RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 UNC5DQ6UXZ4 953 aa13.26□□□□□ -0.29
MKS1-201ENST00000313863 TMEM173Q86WV6 379 aaPredicted RBP13.26□□□□□ -0.29
MKS1-201ENST00000313863 NLGN4XQ8N0W4 816 aa13.26□□□□□ -0.29
MKS1-201ENST00000313863 ASCC1Q8N9N2 400 aaKnown RBP13.26□□□□□ -0.29
MKS1-201ENST00000313863 OR56A3Q8NH54 315 aa13.26□□□□□ -0.29
MKS1-201ENST00000313863 HUS1BQ8NHY5 278 aa13.26□□□□□ -0.29
MKS1-201ENST00000313863 BCL7CQ8WUZ0 217 aaPredicted RBP13.26□□□□□ -0.29
MKS1-201ENST00000313863 RASSF5Q8WWW0 418 aa13.26□□□□□ -0.29
MKS1-201ENST00000313863 BHMTQ93088 406 aa13.26□□□□□ -0.29
MKS1-201ENST00000313863 PPCDCQ96CD2 204 aa13.26□□□□□ -0.29
MKS1-201ENST00000313863 TMEM80Q96HE8 168 aa13.26□□□□□ -0.29
MKS1-201ENST00000313863 CNPPD1Q9BV87 410 aa13.26□□□□□ -0.29
MKS1-201ENST00000313863 FZD3Q9NPG1 666 aa13.26□□□□□ -0.29
MKS1-201ENST00000313863 C1GALT1Q9NS00 363 aa13.26□□□□□ -0.29
MKS1-201ENST00000313863 ERVK13-1Q9NX77 482 aa13.26□□□□□ -0.29
MKS1-201ENST00000313863 OGDHLQ9ULD0 1010 aa13.26□□□□□ -0.29
MKS1-201ENST00000313863 STUB1Q9UNE7 303 aa13.26□□□□□ -0.29
MKS1-201ENST00000313863 HMX3A6NHT5 357 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 H3BQ06 376 aaPredicted RBP13.25□□□□□ -0.29
MKS1-201ENST00000313863 FOXE1O00358 373 aaPredicted RBP13.25□□□□□ -0.29
MKS1-201ENST00000313863 PCDH17O14917 1159 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 GPX5O75715 221 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 MFN2O95140 757 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 C6orf47O95873 294 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 ARAFP10398 606 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 CYP2A6P11509 494 aaPredicted RBP13.25□□□□□ -0.29
MKS1-201ENST00000313863 SRCP12931 536 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 CNR2P34972 360 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 EPHB3P54753 998 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 DCDC1P59894 354 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 HBA1P69905 142 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 EEF1A2Q05639 463 aaKnown RBP13.25□□□□□ -0.29
MKS1-201ENST00000313863 E2F2Q14209 437 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 SSX1Q16384 188 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 TMEM201Q5SNT2 666 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 C6orf183Q5T699 404 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 RGMBQ6NW40 437 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 C22orf39Q6P5X5 142 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 KLHL17Q6TDP4 642 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 HS6ST3Q8IZP7 471 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 IL17RCQ8NAC3 791 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 SIMC1Q8NDZ2 872 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 GPR156Q8NFN8 814 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 ADAMTS19Q8TE59 1207 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 TMEM159Q96B96 161 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 OPALINQ96PE5 141 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 TMEM245Q9H330 911 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 MYNNQ9NPC7 610 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 PRDM8Q9NQV8 689 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 ITM2CQ9NQX7 267 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 C14orf119Q9NWQ9 140 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 HCSTQ9UBK5 93 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 TBC1D24Q9ULP9 559 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 SSR3Q9UNL2 185 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 MGAT4BQ9UQ53 548 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 RPL36Q9Y3U8 105 aaKnown RBP13.25□□□□□ -0.29
MKS1-201ENST00000313863 NOX1Q9Y5S8 564 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 THSD7BQ9C0I4 1608 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 IQCMA0A1B0GVH7 501 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 TRBC2A0A5B9 178 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 ZNF670-ZNF695F2Z2N8 137 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 TLR4O00206 839 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 ETHE1O95571 254 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 CRISP3P54108 245 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 SEMG2Q02383 582 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 PDE7AQ13946 482 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 HIST2H2AA3Q6FI13 130 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 SERPINA13PQ6UXR4 307 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 SPATC1Q76KD6 591 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 DNAJB7Q7Z6W7 309 aaPredicted RBP13.25□□□□□ -0.29
MKS1-201ENST00000313863 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.25□□□□□ -0.29
MKS1-201ENST00000313863 RAVER1Q8IY67 606 aaKnown RBP13.25□□□□□ -0.29
MKS1-201ENST00000313863 Q8N9G6 341 aaPredicted RBP13.25□□□□□ -0.29
MKS1-201ENST00000313863 DEPDC7Q96QD5 511 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 FAM83CQ9BQN1 747 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 UCK2Q9BZX2 261 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 NDEL1Q9GZM8 345 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 SLC22A4Q9H015 551 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 FAM83DQ9H4H8 585 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 NMNAT1Q9HAN9 279 aaPredicted RBP13.25□□□□□ -0.29
MKS1-201ENST00000313863 SLC25A19Q9HC21 320 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 GPATCH2Q9NW75 528 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 B4GALT6Q9UBX8 382 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 TMPRSS11EQ9UL52 423 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 CCDC88CQ9P219 2028 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 PLXNA2O75051 1894 aa13.25□□□□□ -0.29
MKS1-201ENST00000313863 PRRG1O14668 218 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 OLFM2O95897 454 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 OSMP13725 252 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 POU2F1P14859 743 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 ZNF8P17098 575 aaPredicted RBP13.24□□□□□ -0.29
MKS1-201ENST00000313863 PCBP3P57721 371 aaKnown RBP13.24□□□□□ -0.29
MKS1-201ENST00000313863 RPS13P62277 151 aaKnown RBP13.24□□□□□ -0.29
MKS1-201ENST00000313863 SPHARQ15513 63 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 SF1Q15637 639 aaKnown RBP13.24□□□□□ -0.29
MKS1-201ENST00000313863 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.24□□□□□ -0.29
MKS1-201ENST00000313863 ERAP2Q6P179 960 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 NRARPQ7Z6K4 114 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 ARL14EPQ8N8R7 260 aaPredicted RBP13.24□□□□□ -0.29
MKS1-201ENST00000313863 DBF4BQ8NFT6 615 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms