RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 ITGA2P17301 1181 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 KRT33BQ14525 404 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 SPHARQ15513 63 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 CAPN13Q6MZZ7 669 aaPredicted RBP13.57□□□□□ -0.24
PCDH8-201ENST00000338862 CRTC1Q6UUV9 634 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 DNAJB7Q7Z6W7 309 aaPredicted RBP13.57□□□□□ -0.24
PCDH8-201ENST00000338862 SLC9A6Q92581 669 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 HDHD5Q9BXW7 423 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.57□□□□□ -0.24
PCDH8-201ENST00000338862 P2RY12Q9H244 342 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 SNX7Q9UNH6 387 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 ANGPT4Q9Y264 503 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 BRWD3Q6RI45 1802 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 PIKFYVEQ9Y2I7 2098 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 ZSCAN5BA6NJL1 495 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 DSCR3O14972 297 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 PTTG1O95997 202 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 NNMTP40261 264 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 XKP51811 444 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 OR2G6Q5TZ20 316 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 DPY19L3Q6ZPD9 716 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 CHST14Q8NCH0 376 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 LILRB4Q8NHJ6 448 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 PRR14Q9BWN1 585 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 NDUFAF4Q9P032 175 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 HCN4Q9Y3Q4 1203 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 YY2O15391 372 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 KLK8O60259 260 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 ETHE1O95571 254 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 GASTP01350 101 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 ATP1B2P14415 290 aaPredicted RBP13.57□□□□□ -0.24
PCDH8-201ENST00000338862 MYL9P24844 172 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 AOAHP28039 575 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 CSTF2P33240 577 aaKnown RBP eCLIP13.57□□□□□ -0.24
PCDH8-201ENST00000338862 NRIP1P48552 1158 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 AP1S1P61966 158 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 RING1Q06587 406 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 PIN1Q13526 163 aaPredicted RBP13.57□□□□□ -0.24
PCDH8-201ENST00000338862 KIAA0040Q15053 153 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 PRR23CQ6ZRP0 262 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 PTOV1Q86YD1 416 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 NTMT1Q9BV86 223 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 RACGAP1Q9H0H5 632 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 KCNK12Q9HB15 430 aa13.57□□□□□ -0.24
PCDH8-201ENST00000338862 H2AFY2Q9P0M6 372 aaPredicted RBP13.57□□□□□ -0.24
PCDH8-201ENST00000338862 TRIM64A6NGJ6 449 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 SYN3O14994 580 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 HNRNPFP52597 415 aaKnown RBP13.56□□□□□ -0.24
PCDH8-201ENST00000338862 ARPC4P59998 168 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 BAK1Q16611 211 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 ANXA8L1Q5VT79 327 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 SMARCD3Q6STE5 483 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 ZNF740Q8NDX6 193 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 SUN5Q8TC36 379 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 LHX3Q9UBR4 397 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 RGS17Q9UGC6 210 aaPredicted RBP13.56□□□□□ -0.24
PCDH8-201ENST00000338862 OSGIN1Q9UJX0 560 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 ASF1AQ9Y294 204 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 ARID1AO14497 2285 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 CLDN24A6NM45 220 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 NCR1O76036 304 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 CYP17A1P05093 508 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 EIF2S1P05198 315 aaKnown RBP13.56□□□□□ -0.24
PCDH8-201ENST00000338862 PAX3P23760 479 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 ITGA1P56199 1179 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 MAP4K2Q12851 820 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 CRHR2Q13324 411 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 MTA1Q13330 715 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 SLC5A12Q1EHB4 618 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 CEP78Q5JTW2 689 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 LAPTM4BQ86VI4 370 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 ZNF614Q8N883 585 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 SYT14Q8NB59 555 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 POF1BQ8WVV4 589 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 FNDC11Q9BVV2 318 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 TSSK6Q9BXA6 273 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 SUV39H2Q9H5I1 410 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 NMNAT1Q9HAN9 279 aaPredicted RBP13.56□□□□□ -0.24
PCDH8-201ENST00000338862 CXXC1Q9P0U4 656 aaPredicted RBP13.56□□□□□ -0.24
PCDH8-201ENST00000338862 DNMT3BQ9UBC3 853 aaKnown RBP13.56□□□□□ -0.24
PCDH8-201ENST00000338862 PRAMEF33A0A0G2JMD5 474 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 PRAMEF10O60809 474 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 NR2F6P10588 404 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 PDHA2P29803 388 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 EPHB3P54753 998 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 SELENOWP63302 87 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 TRIM46Q7Z4K8 759 aa13.56□□□□□ -0.24
PCDH8-201ENST00000338862 RBM45Q8IUH3 476 aaKnown RBP13.56□□□□□ -0.24
PCDH8-201ENST00000338862 TRAV6A0A075B6T7 132 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 A0A1W2PRU2 124 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 PLD2O14939 933 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 FRS3O43559 492 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 GPX5O75715 221 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 SLC2A2P11168 524 aaPredicted RBP13.55□□□□□ -0.24
PCDH8-201ENST00000338862 CR2P20023 1033 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 CD72P21854 359 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 SDC2P34741 201 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 TGFBR2P37173 567 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 BTBD16Q32M84 506 aa13.55□□□□□ -0.24
PCDH8-201ENST00000338862 GPAT3Q53EU6 434 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms