ITGA4-202ENST00000339307 MEMO1Q9Y316 297 aa18.15■□□□□ 0.5
ITGA4-202ENST00000339307 MYOCOSA0A1B0GUC4 107 aa18.15■□□□□ 0.5
ITGA4-202ENST00000339307 KLRC4-KLRK1H3BQV0 150 aa18.15■□□□□ 0.5
ITGA4-202ENST00000339307 PRRG2O14669 202 aa18.15■□□□□ 0.5
ITGA4-202ENST00000339307 TP73O15350 636 aa18.15■□□□□ 0.5
ITGA4-202ENST00000339307 CDC40O60508 579 aaKnown RBP eCLIP18.15■□□□□ 0.5
ITGA4-202ENST00000339307 ITGA10O75578 1167 aa18.15■□□□□ 0.5
ITGA4-202ENST00000339307 PPP2R1BP30154 601 aa18.15■□□□□ 0.5
ITGA4-202ENST00000339307 HPDP32754 393 aaPredicted RBP18.15■□□□□ 0.5
ITGA4-202ENST00000339307 RAB38P57729 211 aa18.15■□□□□ 0.5
ITGA4-202ENST00000339307 BMPR2Q13873 1038 aa18.15■□□□□ 0.5
ITGA4-202ENST00000339307 SIAH3Q8IW03 269 aa18.15■□□□□ 0.5
ITGA4-202ENST00000339307 SULF2Q8IWU5 870 aa18.15■□□□□ 0.5
ITGA4-202ENST00000339307 CYP4Z2PQ8N1L4 340 aa18.15■□□□□ 0.5
ITGA4-202ENST00000339307 TCAIMQ8N3R3 496 aa18.15■□□□□ 0.5
ITGA4-202ENST00000339307 ADAMTS18Q8TE60 1221 aa18.15■□□□□ 0.5
ITGA4-202ENST00000339307 AGAP11Q8TF27 550 aa18.15■□□□□ 0.5
ITGA4-202ENST00000339307 NCLNQ969V3 563 aa18.15■□□□□ 0.5
ITGA4-202ENST00000339307 NPLQ9BXD5 320 aaPredicted RBP18.15■□□□□ 0.5
ITGA4-202ENST00000339307 ERVK-11Q9UQG0 969 aa18.15■□□□□ 0.5
ITGA4-202ENST00000339307 CXorf49A8MYA2 514 aaPredicted RBP18.14■□□□□ 0.49
ITGA4-202ENST00000339307 KIF2AO00139 706 aaPredicted RBP18.14■□□□□ 0.49
ITGA4-202ENST00000339307 CDK2AP1O14519 115 aa18.14■□□□□ 0.49
ITGA4-202ENST00000339307 TAPBPO15533 448 aa18.14■□□□□ 0.49
ITGA4-202ENST00000339307 CCNT2O60583 730 aaKnown RBP18.14■□□□□ 0.49
ITGA4-202ENST00000339307 STK16O75716 305 aa18.14■□□□□ 0.49
ITGA4-202ENST00000339307 STMN1P16949 149 aa18.14■□□□□ 0.49
ITGA4-202ENST00000339307 TRHRP34981 398 aaPredicted RBP18.14■□□□□ 0.49
ITGA4-202ENST00000339307 HSD17B7P56937 341 aa18.14■□□□□ 0.49
ITGA4-202ENST00000339307 GPR85P60893 370 aa18.14■□□□□ 0.49
ITGA4-202ENST00000339307 HIST2H2ACQ16777 129 aaPredicted RBP18.14■□□□□ 0.49
ITGA4-202ENST00000339307 RNFT1Q5M7Z0 435 aa18.14■□□□□ 0.49
ITGA4-202ENST00000339307 HIST2H2AA3Q6FI13 130 aa18.14■□□□□ 0.49
ITGA4-202ENST00000339307 Q6ZPB1 254 aaPredicted RBP18.14■□□□□ 0.49
ITGA4-202ENST00000339307 ZNF227Q86WZ6 799 aa18.14■□□□□ 0.49
ITGA4-202ENST00000339307 CTAGE3PQ8IX95 158 aa18.14■□□□□ 0.49
ITGA4-202ENST00000339307 APCDD1LQ8NCL9 501 aa18.14■□□□□ 0.49
ITGA4-202ENST00000339307 VMP1Q96GC9 406 aa18.14■□□□□ 0.49
ITGA4-202ENST00000339307 TMEM79Q9BSE2 394 aa18.14■□□□□ 0.49
ITGA4-202ENST00000339307 LIN28AQ9H9Z2 209 aaKnown RBP18.14■□□□□ 0.49
ITGA4-202ENST00000339307 GPRC5BQ9NZH0 403 aa18.14■□□□□ 0.49
ITGA4-202ENST00000339307 RNF14Q9UBS8 474 aa18.14■□□□□ 0.49
ITGA4-202ENST00000339307 RNF112Q9ULX5 631 aa18.14■□□□□ 0.49
ITGA4-202ENST00000339307 PEX1O43933 1283 aa18.13■□□□□ 0.49
ITGA4-202ENST00000339307 CLEC3AO75596 197 aa18.13■□□□□ 0.49
ITGA4-202ENST00000339307 TNNI3P19429 210 aa18.13■□□□□ 0.49
ITGA4-202ENST00000339307 CERS1P27544 350 aa18.13■□□□□ 0.49
ITGA4-202ENST00000339307 GSTM2P28161 218 aa18.13■□□□□ 0.49
ITGA4-202ENST00000339307 PTGER1P34995 402 aa18.13■□□□□ 0.49
ITGA4-202ENST00000339307 HNRNPFP52597 415 aaKnown RBP18.13■□□□□ 0.49
ITGA4-202ENST00000339307 MTTPP55157 894 aa18.13■□□□□ 0.49
ITGA4-202ENST00000339307 TGM3Q08188 693 aa18.13■□□□□ 0.49
ITGA4-202ENST00000339307 ILF2Q12905 390 aaKnown RBP18.13■□□□□ 0.49
ITGA4-202ENST00000339307 PDK4Q16654 411 aa18.13■□□□□ 0.49
ITGA4-202ENST00000339307 SULT1C3Q6IMI6 304 aa18.13■□□□□ 0.49
ITGA4-202ENST00000339307 ADNP2Q6IQ32 1131 aa18.13■□□□□ 0.49
ITGA4-202ENST00000339307 GDF7Q7Z4P5 450 aa18.13■□□□□ 0.49
ITGA4-202ENST00000339307 TMEM52Q8NDY8 209 aa18.13■□□□□ 0.49
ITGA4-202ENST00000339307 OR2L5Q8NG80 312 aa18.13■□□□□ 0.49
ITGA4-202ENST00000339307 PHF12Q96QT6 1004 aa18.13■□□□□ 0.49
ITGA4-202ENST00000339307 SERINC2Q96SA4 455 aa18.13■□□□□ 0.49
ITGA4-202ENST00000339307 NT5DC2Q9H857 520 aa18.13■□□□□ 0.49
ITGA4-202ENST00000339307 CLCA3PQ9Y6N3 262 aa18.13■□□□□ 0.49
ITGA4-202ENST00000339307 HS6ST1O60243 411 aa18.12■□□□□ 0.49
ITGA4-202ENST00000339307 SH3BGRLO75368 114 aa18.12■□□□□ 0.49
ITGA4-202ENST00000339307 ZFAND5O76080 213 aa18.12■□□□□ 0.49
ITGA4-202ENST00000339307 PDE9AO76083 593 aa18.12■□□□□ 0.49
ITGA4-202ENST00000339307 CLDN14O95500 239 aa18.12■□□□□ 0.49
ITGA4-202ENST00000339307 TPOP07202 933 aa18.12■□□□□ 0.49
ITGA4-202ENST00000339307 CD1DP15813 335 aa18.12■□□□□ 0.49
ITGA4-202ENST00000339307 SSR4P51571 173 aa18.12■□□□□ 0.49
ITGA4-202ENST00000339307 LIM2P55344 173 aa18.12■□□□□ 0.49
ITGA4-202ENST00000339307 ATP6V0D1P61421 351 aa18.12■□□□□ 0.49
ITGA4-202ENST00000339307 STX4Q12846 297 aa18.12■□□□□ 0.49
ITGA4-202ENST00000339307 DOC2AQ14183 400 aa18.12■□□□□ 0.49
ITGA4-202ENST00000339307 RCN2Q14257 317 aa18.12■□□□□ 0.49
ITGA4-202ENST00000339307 OR4D1Q15615 310 aa18.12■□□□□ 0.49
ITGA4-202ENST00000339307 C16orf47Q6ZP98 133 aaPredicted RBP18.12■□□□□ 0.49
ITGA4-202ENST00000339307 C3orf62Q6ZUJ4 267 aa18.12■□□□□ 0.49
ITGA4-202ENST00000339307 RAPH1Q70E73 1250 aa18.12■□□□□ 0.49
ITGA4-202ENST00000339307 DOLPP1Q86YN1 238 aa18.12■□□□□ 0.49
ITGA4-202ENST00000339307 SCUBE1Q8IWY4 988 aa18.12■□□□□ 0.49
ITGA4-202ENST00000339307 ZNF595Q8IYB9 648 aa18.12■□□□□ 0.49
ITGA4-202ENST00000339307 C17orf53Q8N3J3 647 aaPredicted RBP18.12■□□□□ 0.49
ITGA4-202ENST00000339307 POGLUT1Q8NBL1 392 aa18.12■□□□□ 0.49
ITGA4-202ENST00000339307 MTFMTQ96DP5 389 aaKnown RBP18.12■□□□□ 0.49
ITGA4-202ENST00000339307 PTCD3Q96EY7 689 aaKnown RBP18.12■□□□□ 0.49
ITGA4-202ENST00000339307 F2RL3Q96RI0 385 aa18.12■□□□□ 0.49
ITGA4-202ENST00000339307 CPNE1Q99829 537 aa18.12■□□□□ 0.49
ITGA4-202ENST00000339307 TRIM45Q9H8W5 580 aaPredicted RBP18.12■□□□□ 0.49
ITGA4-202ENST00000339307 TIMMDC1Q9NPL8 285 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms