RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 PPP1R3BQ86XI6 285 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 TTLQ8NG68 377 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 GAL3ST3Q96A11 431 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 THAP11Q96EK4 314 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 FAR2Q96K12 515 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 RILPQ96NA2 401 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 SERPINI1Q99574 410 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 HEY2Q9UBP5 337 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 DMXL2Q8TDJ6 3036 aa15.63■□□□□ 0.09
SHOX-201ENST00000334060 NCOR2Q9Y618 2525 aa15.63■□□□□ 0.09
SHOX-201ENST00000334060 AHCTF1Q8WYP5 2266 aa15.63■□□□□ 0.09
SHOX-201ENST00000334060 TRPC5OSA6NMA1 111 aa15.63■□□□□ 0.09
SHOX-201ENST00000334060 AKAP10O43572 662 aa15.63■□□□□ 0.09
SHOX-201ENST00000334060 PCDH7O60245 1069 aa15.63■□□□□ 0.09
SHOX-201ENST00000334060 MSL3P1P0C860 447 aa15.63■□□□□ 0.09
SHOX-201ENST00000334060 FGF5P12034 268 aa15.63■□□□□ 0.09
SHOX-201ENST00000334060 EFNA1P20827 205 aaPredicted RBP15.63■□□□□ 0.09
SHOX-201ENST00000334060 HIST1H1TP22492 207 aaPredicted RBP15.63■□□□□ 0.09
SHOX-201ENST00000334060 ACSM2AQ08AH3 577 aa15.63■□□□□ 0.09
SHOX-201ENST00000334060 ZNF750Q32MQ0 723 aa15.63■□□□□ 0.09
SHOX-201ENST00000334060 AP1ARQ63HQ0 302 aa15.63■□□□□ 0.09
SHOX-201ENST00000334060 ACSM2BQ68CK6 577 aa15.63■□□□□ 0.09
SHOX-201ENST00000334060 RNF165Q6ZSG1 346 aa15.63■□□□□ 0.09
SHOX-201ENST00000334060 CHSY3Q70JA7 882 aa15.63■□□□□ 0.09
SHOX-201ENST00000334060 COX15Q7KZN9 410 aa15.63■□□□□ 0.09
SHOX-201ENST00000334060 TMPRSS7Q7RTY8 843 aa15.63■□□□□ 0.09
SHOX-201ENST00000334060 TBC1D19Q8N5T2 526 aa15.63■□□□□ 0.09
SHOX-201ENST00000334060 FAM47BQ8NA70 645 aa15.63■□□□□ 0.09
SHOX-201ENST00000334060 CCDC197Q8NCU1 140 aa15.63■□□□□ 0.09
SHOX-201ENST00000334060 MMABQ96EY8 250 aaPredicted RBP15.63■□□□□ 0.09
SHOX-201ENST00000334060 NOP53Q9NZM5 478 aaKnown RBP15.63■□□□□ 0.09
SHOX-201ENST00000334060 COPG1Q9Y678 874 aaKnown RBP15.63■□□□□ 0.09
SHOX-201ENST00000334060 CCDC187A0A096LP49 1063 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 CCT8L1PA6NM43 557 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 SLCO1B7G3V0H7 640 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 SNUPNO95149 360 aaKnown RBP15.62■□□□□ 0.09
SHOX-201ENST00000334060 JMJD7P0C870 316 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 PRPH2P23942 346 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 TIA1P31483 386 aaKnown RBP eCLIP15.62■□□□□ 0.09
SHOX-201ENST00000334060 UFM1P61960 85 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 SLAMF1Q13291 335 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 CAMK2BQ13554 666 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 ZNF385CQ66K41 422 aaPredicted RBP15.62■□□□□ 0.09
SHOX-201ENST00000334060 TRIM40Q6P9F5 258 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 PAOXQ6QHF9 649 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 PRSS58Q8IYP2 241 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 GPR135Q8IZ08 494 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 ACTRT2Q8TDY3 377 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 DOK4Q8TEW6 326 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 RGMAQ96B86 450 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 MAGEB10Q96LZ2 347 aaPredicted RBP15.62■□□□□ 0.09
SHOX-201ENST00000334060 CTSFQ9UBX1 484 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 SERTAD3Q9UJW9 196 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 PPT2Q9UMR5 302 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 CCDC88CQ9P219 2028 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 A0A1W2PR48 441 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 ANKRD28O15084 1053 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 TNFSF15O95150 251 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 IL3P08700 152 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 ANXA4P09525 319 aaPredicted RBP15.62■□□□□ 0.09
SHOX-201ENST00000334060 HSD3B1P14060 373 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 LBPP18428 481 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 NCF2P19878 526 aaPredicted RBP15.62■□□□□ 0.09
SHOX-201ENST00000334060 HSD3B2P26439 372 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 ZFP36L2P47974 494 aaKnown RBP15.62■□□□□ 0.09
SHOX-201ENST00000334060 STXBP1P61764 594 aaKnown RBP15.62■□□□□ 0.09
SHOX-201ENST00000334060 GABREP78334 506 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 ELF3P78545 371 aaPredicted RBP15.62■□□□□ 0.09
SHOX-201ENST00000334060 SHC2P98077 582 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 GRM7Q14831 915 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 CLNKQ7Z7G1 428 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 TMPRSS12Q86WS5 348 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 GALNT6Q8NCL4 622 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 FCRL1Q96LA6 429 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 GBP5Q96PP8 586 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 ULBP3Q9BZM4 244 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 STRADBQ9C0K7 418 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 NSRP1Q9H0G5 558 aaKnown RBP15.62■□□□□ 0.09
SHOX-201ENST00000334060 ZNF385DQ9H6B1 395 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 FBXO8Q9NRD0 319 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 KCMF1Q9P0J7 381 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 WASF3Q9UPY6 502 aa15.62■□□□□ 0.09
SHOX-201ENST00000334060 GNG14A0A1W2PPG7 69 aa15.61■□□□□ 0.09
SHOX-201ENST00000334060 PAX7P23759 505 aa15.61■□□□□ 0.09
SHOX-201ENST00000334060 RORAP35398 523 aa15.61■□□□□ 0.09
SHOX-201ENST00000334060 TAS2R50P59544 299 aa15.61■□□□□ 0.09
SHOX-201ENST00000334060 ERVK-8P63133 956 aa15.61■□□□□ 0.09
SHOX-201ENST00000334060 PHEXP78562 749 aa15.61■□□□□ 0.09
SHOX-201ENST00000334060 ID2Q02363 134 aa15.61■□□□□ 0.09
SHOX-201ENST00000334060 ZNF385BQ569K4 471 aa15.61■□□□□ 0.09
SHOX-201ENST00000334060 VWA2Q5GFL6 755 aa15.61■□□□□ 0.09
SHOX-201ENST00000334060 TCTE1Q5JU00 501 aa15.61■□□□□ 0.09
SHOX-201ENST00000334060 CCNYL2Q5T2Q4 361 aa15.61■□□□□ 0.09
SHOX-201ENST00000334060 MTDHQ86UE4 582 aaKnown RBP15.61■□□□□ 0.09
SHOX-201ENST00000334060 CA13Q8N1Q1 262 aa15.61■□□□□ 0.09
SHOX-201ENST00000334060 CEP70Q8NHQ1 597 aa15.61■□□□□ 0.09
SHOX-201ENST00000334060 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.61■□□□□ 0.09
SHOX-201ENST00000334060 C16orf78Q8WTQ4 265 aa15.61■□□□□ 0.09
SHOX-201ENST00000334060 TM4SF18Q96CE8 201 aa15.61■□□□□ 0.09
SHOX-201ENST00000334060 CLIP3Q96DZ5 547 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms