RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 NR2F6P10588 404 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 ACADVLP49748 655 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 HNMTP50135 292 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 HLCSP50747 726 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 AFF3P51826 1226 aaKnown RBP11.33□□□□□ -0.6
HDAC6-201ENST00000334136 METAP1P53582 386 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 AGTRAPQ6RW13 159 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 MACC1Q6ZN28 852 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 MAVSQ7Z434 540 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 SUN5Q8TC36 379 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 NCSTNQ92542 709 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 LMLNQ96KR4 655 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 LYSMD1Q96S90 227 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 ANKRD60Q9BZ19 345 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 PEX16Q9Y5Y5 336 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 SMIM30A4D0T7 59 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 KHNYNO15037 678 aaKnown RBP11.33□□□□□ -0.6
HDAC6-201ENST00000334136 SGTAO43765 313 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 FZD6O60353 706 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 TSPAN9O75954 239 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 CD160O95971 181 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 RPLP0P05388 317 aaKnown RBP11.33□□□□□ -0.6
HDAC6-201ENST00000334136 CAPN3P20807 821 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 RPS3P23396 243 aaKnown RBP eCLIP11.33□□□□□ -0.6
HDAC6-201ENST00000334136 VARSP26640 1264 aaKnown RBP11.33□□□□□ -0.6
HDAC6-201ENST00000334136 KIR2DL1P43626 348 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-201ENST00000334136 TMBIM6P55061 237 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 RACK1P63244 317 aaKnown RBP11.33□□□□□ -0.6
HDAC6-201ENST00000334136 ZNF438Q7Z4V0 828 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 Q8N9G6 341 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-201ENST00000334136 FAM174AQ8TBP5 190 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 IL4I1Q96RQ9 567 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 NEU3Q9UQ49 428 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 MAGED1Q9Y5V3 778 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-201ENST00000334136 FRMPD3Q5JV73 1810 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 PLOD2O00469 737 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 DFNA5O60443 496 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 RASAL1O95294 804 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 COL9A1P20849 921 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 OPRL1P41146 370 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 RXRGP48443 463 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 DUSP3P51452 185 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-201ENST00000334136 DCDC1P59894 354 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 CD83Q01151 205 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 CPTPQ5TA50 214 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 NEK10Q6ZWH5 1172 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 ZZZ3Q8IYH5 903 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 OXR1Q8N573 874 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 ABHD11Q8NFV4 315 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 PJA1Q8NG27 643 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 ATOH1Q92858 354 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-201ENST00000334136 ART5Q96L15 291 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 SLC6A18Q96N87 628 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 MTERF1Q99551 399 aaKnown RBP11.33□□□□□ -0.6
HDAC6-201ENST00000334136 CHRDQ9H2X0 955 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 MRPS30Q9NP92 439 aaKnown RBP11.33□□□□□ -0.6
HDAC6-201ENST00000334136 C1orf109Q9NX04 203 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 PLAGL1Q9UM63 463 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 TRPM6Q9BX84 2022 aa11.33□□□□□ -0.6
HDAC6-201ENST00000334136 GPR89AB7ZAQ6 455 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 AREL1O15033 823 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 ENO2P09104 434 aaPredicted RBP11.32□□□□□ -0.6
HDAC6-201ENST00000334136 GPR89BP0CG08 455 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 CHRNB1P11230 501 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 MAGEA3P43357 314 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 SH3BP2P78314 561 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 ZXDAP98168 799 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 KCNC3Q14003 757 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 ZNF404Q494X3 552 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 PIP5KL1Q5T9C9 394 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 PRAMEF13Q5VWM6 474 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 C11orf88Q6PI97 169 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 TRUB1Q8WWH5 349 aaKnown RBP11.32□□□□□ -0.6
HDAC6-201ENST00000334136 TMEM203Q969S6 136 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 ECHDC3Q96DC8 303 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 GABRG3Q99928 467 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 LHPPQ9H008 270 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 ING3Q9NXR8 418 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 PTGFRNQ9P2B2 879 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 SLC22A14Q9Y267 594 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 MAP4K5Q9Y4K4 846 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 PRSS51A0A1B0GVH4 220 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 PRSS38A1L453 326 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 PPP6CO00743 305 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 OR1F1O43749 312 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 AK4P27144 223 aaPredicted RBP11.32□□□□□ -0.6
HDAC6-201ENST00000334136 ARCN1P48444 511 aaKnown RBP11.32□□□□□ -0.6
HDAC6-201ENST00000334136 NCS1P62166 190 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 SCN1BQ07699 218 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 PTCHD3Q3KNS1 767 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 C6orf136Q5SQH8 315 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 AGBL4Q5VU57 503 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 ANKFN1Q8N957 763 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 OR8H1Q8NGG4 311 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 TADA1Q96BN2 335 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 ZNF597Q96LX8 424 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 XKR8Q9H6D3 395 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 HRASLS2Q9NWW9 162 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 H7C0S8 307 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 GUCY1B2O75343 617 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms