RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 CDH11P55287 796 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 SNRPD1P62314 119 aaKnown RBP6.82□□□□□ -1.32
SMC1A-201ENST00000322213 ACTA2P62736 377 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 ACTG2P63267 376 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 POU4F3Q15319 338 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 TIGD3Q6B0B8 471 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 ARL6IP6Q8N6S5 226 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 TOP6BLQ8N6T0 577 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 SIDT2Q8NBJ9 832 aaKnown RBP6.82□□□□□ -1.32
SMC1A-201ENST00000322213 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.82□□□□□ -1.326e-12■■■□□ 16.2
SMC1A-201ENST00000322213 MCCC1Q96RQ3 725 aaPredicted RBP6.82□□□□□ -1.32
SMC1A-201ENST00000322213 NTPCRQ9BSD7 190 aaKnown RBP6.82□□□□□ -1.32
SMC1A-201ENST00000322213 ERVK-19Q9WJR5 959 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 ABHD14A-ACY1A0A1B0GW23 586 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 SPATA31C2B4DYI2 1134 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 XKRYO14609 159 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 CAPN5O15484 640 aaPredicted RBP6.82□□□□□ -1.32
SMC1A-201ENST00000322213 OR6A2O95222 327 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 SLC35E2BP0CK96 405 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 PKMP14618 531 aaKnown RBP6.82□□□□□ -1.32
SMC1A-201ENST00000322213 HOXC8P31273 242 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 SCNN1AP37088 669 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 FKBP1AP62942 108 aaKnown RBP6.82□□□□□ -1.32
SMC1A-201ENST00000322213 KRBOX4Q5JUW0 171 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 PYROXD2Q8N2H3 581 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 LINC00469Q8N7U9 141 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 PSD4Q8NDX1 1056 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 TTLQ8NG68 377 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 PPP1R14AQ96A00 147 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 SIGLEC10Q96LC7 697 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 PBDC1Q9BVG4 233 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 AGO1Q9UL18 857 aaKnown RBP6.82□□□□□ -1.32
SMC1A-201ENST00000322213 LRRK1Q38SD2 2015 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 COL18A1P39060 1754 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 GVINP1Q7Z2Y8 2422 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 ROS1P08922 2347 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 C1RP00736 705 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 PDGFAP04085 211 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 CDK1P06493 297 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 INSRRP14616 1297 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 UGT2B10P36537 528 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 SLC10A7Q0GE19 358 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 TBCEQ15813 527 aaPredicted RBP6.82□□□□□ -1.32
SMC1A-201ENST00000322213 UBAP2Q5T6F2 1119 aaKnown RBP6.82□□□□□ -1.32
SMC1A-201ENST00000322213 WSCD1Q658N2 575 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 ELP2Q6IA86 826 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 DPPA2Q7Z7J5 298 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 OOSP2Q86WS3 158 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 LRRC28Q86X40 367 aaPredicted RBP6.82□□□□□ -1.32
SMC1A-201ENST00000322213 SPATA22Q8NHS9 363 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 L3HYPDHQ96EM0 354 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 CALML5Q9NZT1 146 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 CD300AQ9UGN4 299 aa6.82□□□□□ -1.32
SMC1A-201ENST00000322213 GCAP28676 217 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 ALG11Q2TAA5 492 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 CAPN13Q6MZZ7 669 aaPredicted RBP6.81□□□□□ -1.32
SMC1A-201ENST00000322213 TMED4Q7Z7H5 227 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 Q8N9G6 341 aaPredicted RBP6.81□□□□□ -1.32
SMC1A-201ENST00000322213 C10orf90Q96M02 699 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 KCNA7Q96RP8 456 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 MTERF1Q99551 399 aaKnown RBP6.81□□□□□ -1.32
SMC1A-201ENST00000322213 P2RX2Q9UBL9 471 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 FBXW11Q9UKB1 542 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 PTCH2Q9Y6C5 1203 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 ARPC5O15511 151 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 TLX2O43763 284 aaPredicted RBP6.81□□□□□ -1.32
SMC1A-201ENST00000322213 ZNF780AO75290 641 aaPredicted RBP6.81□□□□□ -1.32
SMC1A-201ENST00000322213 HOXA10P31260 410 aaPredicted RBP6.81□□□□□ -1.32
SMC1A-201ENST00000322213 GRB14Q14449 540 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 EXOC3L2Q2M3D2 409 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 PRPF38BQ5VTL8 546 aaKnown RBP6.81□□□□□ -1.32
SMC1A-201ENST00000322213 SSX9Q7RTT3 188 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 ANKK1Q8NFD2 765 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 ZFAND1Q8TCF1 268 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 PRELID3BQ9Y3B1 194 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 ARL5AQ9Y689 179 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 PCNX3Q9H6A9 2034 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 A0A1W2PQ09 198 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 G3V2L1 256 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 NME4O00746 187 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 PCDH17O14917 1159 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 PRKCAP17252 672 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 JUNBP17275 347 aaPredicted RBP6.81□□□□□ -1.32
SMC1A-201ENST00000322213 HTR1BP28222 390 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 HLA-FP30511 346 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 RGS6P49758 472 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 ERVK-21P61565 698 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 UAP1L1Q3KQV9 507 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 PLEKHN1Q494U1 663 aaPredicted RBP6.81□□□□□ -1.32
SMC1A-201ENST00000322213 PLAG1Q6DJT9 500 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 CFAP77Q6ZQR2 320 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 ZNF627Q7L945 461 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 B3GNT8Q7Z7M8 397 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 SLC51AQ86UW1 340 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 TMC8Q8IU68 726 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 POMGNT2Q8NAT1 580 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 SYT14Q8NB59 555 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 TESCQ96BS2 214 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 COLEC11Q9BWP8 271 aa6.81□□□□□ -1.32
SMC1A-201ENST00000322213 SLC25A12O75746 678 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms