RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 RCBTB2O95199 551 aa14.42□□□□□ -0.1
C9orf47-201ENST00000334490 CD38P28907 300 aa14.42□□□□□ -0.1
C9orf47-201ENST00000334490 NUDT1P36639 197 aa14.42□□□□□ -0.1
C9orf47-201ENST00000334490 ZNF41P51814 821 aaPredicted RBP14.42□□□□□ -0.1
C9orf47-201ENST00000334490 TCTE1Q5JU00 501 aa14.42□□□□□ -0.1
C9orf47-201ENST00000334490 OR52E8Q6IFG1 317 aa14.42□□□□□ -0.1
C9orf47-201ENST00000334490 GATSQ8NAP1 163 aa14.42□□□□□ -0.1
C9orf47-201ENST00000334490 NUP43Q8NFH3 380 aa14.42□□□□□ -0.1
C9orf47-201ENST00000334490 TSPEARQ8WU66 669 aa14.42□□□□□ -0.1
C9orf47-201ENST00000334490 TMBIM1Q969X1 311 aa14.42□□□□□ -0.1
C9orf47-201ENST00000334490 BIRC7Q96CA5 298 aa14.42□□□□□ -0.1
C9orf47-201ENST00000334490 PEX11GQ96HA9 241 aa14.42□□□□□ -0.1
C9orf47-201ENST00000334490 GFM1Q96RP9 751 aaKnown RBP14.42□□□□□ -0.1
C9orf47-201ENST00000334490 PREBQ9HCU5 417 aa14.42□□□□□ -0.1
C9orf47-201ENST00000334490 GPRC5BQ9NZH0 403 aa14.42□□□□□ -0.1
C9orf47-201ENST00000334490 ANKMY1Q9P2S6 941 aa14.42□□□□□ -0.1
C9orf47-201ENST00000334490 PCTPQ9UKL6 214 aa14.42□□□□□ -0.1
C9orf47-201ENST00000334490 SPATA2Q9UM82 520 aa14.42□□□□□ -0.1
C9orf47-201ENST00000334490 PADI2Q9Y2J8 665 aa14.42□□□□□ -0.1
C9orf47-201ENST00000334490 OR12D1P0DN82 309 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 GSTT1P30711 240 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 HOXA9P31269 272 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 BMP8BP34820 402 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 ZNF140P52738 457 aaPredicted RBP14.41□□□□□ -0.1
C9orf47-201ENST00000334490 TMEM44Q2T9K0 475 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 NANOGP8Q6NSW7 305 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 BMP8AQ7Z5Y6 402 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 ZFYVE21Q9BQ24 234 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 COPS4Q9BT78 406 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 NANOGQ9H9S0 305 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 ARNT2Q9HBZ2 717 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 PAK6Q9NQU5 681 aaPredicted RBP14.41□□□□□ -0.1
C9orf47-201ENST00000334490 HS3ST2Q9Y278 367 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 PHIPQ8WWQ0 1821 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 MAST2Q6P0Q8 1798 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 E7EQ34 232 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 GJB3O75712 270 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 TLR1Q15399 786 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 SLC5A9Q2M3M2 681 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 IQCCQ4KMZ1 466 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 PDSS1Q5T2R2 415 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 IER5LQ5T953 404 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 OR4C11Q6IEV9 310 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 LRRC25Q8N386 305 aaPredicted RBP14.41□□□□□ -0.1
C9orf47-201ENST00000334490 PSMA8Q8TAA3 256 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 MCHR1Q99705 422 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 TRIM2Q9C040 744 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 CENPMQ9NSP4 180 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 DNAJC15Q9Y5T4 150 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 HHLA1C9JL84 531 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 AKAP8O43823 692 aaKnown RBP14.41□□□□□ -0.1
C9orf47-201ENST00000334490 CD2P06729 351 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 RPS6KA3P51812 740 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 RAB14P61106 215 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 SH3BP2P78314 561 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 RNF111Q6ZNA4 994 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 CHCHD4Q8N4Q1 142 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 MCFD2Q8NI22 146 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 TBX5Q99593 518 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 CHCHD6Q9BRQ6 235 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 CWH43Q9H720 699 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 SEC61A2Q9H9S3 476 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 LRP5O75197 1615 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 EMC8O43402 210 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 HCRTR2O43614 444 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 ACADVLP49748 655 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 ADAM17P78536 824 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 PUM1Q14671 1186 aaKnown RBP eCLIP14.41□□□□□ -0.1
C9orf47-201ENST00000334490 KLHL22Q53GT1 634 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 TMEM31Q5JXX7 168 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 GALNT10Q86SR1 603 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 PELOQ9BRX2 385 aaKnown RBP14.41□□□□□ -0.1
C9orf47-201ENST00000334490 DKKL1Q9UK85 242 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 SIT1Q9Y3P8 196 aa14.41□□□□□ -0.1
C9orf47-201ENST00000334490 DFNA5O60443 496 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 MYBPC3Q14896 1274 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 SPATA9Q9BWV2 254 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 COMMD4Q9H0A8 199 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 TBC1D17Q9HA65 648 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 AIG1Q9NVV5 245 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 RPL36Q9Y3U8 105 aaKnown RBP14.4□□□□□ -0.1
C9orf47-201ENST00000334490 ENTPD2Q9Y5L3 495 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 BLOC1S5-TXNDC5H3BN57 136 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 TSC22D2O75157 780 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 DRD2P14416 443 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 PER3P56645 1201 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 SHC2P98077 582 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 NSDHLQ15738 373 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 PROKR2Q8NFJ6 384 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 EZH1Q92800 747 aaPredicted RBP14.4□□□□□ -0.1
C9orf47-201ENST00000334490 GORASP1Q9BQQ3 440 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 CA5BQ9Y2D0 317 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 PCDHGB7Q9Y5F8 929 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 LDOC1O95751 146 aaPredicted RBP14.4□□□□□ -0.1
C9orf47-201ENST00000334490 HTR6P50406 440 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 ERVPABLB-1P60509 514 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 PDZD3Q86UT5 571 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 LINC00471Q8N535 108 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 OR6N1Q8NGY5 312 aa14.4□□□□□ -0.1
C9orf47-201ENST00000334490 NXPE3Q969Y0 559 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms