RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 GJA4P35212 333 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 PIGFQ07326 219 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 ZNF155Q12901 538 aaPredicted RBP6.04□□□□□ -1.44
PRKDC-202ENST00000338368 C1orf61Q13536 156 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 ZNF773Q6PK81 442 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 LCTLQ6UWM7 567 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 ENPP6Q6UWR7 440 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 VTCN1Q7Z7D3 282 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 RC3H2Q9HBD1 1191 aaKnown RBP6.04□□□□□ -1.44
PRKDC-202ENST00000338368 HCN3Q9P1Z3 774 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 IFNGP01579 166 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 TFAP2AP05549 437 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 H1F0P07305 194 aaKnown RBP6.04□□□□□ -1.44
PRKDC-202ENST00000338368 CD36P16671 472 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 HOXA9P31269 272 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 TIGD6Q17RP2 521 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 KLHL22Q53GT1 634 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 ZNF765Q7L2R6 523 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 MAGIXQ9H6Y5 334 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 WDR45Q9Y484 360 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 MTCL1Q9Y4B5 1905 aaKnown RBP6.04□□□□□ -1.44
PRKDC-202ENST00000338368 OR52A4PA6NMU1 304 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 STX11O75558 287 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 MATN1P21941 496 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 ALDH4A1P30038 563 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 CBLBQ13191 982 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 ZNF544Q6NX49 715 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 RANBP3LQ86VV4 465 aaPredicted RBP6.04□□□□□ -1.44
PRKDC-202ENST00000338368 KLHL6Q8WZ60 621 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 LYSMD1Q96S90 227 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 TNFRSF12AQ9NP84 129 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 NKX3-2P78367 333 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 TAP2Q03519 686 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 UGT3A2Q3SY77 523 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 TANGO2Q6ICL3 276 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 UBTD2Q8WUN7 234 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 OR2M4Q96R27 311 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 UCK2Q9BZX2 261 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 C7orf72A4D263 438 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 TAPBPO15533 448 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 EN2P19622 333 aaPredicted RBP6.03□□□□□ -1.44
PRKDC-202ENST00000338368 GPR68Q15743 365 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 REEP3Q6NUK4 255 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 LILRA3Q8N6C8 439 aaPredicted RBP6.03□□□□□ -1.44
PRKDC-202ENST00000338368 C16orf78Q8WTQ4 265 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 DOHHQ9BU89 302 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 LYARQ9NX58 379 aaKnown RBP6.03□□□□□ -1.44
PRKDC-202ENST00000338368 PHF11Q9UIL8 331 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 ACSL6Q9UKU0 697 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 C17orf113A0A1B0GUU1 675 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 CLDN25C9JDP6 229 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 MID1O15344 667 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 RSBN1Q5VWQ0 802 aaPredicted RBP6.03□□□□□ -1.44
PRKDC-202ENST00000338368 ABHD13Q7L211 337 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 GALNT10Q86SR1 603 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 KCT2Q8NC54 265 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 POLR2J2Q9GZM3 115 aaKnown RBP6.03□□□□□ -1.44
PRKDC-202ENST00000338368 RPL36Q9Y3U8 105 aaKnown RBP6.03□□□□□ -1.44
PRKDC-202ENST00000338368 TTLL8A6PVC2 850 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 HIST1H2ABP04908 130 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 SLC13A2Q13183 592 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 HIST3H2AQ7L7L0 130 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 PLPP6Q8IY26 295 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 CADM2Q8N3J6 435 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 OR4K14Q8NGD5 310 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 FRS2Q8WU20 508 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 JPH3Q8WXH2 748 aaPredicted RBP6.03□□□□□ -1.44
PRKDC-202ENST00000338368 HIST1H2ACQ93077 130 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 ZNF597Q96LX8 424 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 FAM83CQ9BQN1 747 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 APOOQ9BUR5 198 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 GSDMCQ9BYG8 508 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 KIAA0355O15063 1070 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 OR12D1P0DN82 309 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 CAPZA2P47755 286 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 XKP51811 444 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 MC1RQ01726 317 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 SELPLGQ14242 412 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 FAM78AQ5JUQ0 283 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 VRK3Q8IV63 474 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.03□□□□□ -1.44
PRKDC-202ENST00000338368 HCAR2Q8TDS4 363 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 TMEM19Q96HH6 336 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 MVKQ03426 396 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 DUS1LQ6P1R4 473 aaKnown RBP6.03□□□□□ -1.44
PRKDC-202ENST00000338368 MZT2AQ6P582 158 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 RTL4Q6ZR62 310 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 RNF44Q7L0R7 432 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 SLC2A4RGQ9NR83 387 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 BTBD3Q9Y2F9 522 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 MRPS7Q9Y2R9 242 aaKnown RBP6.03□□□□□ -1.44
PRKDC-202ENST00000338368 CASKO14936 926 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 KCNJ13O60928 360 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 MITFO75030 526 aaPredicted RBP6.03□□□□□ -1.44
PRKDC-202ENST00000338368 CHRM5P08912 532 aaPredicted RBP6.03□□□□□ -1.44
PRKDC-202ENST00000338368 MAGP20916 626 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 HRH2P25021 359 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 CD47Q08722 323 aa6.03□□□□□ -1.44
PRKDC-202ENST00000338368 TMEM102Q8N9M5 508 aaPredicted RBP6.03□□□□□ -1.44
PRKDC-202ENST00000338368 ZNF740Q8NDX6 193 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms