RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 MDC1Q14676 2089 aaKnown RBP17.86■□□□□ 0.45
EXOSC3-201ENST00000327304 A0A0J9YVX5 310 aa17.86■□□□□ 0.45
EXOSC3-201ENST00000327304 AQP12BA6NM10 295 aa17.86■□□□□ 0.45
EXOSC3-201ENST00000327304 CASQ2O14958 399 aaPredicted RBP17.86■□□□□ 0.45
EXOSC3-201ENST00000327304 FOXD2O60548 495 aaPredicted RBP17.86■□□□□ 0.45
EXOSC3-201ENST00000327304 ERN1O75460 977 aaKnown RBP17.86■□□□□ 0.45
EXOSC3-201ENST00000327304 CPNE6O95741 557 aa17.86■□□□□ 0.45
EXOSC3-201ENST00000327304 TBX6O95947 436 aaPredicted RBP17.86■□□□□ 0.45
EXOSC3-201ENST00000327304 GSK3BP49841 420 aa17.86■□□□□ 0.45
EXOSC3-201ENST00000327304 RPS15AP62244 130 aaKnown RBP17.86■□□□□ 0.45
EXOSC3-201ENST00000327304 LIPEQ05469 1076 aa17.86■□□□□ 0.45
EXOSC3-201ENST00000327304 SRSF11Q05519 484 aaKnown RBP17.86■□□□□ 0.45
EXOSC3-201ENST00000327304 LCN8Q6JVE9 175 aa17.86■□□□□ 0.45
EXOSC3-201ENST00000327304 ZNF574Q6ZN55 896 aaPredicted RBP17.86■□□□□ 0.45
EXOSC3-201ENST00000327304 RNF44Q7L0R7 432 aa17.86■□□□□ 0.45
EXOSC3-201ENST00000327304 AQP12AQ8IXF9 295 aa17.86■□□□□ 0.45
EXOSC3-201ENST00000327304 TBC1D19Q8N5T2 526 aa17.86■□□□□ 0.45
EXOSC3-201ENST00000327304 C1orf52Q8N6N3 182 aaKnown RBP17.86■□□□□ 0.45
EXOSC3-201ENST00000327304 SH3GL1Q99961 368 aa17.86■□□□□ 0.45
EXOSC3-201ENST00000327304 EBPLQ9BY08 206 aa17.86■□□□□ 0.45
EXOSC3-201ENST00000327304 PRSS51A0A1B0GVH4 220 aa17.85■□□□□ 0.45
EXOSC3-201ENST00000327304 ANKDD1BA6NHY2 528 aa17.85■□□□□ 0.45
EXOSC3-201ENST00000327304 HCRTR1O43613 425 aa17.85■□□□□ 0.45
EXOSC3-201ENST00000327304 HTR1EP28566 365 aa17.85■□□□□ 0.45
EXOSC3-201ENST00000327304 SERPINB1P30740 379 aa17.85■□□□□ 0.45
EXOSC3-201ENST00000327304 AHRP35869 848 aa17.85■□□□□ 0.45
EXOSC3-201ENST00000327304 RAE1P78406 368 aaKnown RBP17.85■□□□□ 0.45
EXOSC3-201ENST00000327304 FXNQ16595 210 aa17.85■□□□□ 0.45
EXOSC3-201ENST00000327304 MUM1Q2TAK8 710 aa17.85■□□□□ 0.45
EXOSC3-201ENST00000327304 CMPK2Q5EBM0 449 aa17.85■□□□□ 0.45
EXOSC3-201ENST00000327304 LRIF1Q5T3J3 769 aa17.85■□□□□ 0.45
EXOSC3-201ENST00000327304 TMEM71Q6P5X7 295 aa17.85■□□□□ 0.45
EXOSC3-201ENST00000327304 VN1R4Q7Z5H5 301 aa17.85■□□□□ 0.45
EXOSC3-201ENST00000327304 GPR180Q86V85 440 aa17.85■□□□□ 0.45
EXOSC3-201ENST00000327304 PQLC1Q8N2U9 271 aa17.85■□□□□ 0.45
EXOSC3-201ENST00000327304 CREB3L4Q8TEY5 395 aa17.85■□□□□ 0.45
EXOSC3-201ENST00000327304 ITCHQ96J02 903 aa17.85■□□□□ 0.45
EXOSC3-201ENST00000327304 EGLN2Q96KS0 407 aa17.85■□□□□ 0.45
EXOSC3-201ENST00000327304 OR2A5Q96R48 311 aa17.85■□□□□ 0.45
EXOSC3-201ENST00000327304 KCTD14Q9BQ13 255 aaPredicted RBP17.85■□□□□ 0.45
EXOSC3-201ENST00000327304 ZFYVE21Q9BQ24 234 aa17.85■□□□□ 0.45
EXOSC3-201ENST00000327304 MACROD1Q9BQ69 325 aa17.85■□□□□ 0.45
EXOSC3-201ENST00000327304 VCX3BQ9H321 246 aa17.85■□□□□ 0.45
EXOSC3-201ENST00000327304 RAPGEFL1Q9UHV5 662 aa17.85■□□□□ 0.45
EXOSC3-201ENST00000327304 NEUROG3Q9Y4Z2 214 aa17.85■□□□□ 0.45
EXOSC3-201ENST00000327304 AP1M2Q9Y6Q5 423 aa17.85■□□□□ 0.45
EXOSC3-201ENST00000327304 A8MU76 341 aa17.84■□□□□ 0.45
EXOSC3-201ENST00000327304 TGFB1P01137 390 aa17.84■□□□□ 0.45
EXOSC3-201ENST00000327304 SERPIND1P05546 499 aa17.84■□□□□ 0.45
EXOSC3-201ENST00000327304 PTX3P26022 381 aaPredicted RBP17.84■□□□□ 0.45
EXOSC3-201ENST00000327304 TIA1P31483 386 aaKnown RBP eCLIP17.84■□□□□ 0.45
EXOSC3-201ENST00000327304 SEPHS1P49903 392 aa17.84■□□□□ 0.45
EXOSC3-201ENST00000327304 DEFB110Q30KQ9 67 aa17.84■□□□□ 0.45
EXOSC3-201ENST00000327304 FRMPD2BQ6IN97 320 aa17.84■□□□□ 0.45
EXOSC3-201ENST00000327304 PRSS42Q7Z5A4 293 aa17.84■□□□□ 0.45
EXOSC3-201ENST00000327304 OR51B5Q9H339 312 aa17.84■□□□□ 0.45
EXOSC3-201ENST00000327304 SOHLH2Q9NX45 425 aa17.84■□□□□ 0.45
EXOSC3-201ENST00000327304 VAPAQ9P0L0 249 aa17.84■□□□□ 0.45
EXOSC3-201ENST00000327304 SEMA5BQ9P283 1151 aa17.84■□□□□ 0.45
EXOSC3-201ENST00000327304 GVINP1Q7Z2Y8 2422 aa17.84■□□□□ 0.45
EXOSC3-201ENST00000327304 A0A096LPI6 279 aa17.84■□□□□ 0.45
EXOSC3-201ENST00000327304 LOC105369274A0A096LPK9 316 aa17.84■□□□□ 0.45
EXOSC3-201ENST00000327304 LOC102723532A0A0G2JNH3 316 aa17.84■□□□□ 0.45
EXOSC3-201ENST00000327304 NTN3O00634 580 aaPredicted RBP17.84■□□□□ 0.45
EXOSC3-201ENST00000327304 ZBTB11O95625 1053 aaPredicted RBP17.84■□□□□ 0.45
EXOSC3-201ENST00000327304 GP1BAP07359 652 aa17.84■□□□□ 0.45
EXOSC3-201ENST00000327304 ANXA4P09525 319 aaPredicted RBP17.84■□□□□ 0.45
EXOSC3-201ENST00000327304 PHC1P78364 1004 aa17.84■□□□□ 0.45
EXOSC3-201ENST00000327304 RELAQ04206 551 aa17.84■□□□□ 0.45
EXOSC3-201ENST00000327304 SWT1Q5T5J6 900 aaKnown RBP17.84■□□□□ 0.45
EXOSC3-201ENST00000327304 PIP4P1Q86T03 277 aa17.84■□□□□ 0.45
EXOSC3-201ENST00000327304 OR4N4Q8N0Y3 316 aa17.84■□□□□ 0.45
EXOSC3-201ENST00000327304 TTLQ8NG68 377 aa17.84■□□□□ 0.45
EXOSC3-201ENST00000327304 OR8J2Q8NGG1 315 aa17.84■□□□□ 0.45
EXOSC3-201ENST00000327304 DNAJC9Q8WXX5 260 aa17.84■□□□□ 0.45
EXOSC3-201ENST00000327304 TCTN2Q96GX1 697 aa17.84■□□□□ 0.45
EXOSC3-201ENST00000327304 GFM1Q96RP9 751 aaKnown RBP17.84■□□□□ 0.45
EXOSC3-201ENST00000327304 MS4A8Q9BY19 250 aa17.84■□□□□ 0.45
EXOSC3-201ENST00000327304 SNX13Q9Y5W8 968 aa17.84■□□□□ 0.45
EXOSC3-201ENST00000327304 TRBV5-3A0A0A0MS03 114 aa17.83■□□□□ 0.44
EXOSC3-201ENST00000327304 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.83■□□□□ 0.44
EXOSC3-201ENST00000327304 CLEC3AO75596 197 aa17.83■□□□□ 0.44
EXOSC3-201ENST00000327304 SLC7A1P30825 629 aa17.83■□□□□ 0.44
EXOSC3-201ENST00000327304 MLLT3P42568 568 aaPredicted RBP17.83■□□□□ 0.44
EXOSC3-201ENST00000327304 KIR3DL1P43629 444 aa17.83■□□□□ 0.44
EXOSC3-201ENST00000327304 UGT8Q16880 541 aa17.83■□□□□ 0.44
EXOSC3-201ENST00000327304 RUNDC3AQ59EK9 446 aa17.83■□□□□ 0.44
EXOSC3-201ENST00000327304 CAMKMTQ7Z624 323 aa17.83■□□□□ 0.44
EXOSC3-201ENST00000327304 CARFQ8N187 725 aa17.83■□□□□ 0.44
EXOSC3-201ENST00000327304 METTL4Q8N3J2 472 aa17.83■□□□□ 0.44
EXOSC3-201ENST00000327304 DNAJC22Q8N4W6 341 aa17.83■□□□□ 0.44
EXOSC3-201ENST00000327304 OR4D9Q8NGE8 314 aa17.83■□□□□ 0.44
EXOSC3-201ENST00000327304 CDC6Q99741 560 aa17.83■□□□□ 0.44
EXOSC3-201ENST00000327304 TRIM8Q9BZR9 551 aa17.83■□□□□ 0.44
EXOSC3-201ENST00000327304 AICDAQ9GZX7 198 aa17.83■□□□□ 0.44
EXOSC3-201ENST00000327304 PAIP1Q9H074 479 aaKnown RBP17.83■□□□□ 0.44
EXOSC3-201ENST00000327304 SERHLQ9NQF3 203 aa17.83■□□□□ 0.44
EXOSC3-201ENST00000327304 FAM120CQ9NX05 1096 aaKnown RBP17.83■□□□□ 0.44
EXOSC3-201ENST00000327304 PDP2Q9P2J9 529 aa17.83■□□□□ 0.44
EXOSC3-201ENST00000327304 GMPR2Q9P2T1 348 aaKnown RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms