RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 RERGQ96A58 199 aaPredicted RBP9.05□□□□□ -0.96
C11orf54-201ENST00000331239 SLCO4A1Q96BD0 722 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 OR2A5Q96R48 311 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 PRPF18Q99633 342 aaKnown RBP9.05□□□□□ -0.96
C11orf54-201ENST00000331239 TBCDQ9BTW9 1192 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 SEMA6AQ9H2E6 1030 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 COQ10BQ9H8M1 238 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 DMRT3Q9NQL9 472 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 C1orf109Q9NX04 203 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 ABCD2Q9UBJ2 740 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 GIMAP2Q9UG22 337 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 NDUFAF1Q9Y375 327 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 SNX13Q9Y5W8 968 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 SLC22A7Q9Y694 548 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 AK5Q9Y6K8 562 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 BLACEA4D250 179 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 SYNDIG1LA6NDD5 238 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 C4orf47A7E2U8 309 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 PRMT3O60678 531 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 RFPL3O75679 317 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 MYO1DO94832 1006 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 SCELO95171 688 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 RPLP0P05388 317 aaKnown RBP9.05□□□□□ -0.96
C11orf54-201ENST00000331239 SLC35G6P0C7Q6 338 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 PRPS2P11908 318 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 TYRP1P17643 537 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 CAPN3P20807 821 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 ATP6V1B2P21281 511 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 VARSP26640 1264 aaKnown RBP9.05□□□□□ -0.96
C11orf54-201ENST00000331239 NME5P56597 212 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 C21orf58P58505 322 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 NRF1Q16656 503 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 ATP6AP1LQ52LC2 224 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 PERM1Q5SV97 790 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 CACHD1Q5VU97 1274 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 AP1ARQ63HQ0 302 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 ASPGQ86U10 573 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 NATD1Q8N6N6 113 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 HUS1BQ8NHY5 278 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 TSPEARQ8WU66 669 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 TUBGCP3Q96CW5 907 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 ZNF764Q96H86 408 aaPredicted RBP9.05□□□□□ -0.96
C11orf54-201ENST00000331239 KCNA7Q96RP8 456 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 HOPXQ9BPY8 73 aaPredicted RBP9.05□□□□□ -0.96
C11orf54-201ENST00000331239 GPATCH1Q9BRR8 931 aaKnown RBP9.05□□□□□ -0.96
C11orf54-201ENST00000331239 OSBPL11Q9BXB4 747 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 MS4A8Q9BY19 250 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 TRIM15Q9C019 465 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 GRIP2Q9C0E4 1043 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 SMOC1Q9H4F8 434 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 FANCEQ9HB96 536 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 CUEDC1Q9NWM3 386 aaPredicted RBP9.05□□□□□ -0.96
C11orf54-201ENST00000331239 AKAP7Q9P0M2 348 aaPredicted RBP9.05□□□□□ -0.96
C11orf54-201ENST00000331239 RUVBL1Q9Y265 456 aaKnown RBP9.05□□□□□ -0.96
C11orf54-201ENST00000331239 BTBD3Q9Y2F9 522 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 DYTNA2CJ06 578 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 D6RAR5 112 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 FXYD1O00168 92 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 NME4O00746 187 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 OR1F1O43749 312 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 GUCY1B2O75343 617 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 PDYNP01213 254 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 HBQ1P09105 142 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 ATP6V1B1P15313 513 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 PSMB5P28074 263 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 MLLT3P42568 568 aaPredicted RBP9.04□□□□□ -0.96
C11orf54-201ENST00000331239 GABRA4P48169 554 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 ERVK-8P63133 956 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 CCL7P80098 99 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 EIF3IQ13347 325 aaKnown RBP9.04□□□□□ -0.96
C11orf54-201ENST00000331239 LSAMPQ13449 338 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 TCEA2Q15560 299 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 NDUFA9Q16795 377 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 IMPG1Q17R60 797 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 NADK2Q4G0N4 442 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 KHDRBS2Q5VWX1 349 aaKnown RBP9.04□□□□□ -0.96
C11orf54-201ENST00000331239 CDCP2Q5VXM1 449 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 RBM44Q6ZP01 1051 aaKnown RBP9.04□□□□□ -0.96
C11orf54-201ENST00000331239 MED25Q71SY5 747 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 SLITRK4Q8IW52 837 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 SFTPA2Q8IWL1 248 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 METTL4Q8N3J2 472 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 CHTF18Q8WVB6 975 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 GAL3ST3Q96A11 431 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 RGMAQ96B86 450 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 DGCR14Q96DF8 476 aaKnown RBP9.04□□□□□ -0.96
C11orf54-201ENST00000331239 MVB12AQ96EY5 273 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 ACAT2Q9BWD1 397 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 NPLQ9BXD5 320 aaPredicted RBP9.04□□□□□ -0.96
C11orf54-201ENST00000331239 SLC6A16Q9GZN6 736 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 TUBB1Q9H4B7 451 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 SDR39U1Q9NRG7 319 aaPredicted RBP9.04□□□□□ -0.96
C11orf54-201ENST00000331239 RYDENQ9NUL5 291 aaKnown RBP9.04□□□□□ -0.96
C11orf54-201ENST00000331239 PTTG2Q9NZH5 202 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 CIDEBQ9UHD4 219 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 SH2B3Q9UQQ2 575 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 MYOCOSA0A1B0GUC4 107 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 A0A1W2PQM1 296 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 C7orf72A4D263 438 aa9.04□□□□□ -0.96
C11orf54-201ENST00000331239 KRT87PA6NCN2 255 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms