RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 ZC3HC1Q86WB0 502 aaKnown RBP12.33□□□□□ -0.44
SYCN-201ENST00000318438 CXorf67Q86X51 503 aaPredicted RBP12.33□□□□□ -0.44
SYCN-201ENST00000318438 SLC5A8Q8N695 610 aa12.33□□□□□ -0.44
SYCN-201ENST00000318438 POGLUT1Q8NBL1 392 aa12.33□□□□□ -0.44
SYCN-201ENST00000318438 PPFIBP2Q8ND30 876 aa12.33□□□□□ -0.44
SYCN-201ENST00000318438 OR52N2Q8NGI0 321 aa12.33□□□□□ -0.44
SYCN-201ENST00000318438 FAM222BQ8WU58 562 aa12.33□□□□□ -0.44
SYCN-201ENST00000318438 CYTH2Q99418 400 aa12.33□□□□□ -0.44
SYCN-201ENST00000318438 PLCD4Q9BRC7 762 aa12.33□□□□□ -0.44
SYCN-201ENST00000318438 CDCP1Q9H5V8 836 aa12.33□□□□□ -0.44
SYCN-201ENST00000318438 PARVBQ9HBI1 364 aa12.33□□□□□ -0.44
SYCN-201ENST00000318438 SAYSD1Q9NPB0 183 aa12.33□□□□□ -0.44
SYCN-201ENST00000318438 CCDC177Q9NQR7 707 aaPredicted RBP12.33□□□□□ -0.44
SYCN-201ENST00000318438 PLSCR2Q9NRY7 297 aa12.33□□□□□ -0.44
SYCN-201ENST00000318438 UTP6Q9NYH9 597 aaKnown RBP12.33□□□□□ -0.44
SYCN-201ENST00000318438 PDE10AQ9Y233 779 aa12.33□□□□□ -0.44
SYCN-201ENST00000318438 SONP18583 2426 aaKnown RBP12.32□□□□□ -0.44
SYCN-201ENST00000318438 TRIM64A6NGJ6 449 aa12.32□□□□□ -0.44
SYCN-201ENST00000318438 TRIM64BA6NI03 449 aa12.32□□□□□ -0.44
SYCN-201ENST00000318438 ARHGEF9O43307 516 aa12.32□□□□□ -0.44
SYCN-201ENST00000318438 FOXS1O43638 330 aa12.32□□□□□ -0.44
SYCN-201ENST00000318438 EZRP15311 586 aaKnown RBP12.32□□□□□ -0.44
SYCN-201ENST00000318438 ZNF37AP17032 561 aaPredicted RBP12.32□□□□□ -0.44
SYCN-201ENST00000318438 ACVR2AP27037 513 aa12.32□□□□□ -0.44
SYCN-201ENST00000318438 ADH7P40394 386 aa12.32□□□□□ -0.44
SYCN-201ENST00000318438 PLTPP55058 493 aa12.32□□□□□ -0.44
SYCN-201ENST00000318438 TBPL1P62380 186 aa12.32□□□□□ -0.44
SYCN-201ENST00000318438 RELAQ04206 551 aa12.32□□□□□ -0.44
SYCN-201ENST00000318438 WHAMMP3Q1A5X7 153 aa12.32□□□□□ -0.44
SYCN-201ENST00000318438 SLC25A35Q3KQZ1 300 aa12.32□□□□□ -0.44
SYCN-201ENST00000318438 MINDY4Q4G0A6 757 aa12.32□□□□□ -0.44
SYCN-201ENST00000318438 GXYLT1Q4G148 440 aa12.32□□□□□ -0.44
SYCN-201ENST00000318438 THEMIS2Q5TEJ8 643 aa12.32□□□□□ -0.44
SYCN-201ENST00000318438 ZNF425Q6IV72 752 aa12.32□□□□□ -0.44
SYCN-201ENST00000318438 C8orf74Q6P047 294 aa12.32□□□□□ -0.44
SYCN-201ENST00000318438 CAPN12Q6ZSI9 719 aa12.32□□□□□ -0.44
SYCN-201ENST00000318438 CYS1Q717R9 158 aa12.32□□□□□ -0.44
SYCN-201ENST00000318438 ANKRD37Q7Z713 158 aa12.32□□□□□ -0.44
SYCN-201ENST00000318438 P3H2Q8IVL5 708 aa12.32□□□□□ -0.44
SYCN-201ENST00000318438 SULF2Q8IWU5 870 aa12.32□□□□□ -0.44
SYCN-201ENST00000318438 M1APQ8TC57 530 aa12.32□□□□□ -0.44
SYCN-201ENST00000318438 FBXO25Q8TCJ0 367 aa12.32□□□□□ -0.44
SYCN-201ENST00000318438 CDKL2Q92772 493 aa12.32□□□□□ -0.44
SYCN-201ENST00000318438 MVB12AQ96EY5 273 aa12.32□□□□□ -0.44
SYCN-201ENST00000318438 PDLIM5Q96HC4 596 aaKnown RBP12.32□□□□□ -0.44
SYCN-201ENST00000318438 MCMBPQ9BTE3 642 aa12.32□□□□□ -0.44
SYCN-201ENST00000318438 PCBD2Q9H0N5 130 aa12.32□□□□□ -0.44
SYCN-201ENST00000318438 ATG10Q9H0Y0 220 aa12.32□□□□□ -0.44
SYCN-201ENST00000318438 DEFB127Q9H1M4 99 aa12.32□□□□□ -0.44
SYCN-201ENST00000318438 RHOJQ9H4E5 214 aa12.32□□□□□ -0.44
SYCN-201ENST00000318438 MMP25Q9NPA2 562 aa12.32□□□□□ -0.44
SYCN-201ENST00000318438 RUVBL1Q9Y265 456 aaKnown RBP12.32□□□□□ -0.44
SYCN-201ENST00000318438 FAM215AQ9Y5M1 114 aa12.32□□□□□ -0.44
SYCN-201ENST00000318438 PHF3Q92576 2039 aaKnown RBP12.32□□□□□ -0.44
SYCN-201ENST00000318438 SCN2AQ99250 2005 aa12.32□□□□□ -0.44
SYCN-201ENST00000318438 FAM95CA0A1B0GW59 222 aa12.31□□□□□ -0.44
SYCN-201ENST00000318438 TCRBV9S1A1TA0A576 114 aa12.31□□□□□ -0.44
SYCN-201ENST00000318438 PABPN1LA6NDY0 278 aaKnown RBP12.31□□□□□ -0.44
SYCN-201ENST00000318438 URI1O94763 535 aaPredicted RBP12.31□□□□□ -0.44
SYCN-201ENST00000318438 ENO2P09104 434 aaPredicted RBP12.31□□□□□ -0.44
SYCN-201ENST00000318438 GSTA2P09210 222 aa12.31□□□□□ -0.44
SYCN-201ENST00000318438 HIST1H2AGP0C0S8 130 aaPredicted RBP12.31□□□□□ -0.44
SYCN-201ENST00000318438 HIST1H2ADP20671 130 aa12.31□□□□□ -0.44
SYCN-201ENST00000318438 CCND1P24385 295 aa12.31□□□□□ -0.44
SYCN-201ENST00000318438 TPP2P29144 1249 aaPredicted RBP12.31□□□□□ -0.44
SYCN-201ENST00000318438 SSTR1P30872 391 aa12.31□□□□□ -0.44
SYCN-201ENST00000318438 CYB561P49447 251 aa12.31□□□□□ -0.44
SYCN-201ENST00000318438 AP1S2P56377 157 aa12.31□□□□□ -0.44
SYCN-201ENST00000318438 SNRPNP63162 240 aaKnown RBP12.31□□□□□ -0.44
SYCN-201ENST00000318438 DAZAP2Q15038 168 aaPredicted RBP12.31□□□□□ -0.44
SYCN-201ENST00000318438 EXT1Q16394 746 aa12.31□□□□□ -0.44
SYCN-201ENST00000318438 PHKG1Q16816 387 aa12.31□□□□□ -0.44
SYCN-201ENST00000318438 HMBOX1Q6NT76 420 aa12.31□□□□□ -0.44
SYCN-201ENST00000318438 ZNF585AQ6P3V2 769 aa12.31□□□□□ -0.44
SYCN-201ENST00000318438 AGTRAPQ6RW13 159 aa12.31□□□□□ -0.44
SYCN-201ENST00000318438 B3GNT6Q6ZMB0 384 aa12.31□□□□□ -0.44
SYCN-201ENST00000318438 MBOAT1Q6ZNC8 495 aa12.31□□□□□ -0.44
SYCN-201ENST00000318438 PAQR7Q86WK9 346 aa12.31□□□□□ -0.44
SYCN-201ENST00000318438 ARHGEF39Q8N4T4 335 aa12.31□□□□□ -0.44
SYCN-201ENST00000318438 CSNK1A1LQ8N752 337 aa12.31□□□□□ -0.44
SYCN-201ENST00000318438 TMEM125Q96AQ2 219 aa12.31□□□□□ -0.44
SYCN-201ENST00000318438 VPS39Q96JC1 886 aa12.31□□□□□ -0.44
SYCN-201ENST00000318438 HIST1H2AHQ96KK5 128 aa12.31□□□□□ -0.44
SYCN-201ENST00000318438 HIST1H2AJQ99878 128 aa12.31□□□□□ -0.44
SYCN-201ENST00000318438 H2AFJQ9BTM1 129 aa12.31□□□□□ -0.44
SYCN-201ENST00000318438 C19orf25Q9UFG5 118 aaPredicted RBP12.31□□□□□ -0.44
SYCN-201ENST00000318438 PEX1O43933 1283 aa12.3□□□□□ -0.44
SYCN-201ENST00000318438 TUBB4AP04350 444 aa12.3□□□□□ -0.44
SYCN-201ENST00000318438 HRH2P25021 359 aa12.3□□□□□ -0.44
SYCN-201ENST00000318438 TACR1P25103 407 aa12.3□□□□□ -0.44
SYCN-201ENST00000318438 PGGT1BP53609 377 aa12.3□□□□□ -0.44
SYCN-201ENST00000318438 GPR85P60893 370 aa12.3□□□□□ -0.44
SYCN-201ENST00000318438 GARNL3Q5VVW2 1013 aa12.3□□□□□ -0.44
SYCN-201ENST00000318438 RTL6Q6ICC9 239 aa12.3□□□□□ -0.44
SYCN-201ENST00000318438 ZDHHC24Q6UX98 284 aa12.3□□□□□ -0.44
SYCN-201ENST00000318438 C3orf62Q6ZUJ4 267 aa12.3□□□□□ -0.44
SYCN-201ENST00000318438 ADCK2Q7Z695 626 aa12.3□□□□□ -0.44
SYCN-201ENST00000318438 RPS19BP1Q86WX3 136 aaKnown RBP12.3□□□□□ -0.44
SYCN-201ENST00000318438 KIF2BQ8N4N8 673 aa12.3□□□□□ -0.44
SYCN-201ENST00000318438 NKAPQ8N5F7 415 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms