RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 NEDD4LQ96PU5 975 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 OR14A2Q96R54 314 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 MGLLQ99685 303 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 TCEAL7Q9BRU2 100 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 HSD3B7Q9H2F3 369 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 SLC32A1Q9H598 525 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 FZD3Q9NPG1 666 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 ZNF701Q9NV72 531 aaPredicted RBP9.48□□□□□ -0.89
COL4A6-201ENST00000334504 SMOXQ9NWM0 555 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 GRHPRQ9UBQ7 328 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 PTPRUQ92729 1446 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 CIB4A0PJX0 185 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 LOC730098B7Z3J9 87 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 H0YGN5 161 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 BLOC1S5-TXNDC5H3BN57 136 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 UBFD1O14562 309 aaKnown RBP9.47□□□□□ -0.89
COL4A6-201ENST00000334504 ARPC5O15511 151 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 SLC6A6P31641 620 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 FRG2Q64ET8 278 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 OTOP2Q7RTS6 562 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 RNF130Q86XS8 419 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 GOLM1Q8NBJ4 401 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 CHDHQ8NE62 594 aaPredicted RBP9.47□□□□□ -0.89
COL4A6-201ENST00000334504 NSMAFQ92636 917 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 TMIGD2Q96BF3 282 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 ELMOD3Q96FG2 381 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 FRG2BQ96QU4 278 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 CACNG6Q9BXT2 260 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 MEAF6Q9HAF1 191 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 FANCFQ9NPI8 374 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 NFS1Q9Y697 457 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 SPATA31C2B4DYI2 1134 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 CFIP05156 583 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 UNGP13051 313 aaPredicted RBP9.47□□□□□ -0.89
COL4A6-201ENST00000334504 SEMG2Q02383 582 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 GAD2Q05329 585 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 NANOGP8Q6NSW7 305 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 ARHGAP12Q8IWW6 846 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 TMEM185AQ8NFB2 350 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 ABHD11Q8NFV4 315 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 NLGN2Q8NFZ4 835 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 SLC35B2Q8TB61 432 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 SNAPC3Q92966 411 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 UNKLQ9H9P5 680 aaKnown RBP9.47□□□□□ -0.89
COL4A6-201ENST00000334504 NANOGQ9H9S0 305 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 ACTR10Q9NZ32 417 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 UTS2RQ9UKP6 389 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 CYP8B1Q9UNU6 501 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 SETBP1Q9Y6X0 1596 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 CDC7O00311 574 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 CCL16O15467 120 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 PI15O43692 258 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 TFP02787 698 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 RAB4AP20338 218 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 CD52P31358 61 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 AQP2P41181 271 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 RAB5CP51148 216 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 CCR8P51685 355 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 MFSD13AQ14CX5 517 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 ZNF630Q2M218 657 aaPredicted RBP9.47□□□□□ -0.89
COL4A6-201ENST00000334504 TBC1D25Q3MII6 688 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 GID4Q8IVV7 300 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 PRSS58Q8IYP2 241 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 CLEC4CQ8WTT0 213 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 RGMAQ96B86 450 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 NELFAQ9H3P2 528 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 FBRSL1Q9HCM7 1045 aaKnown RBP9.47□□□□□ -0.89
COL4A6-201ENST00000334504 NLGN3Q9NZ94 848 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 SLC2A6Q9UGQ3 507 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 B3GALNT1O75752 331 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 ADH1CP00326 375 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 ALDOBP05062 364 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 OR8U9P0C7N5 309 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 SYN1P17600 705 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 FECHP22830 423 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 ATP5A1P25705 553 aaKnown RBP9.47□□□□□ -0.89
COL4A6-201ENST00000334504 BTN1A1Q13410 526 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 LRRC73Q5JTD7 316 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 BEST4Q8NFU0 473 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 OR2M4Q96R27 311 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 MAGEH1Q9H213 219 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 APOBEC3GQ9HC16 384 aaKnown RBP9.47□□□□□ -0.89
COL4A6-201ENST00000334504 PNO1Q9NRX1 252 aaKnown RBP9.47□□□□□ -0.89
COL4A6-201ENST00000334504 H3BMQ9 156 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 SULT1C2O00338 296 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 SLC1A7O00341 560 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 GMDSO60547 372 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 AGR2O95994 175 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 AHSGP02765 367 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 RETP07949 1114 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 ITGB5P18084 799 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 CRYBB1P53674 252 aaPredicted RBP9.47□□□□□ -0.89
COL4A6-201ENST00000334504 FAM122CQ6P4D5 195 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 WDR53Q7Z5U6 358 aaPredicted RBP9.47□□□□□ -0.89
COL4A6-201ENST00000334504 TMCO2Q7Z6W1 182 aaPredicted RBP9.47□□□□□ -0.89
COL4A6-201ENST00000334504 ZNF527Q8NB42 609 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 LILRB4Q8NHJ6 448 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 CNOT9Q92600 299 aaKnown RBP9.47□□□□□ -0.89
COL4A6-201ENST00000334504 FRZBQ92765 325 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 COG8Q96MW5 612 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms