RNA–Protein interactions for RNA: ENST00000321358.11

YBX1-201, Transcript of Y-box binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YBX1, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-201ENST00000321358 TMEM184BQ9Y519 407 aaPredicted RBP20.04■□□□□ 0.8
YBX1-201ENST00000321358 SRRM3A6NNA2 597 aaPredicted RBP20.03■□□□□ 0.8
YBX1-201ENST00000321358 C4orf51C9J302 202 aa20.03■□□□□ 0.8
YBX1-201ENST00000321358 STMND1H3BQB6 276 aa20.03■□□□□ 0.8
YBX1-201ENST00000321358 PSMD12O00232 456 aaPredicted RBP20.03■□□□□ 0.8
YBX1-201ENST00000321358 RDH16O75452 317 aa20.03■□□□□ 0.8
YBX1-201ENST00000321358 EEDO75530 441 aaKnown RBP20.03■□□□□ 0.8
YBX1-201ENST00000321358 SCELO95171 688 aa20.03■□□□□ 0.8
YBX1-201ENST00000321358 ANXA4P09525 319 aaPredicted RBP20.03■□□□□ 0.8
YBX1-201ENST00000321358 SPINK2P20155 84 aa20.03■□□□□ 0.8
YBX1-201ENST00000321358 CERS1P27544 350 aa20.03■□□□□ 0.8
YBX1-201ENST00000321358 TIA1P31483 386 aaKnown RBP eCLIP20.03■□□□□ 0.82e-7■■■□□ 17.5
YBX1-201ENST00000321358 RORAP35398 523 aa20.03■□□□□ 0.8
YBX1-201ENST00000321358 ARFIP2P53365 341 aa20.03■□□□□ 0.8
YBX1-201ENST00000321358 ERVK-8P63133 956 aa20.03■□□□□ 0.8
YBX1-201ENST00000321358 EMX2Q04743 252 aa20.03■□□□□ 0.8
YBX1-201ENST00000321358 LARP4Q71RC2 724 aaKnown RBP eCLIP20.03■□□□□ 0.8
YBX1-201ENST00000321358 DSELQ8IZU8 1212 aa20.03■□□□□ 0.8
YBX1-201ENST00000321358 ESX1Q8N693 406 aa20.03■□□□□ 0.8
YBX1-201ENST00000321358 RFWD2Q8NHY2 731 aa20.03■□□□□ 0.8
YBX1-201ENST00000321358 MAELQ96JY0 434 aaKnown RBP20.03■□□□□ 0.8
YBX1-201ENST00000321358 LHX9Q9NQ69 397 aa20.03■□□□□ 0.8
YBX1-201ENST00000321358 LYARQ9NX58 379 aaKnown RBP20.03■□□□□ 0.8
YBX1-201ENST00000321358 MS4A12Q9NXJ0 267 aa20.03■□□□□ 0.8
YBX1-201ENST00000321358 NOP53Q9NZM5 478 aaKnown RBP20.03■□□□□ 0.8
YBX1-201ENST00000321358 IFT80Q9P2H3 777 aaPredicted RBP20.03■□□□□ 0.8
YBX1-201ENST00000321358 GPN3Q9UHW5 284 aaPredicted RBP20.03■□□□□ 0.8
YBX1-201ENST00000321358 MSRB2Q9Y3D2 182 aa20.03■□□□□ 0.8
YBX1-201ENST00000321358 MAP4K5Q9Y4K4 846 aa20.03■□□□□ 0.8
YBX1-201ENST00000321358 MDC1Q14676 2089 aaKnown RBP20.03■□□□□ 0.8
YBX1-201ENST00000321358 CDRT15L2A8MXV6 281 aa20.02■□□□□ 0.8
YBX1-201ENST00000321358 C9J4A7 227 aa20.02■□□□□ 0.8
YBX1-201ENST00000321358 SHOX2O60902 331 aaPredicted RBP20.02■□□□□ 0.8
YBX1-201ENST00000321358 GBAP04062 536 aa20.02■□□□□ 0.8
YBX1-201ENST00000321358 FAM58BPP0C7Q3 252 aa20.02■□□□□ 0.8
YBX1-201ENST00000321358 KIAA0040Q15053 153 aa20.02■□□□□ 0.8
YBX1-201ENST00000321358 ZNF793Q6ZN11 406 aa20.02■□□□□ 0.8
YBX1-201ENST00000321358 SPATA19Q7Z5L4 167 aa20.02■□□□□ 0.8
YBX1-201ENST00000321358 STON2Q8WXE9 905 aa20.02■□□□□ 0.8
YBX1-201ENST00000321358 ELAC2Q9BQ52 826 aaKnown RBP20.02■□□□□ 0.8
YBX1-201ENST00000321358 CCDC28BQ9BUN5 200 aa20.02■□□□□ 0.8
YBX1-201ENST00000321358 ZNF717Q9BY31 904 aaPredicted RBP20.02■□□□□ 0.8
YBX1-201ENST00000321358 LYRM4Q9HD34 91 aa20.02■□□□□ 0.8
YBX1-201ENST00000321358 TRPC4Q9UBN4 977 aa20.02■□□□□ 0.8
YBX1-201ENST00000321358 GIMAP2Q9UG22 337 aa20.02■□□□□ 0.8
YBX1-201ENST00000321358 PHF11Q9UIL8 331 aa20.02■□□□□ 0.8
YBX1-201ENST00000321358 POLR3HQ9Y535 204 aaPredicted RBP20.02■□□□□ 0.8
YBX1-201ENST00000321358 A0A0A6YYD5 115 aa20.02■□□□□ 0.79
YBX1-201ENST00000321358 CHST10O43529 356 aa20.02■□□□□ 0.79
YBX1-201ENST00000321358 BRINP1O60477 761 aa20.02■□□□□ 0.79
YBX1-201ENST00000321358 ADRB1P08588 477 aa20.02■□□□□ 0.79
YBX1-201ENST00000321358 RNH1P13489 461 aaKnown RBP20.02■□□□□ 0.79
YBX1-201ENST00000321358 ACPPP15309 386 aa20.02■□□□□ 0.79
YBX1-201ENST00000321358 DRD4P21917 467 aa20.02■□□□□ 0.79
YBX1-201ENST00000321358 TPP2P29144 1249 aaPredicted RBP20.02■□□□□ 0.79
YBX1-201ENST00000321358 TLX1P31314 330 aaPredicted RBP20.02■□□□□ 0.79
YBX1-201ENST00000321358 GSTM5P46439 218 aa20.02■□□□□ 0.79
YBX1-201ENST00000321358 TRA2BP62995 288 aaKnown RBP20.02■□□□□ 0.79
YBX1-201ENST00000321358 IL23RQ5VWK5 629 aa20.02■□□□□ 0.79
YBX1-201ENST00000321358 SPATA21Q7Z572 469 aa20.02■□□□□ 0.79
YBX1-201ENST00000321358 GPR180Q86V85 440 aa20.02■□□□□ 0.79
YBX1-201ENST00000321358 NLGN4XQ8N0W4 816 aa20.02■□□□□ 0.79
YBX1-201ENST00000321358 DTWD1Q8N5C7 304 aa20.02■□□□□ 0.79
YBX1-201ENST00000321358 NLGN4YQ8NFZ3 816 aaPredicted RBP20.02■□□□□ 0.79
YBX1-201ENST00000321358 ADAMTS18Q8TE60 1221 aa20.02■□□□□ 0.79
YBX1-201ENST00000321358 ZNF578Q96N58 590 aaPredicted RBP20.02■□□□□ 0.79
YBX1-201ENST00000321358 EBF4Q9BQW3 602 aa20.02■□□□□ 0.79
YBX1-201ENST00000321358 TMEM120AQ9BXJ8 343 aa20.02■□□□□ 0.79
YBX1-201ENST00000321358 EBPLQ9BY08 206 aa20.02■□□□□ 0.79
YBX1-201ENST00000321358 WDR41Q9HAD4 459 aa20.02■□□□□ 0.79
YBX1-201ENST00000321358 ASCL3Q9NQ33 180 aa20.02■□□□□ 0.79
YBX1-201ENST00000321358 HCN3Q9P1Z3 774 aa20.02■□□□□ 0.79
YBX1-201ENST00000321358 FBXW2Q9UKT8 454 aa20.02■□□□□ 0.79
YBX1-201ENST00000321358 TRIM33Q9UPN9 1127 aa20.02■□□□□ 0.79
YBX1-201ENST00000321358 WASF3Q9UPY6 502 aa20.02■□□□□ 0.79
YBX1-201ENST00000321358 WBP11Q9Y2W2 641 aaKnown RBP20.02■□□□□ 0.79
YBX1-201ENST00000321358 DLGAP3O95886 979 aa20.01■□□□□ 0.79
YBX1-201ENST00000321358 CD63P08962 238 aa20.01■□□□□ 0.79
YBX1-201ENST00000321358 PRPS2P11908 318 aa20.01■□□□□ 0.79
YBX1-201ENST00000321358 PCSK2P16519 638 aa20.01■□□□□ 0.79
YBX1-201ENST00000321358 IL10P22301 178 aa20.01■□□□□ 0.79
YBX1-201ENST00000321358 BUD31P41223 144 aaPredicted RBP20.01■□□□□ 0.79
YBX1-201ENST00000321358 SNRPNP63162 240 aaKnown RBP20.01■□□□□ 0.79
YBX1-201ENST00000321358 OLR1P78380 273 aa20.01■□□□□ 0.79
YBX1-201ENST00000321358 OCA2Q04671 838 aa20.01■□□□□ 0.79
YBX1-201ENST00000321358 ZNF763Q0D2J5 394 aa20.01■□□□□ 0.79
YBX1-201ENST00000321358 SF3A3Q12874 501 aaKnown RBP eCLIP20.01■□□□□ 0.79
YBX1-201ENST00000321358 MAP7Q14244 749 aa20.01■□□□□ 0.79
YBX1-201ENST00000321358 RPS6KA2Q15349 733 aa20.01■□□□□ 0.79
YBX1-201ENST00000321358 LSM12Q3MHD2 195 aaKnown RBP20.01■□□□□ 0.79
YBX1-201ENST00000321358 OGFOD2Q6N063 350 aa20.01■□□□□ 0.79
YBX1-201ENST00000321358 FAM9CQ8IZT9 166 aa20.01■□□□□ 0.79
YBX1-201ENST00000321358 EFCAB3Q8N7B9 438 aa20.01■□□□□ 0.79
YBX1-201ENST00000321358 OR5T3Q8NGG3 340 aa20.01■□□□□ 0.79
YBX1-201ENST00000321358 OR51Q1Q8NH59 317 aa20.01■□□□□ 0.79
YBX1-201ENST00000321358 C11orf24Q96F05 449 aaPredicted RBP20.01■□□□□ 0.79
YBX1-201ENST00000321358 OR52B2Q96RD2 323 aa20.01■□□□□ 0.79
YBX1-201ENST00000321358 C1orf50Q9BV19 199 aa20.01■□□□□ 0.79
YBX1-201ENST00000321358 FAIM2Q9BWQ8 316 aa20.01■□□□□ 0.79
YBX1-201ENST00000321358 ZNF282Q9UDV7 671 aaPredicted RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms