RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 PEPDP12955 493 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 EDNRAP25101 427 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 TSPAN33Q86UF1 283 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 ZSWIM9Q86XI8 627 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 FUNDC2Q9BWH2 189 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 AASSQ9UDR5 926 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 ACSL5Q9ULC5 683 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 TRPM3Q9HCF6 1732 aaPredicted RBP13.25□□□□□ -0.29
SPAST-201ENST00000315285 FAAHO00519 579 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 ERN2Q76MJ5 926 aaKnown RBP13.25□□□□□ -0.29
SPAST-201ENST00000315285 SCML4Q8N228 414 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 BBS10Q8TAM1 723 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 TMEM125Q96AQ2 219 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 RMI1Q9H9A7 625 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 BRD7Q9NPI1 651 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 C14orf105Q9NVL8 296 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 NLGN3Q9NZ94 848 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 EXOSC1Q9Y3B2 195 aaKnown RBP13.25□□□□□ -0.29
SPAST-201ENST00000315285 CACNA1SQ13698 1873 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 DLGAP1O14490 977 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 OR12D1P0DN82 309 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 IFI30P13284 250 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 GPX3P22352 226 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 GSTM2P28161 218 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 PMS2P3Q13401 168 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 CLCA4Q14CN2 919 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 PON3Q15166 354 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 VTCN1Q7Z7D3 282 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 DTWD1Q8N5C7 304 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 PROKR2Q8NFJ6 384 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 HUS1BQ8NHY5 278 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 HMGB4Q8WW32 186 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 NKD1Q969G9 470 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 DGAT2Q96PD7 388 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 ERMAPQ96PL5 475 aaPredicted RBP13.25□□□□□ -0.29
SPAST-201ENST00000315285 ZDHHC7Q9NXF8 308 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 IL17CQ9P0M4 197 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 EIF3KQ9UBQ5 218 aaKnown RBP13.25□□□□□ -0.29
SPAST-201ENST00000315285 GRIP1Q9Y3R0 1128 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 RBM7Q9Y580 266 aaKnown RBP13.25□□□□□ -0.29
SPAST-201ENST00000315285 CLCA3PQ9Y6N3 262 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 SH3PXD2BA1X283 911 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 ALPPL2P10696 532 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 KCNA5P22460 613 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 SPINT3P49223 89 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 CLECL1Q8IZS7 167 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 ZBTB8BQ8NAP8 495 aaPredicted RBP13.25□□□□□ -0.29
SPAST-201ENST00000315285 Q9N2J8 555 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 TIGARQ9NQ88 270 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 TBC1D24Q9ULP9 559 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 HSPE1-MOB4S4R3N1 261 aa13.25□□□□□ -0.29
SPAST-201ENST00000315285 MLLT1Q03111 559 aaPredicted RBP13.24□□□□□ -0.29
SPAST-201ENST00000315285 PUM1Q14671 1186 aaKnown RBP eCLIP13.24□□□□□ -0.29
SPAST-201ENST00000315285 SLC36A3Q495N2 470 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 GTDC1Q4AE62 458 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 DPY19L2P1Q6NXN4 242 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 GALNT10Q86SR1 603 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 CCDC116Q8IYX3 515 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 ZNF527Q8NB42 609 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 ACVR1CQ8NER5 493 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 POF1BQ8WVV4 589 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 SLC25A36Q96CQ1 311 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 TBL1XR1Q9BZK7 514 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 C20orf27Q9GZN8 174 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 OR51I1Q9H343 314 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 A0A1W2PRQ8 180 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 ZNF821O75541 412 aaPredicted RBP13.24□□□□□ -0.29
SPAST-201ENST00000315285 RHOP08100 348 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 RPS17P08708 135 aaKnown RBP13.24□□□□□ -0.29
SPAST-201ENST00000315285 CKMT1AP12532 417 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 ATP5A1P25705 553 aaKnown RBP13.24□□□□□ -0.29
SPAST-201ENST00000315285 HNRNPA0Q13151 305 aaKnown RBP13.24□□□□□ -0.29
SPAST-201ENST00000315285 SYCE2Q6PIF2 218 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 LARP4Q71RC2 724 aaKnown RBP eCLIP13.24□□□□□ -0.29
SPAST-201ENST00000315285 CNTN4Q8IWV2 1026 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 MGLLQ99685 303 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 XKR8Q9H6D3 395 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 PHF24Q9UPV7 400 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 WASH4PA8MWX3 477 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 SCAMP2O15127 329 aaKnown RBP13.24□□□□□ -0.29
SPAST-201ENST00000315285 TCEA1P23193 301 aaKnown RBP13.24□□□□□ -0.29
SPAST-201ENST00000315285 F8A1P23610 371 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 SLC27A4Q6P1M0 643 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 MSANTD1Q6ZTZ1 278 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 ZNF534Q76KX8 674 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 GNPDA2Q8TDQ7 276 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 TRUB1Q8WWH5 349 aaKnown RBP13.24□□□□□ -0.29
SPAST-201ENST00000315285 MOAP1Q96BY2 351 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 KXD1Q9BQD3 176 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 WACQ9BTA9 647 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 ARHGAP39Q9C0H5 1083 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 BHLHE41Q9C0J9 482 aaPredicted RBP13.24□□□□□ -0.29
SPAST-201ENST00000315285 PNO1Q9NRX1 252 aaKnown RBP13.24□□□□□ -0.29
SPAST-201ENST00000315285 PCDHB14Q9Y5E9 798 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 B4DGG1 531 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 STSP08842 583 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 HK1P19367 917 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 ITIH1P19827 911 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 S100GP29377 79 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 OR12D2P58182 307 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms