RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 TRIM40Q6P9F5 258 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 SHQ1Q6PI26 577 aaKnown RBP7.22□□□□□ -1.25
IFT88-201ENST00000319980 IKBIPQ70UQ0 350 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 PAGE2Q7Z2X7 111 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 CYP4Z1Q86W10 505 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 ZC3H7AQ8IWR0 971 aaKnown RBP7.22□□□□□ -1.25
IFT88-201ENST00000319980 OR52N2Q8NGI0 321 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 SPPL2AQ8TCT8 520 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 JPH3Q8WXH2 748 aaPredicted RBP7.22□□□□□ -1.25
IFT88-201ENST00000319980 TM4SF18Q96CE8 201 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 MACROD1Q9BQ69 325 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 SPATA9Q9BWV2 254 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 RUBCNLQ9H714 662 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 RMI1Q9H9A7 625 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 TM9SF3Q9HD45 589 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 TUBA8Q9NY65 449 aaPredicted RBP7.22□□□□□ -1.25
IFT88-201ENST00000319980 IFT80Q9P2H3 777 aaPredicted RBP7.22□□□□□ -1.25
IFT88-201ENST00000319980 TMEFF2Q9UIK5 374 aaPredicted RBP7.22□□□□□ -1.25
IFT88-201ENST00000319980 GMEB1Q9Y692 573 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 PIAS3Q9Y6X2 628 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 ATG2AQ2TAZ0 1938 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 BRWD1Q9NSI6 2320 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 KIF26AQ9ULI4 1882 aaPredicted RBP7.22□□□□□ -1.25
IFT88-201ENST00000319980 TNFRSF21O75509 655 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 SEMA3DO95025 777 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 ACADMP11310 421 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 IL7RP16871 459 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 TNFRSF1BP20333 461 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 IGFBP5P24593 272 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 ACSL1P33121 698 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 PCGF2P35227 344 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 LTBRP36941 435 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 RAD23AP54725 363 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 MANFP55145 182 aaKnown RBP7.22□□□□□ -1.25
IFT88-201ENST00000319980 KCNJ10P78508 379 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 REEP5Q00765 189 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 MEP1AQ16819 746 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 BORAQ6PGQ7 559 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 ENPP7Q6UWV6 458 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 DEFB123Q8N688 67 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 AMER3Q8N944 861 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 NFKBIDQ8NI38 313 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 MRGPRX1Q96LB2 322 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 C17orf62Q9BQA9 187 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 DOHHQ9BU89 302 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 REEP1Q9H902 201 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 LHX9Q9NQ69 397 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 C1GALT1Q9NS00 363 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 PDP1Q9P0J1 537 aaPredicted RBP7.22□□□□□ -1.25
IFT88-201ENST00000319980 SCHIP1Q9P0W5 487 aaPredicted RBP7.22□□□□□ -1.25
IFT88-201ENST00000319980 PNMA8BQ9ULN7 279 aaPredicted RBP7.22□□□□□ -1.25
IFT88-201ENST00000319980 KIAA1549LQ6ZVL6 1849 aa7.22□□□□□ -1.25
IFT88-201ENST00000319980 PRSS38A1L453 326 aa7.21□□□□□ -1.25
IFT88-201ENST00000319980 M0QX08 132 aa7.21□□□□□ -1.25
IFT88-201ENST00000319980 TMPRSS11DO60235 418 aa7.21□□□□□ -1.25
IFT88-201ENST00000319980 SEMG1P04279 462 aa7.21□□□□□ -1.25
IFT88-201ENST00000319980 CYP4B1P13584 511 aa7.21□□□□□ -1.25
IFT88-201ENST00000319980 HOXB3P14651 431 aaPredicted RBP7.21□□□□□ -1.25
IFT88-201ENST00000319980 AK4P27144 223 aaPredicted RBP7.21□□□□□ -1.25
IFT88-201ENST00000319980 DNAJA1P31689 397 aaKnown RBP7.21□□□□□ -1.25
IFT88-201ENST00000319980 OR1E2P47887 323 aa7.21□□□□□ -1.25
IFT88-201ENST00000319980 SELENOWP63302 87 aa7.21□□□□□ -1.25
IFT88-201ENST00000319980 BIRC2Q13490 618 aa7.21□□□□□ -1.25
IFT88-201ENST00000319980 SCARB2Q14108 478 aa7.21□□□□□ -1.25
IFT88-201ENST00000319980 SIM2Q14190 667 aaPredicted RBP7.21□□□□□ -1.25
IFT88-201ENST00000319980 CYP27C1Q4G0S4 372 aa7.21□□□□□ -1.25
IFT88-201ENST00000319980 GCNT6Q5T4J0 391 aa7.21□□□□□ -1.25
IFT88-201ENST00000319980 KIAA1324Q6UXG2 1013 aaKnown RBP7.21□□□□□ -1.25
IFT88-201ENST00000319980 B3GNT6Q6ZMB0 384 aa7.21□□□□□ -1.25
IFT88-201ENST00000319980 LPCAT2Q7L5N7 544 aa7.21□□□□□ -1.25
IFT88-201ENST00000319980 GPR141Q7Z602 305 aa7.21□□□□□ -1.25
IFT88-201ENST00000319980 NUDT13Q86X67 352 aa7.21□□□□□ -1.25
IFT88-201ENST00000319980 TMEM145Q8NBT3 493 aa7.21□□□□□ -1.25
IFT88-201ENST00000319980 FAM131CQ96AQ9 280 aa7.21□□□□□ -1.25
IFT88-201ENST00000319980 EXOSC8Q96B26 276 aaKnown RBP7.21□□□□□ -1.25
IFT88-201ENST00000319980 RGMAQ96B86 450 aa7.21□□□□□ -1.25
IFT88-201ENST00000319980 PDXPQ96GD0 296 aa7.21□□□□□ -1.25
IFT88-201ENST00000319980 MPP4Q96JB8 637 aa7.21□□□□□ -1.25
IFT88-201ENST00000319980 C7orf34Q96L11 122 aa7.21□□□□□ -1.25
IFT88-201ENST00000319980 CXorf36Q9H7Y0 433 aa7.21□□□□□ -1.25
IFT88-201ENST00000319980 POLR1BQ9H9Y6 1135 aa7.21□□□□□ -1.25
IFT88-201ENST00000319980 MRPS30Q9NP92 439 aaKnown RBP7.21□□□□□ -1.25
IFT88-201ENST00000319980 SLAMF7Q9NQ25 335 aa7.21□□□□□ -1.25
IFT88-201ENST00000319980 EXD2Q9NVH0 621 aa7.21□□□□□ -1.25
IFT88-201ENST00000319980 DDX18Q9NVP1 670 aaKnown RBP7.21□□□□□ -1.25
IFT88-201ENST00000319980 TEX10Q9NXF1 929 aaPredicted RBP7.21□□□□□ -1.25
IFT88-201ENST00000319980 RSL24D1Q9UHA3 163 aaKnown RBP7.21□□□□□ -1.25
IFT88-201ENST00000319980 NCKAP1Q9Y2A7 1128 aa7.21□□□□□ -1.25
IFT88-201ENST00000319980 KLHL20Q9Y2M5 609 aa7.21□□□□□ -1.25
IFT88-201ENST00000319980 TRBV23OR9-2A0A075B6M9 112 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 TRIM64CA6NLI5 447 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 TMEM229AB2RXF0 380 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 NDUFS4O43181 175 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 PCSK6P29122 969 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 HLCSP50747 726 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 DAPP51397 102 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 RPS26P62854 115 aaKnown RBP7.21□□□□□ -1.26
IFT88-201ENST00000319980 CDK6Q00534 326 aa7.21□□□□□ -1.26
IFT88-201ENST00000319980 ROR2Q01974 943 aaKnown RBP7.21□□□□□ -1.26
IFT88-201ENST00000319980 GRSF1Q12849 480 aaKnown RBP eCLIP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms