RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 OR2AG2A6NM03 316 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 GAPDHSO14556 408 aaPredicted RBP10.69□□□□□ -0.7
PTPN7-201ENST00000309017 SCN2BO60939 215 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 DUSP11O75319 330 aaKnown RBP10.69□□□□□ -0.7
PTPN7-201ENST00000309017 GASTP01350 101 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 CLEC2LP0C7M8 214 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 HOXB9P17482 250 aaPredicted RBP10.69□□□□□ -0.7
PTPN7-201ENST00000309017 SERPINA4P29622 427 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 CSTF2P33240 577 aaKnown RBP eCLIP10.69□□□□□ -0.7
PTPN7-201ENST00000309017 ETV6P41212 452 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 NFE2L1Q14494 772 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 BTBD16Q32M84 506 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 SMUG1Q53HV7 270 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 ZNF57Q68EA5 555 aaPredicted RBP10.69□□□□□ -0.7
PTPN7-201ENST00000309017 TPGS1Q6ZTW0 290 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 CHST9Q7L1S5 443 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 CLP1Q92989 425 aaKnown RBP10.69□□□□□ -0.7
PTPN7-201ENST00000309017 DACT3Q96B18 629 aaPredicted RBP10.69□□□□□ -0.7
PTPN7-201ENST00000309017 PHF21AQ96BD5 680 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 C2orf49Q9BVC5 232 aaPredicted RBP10.69□□□□□ -0.7
PTPN7-201ENST00000309017 CDCA4Q9BXL8 241 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 BARHL1Q9BZE3 327 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 HHATLQ9HCP6 504 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 CNOT2Q9NZN8 540 aaKnown RBP10.69□□□□□ -0.7
PTPN7-201ENST00000309017 ABT1Q9ULW3 272 aaKnown RBP10.69□□□□□ -0.7
PTPN7-201ENST00000309017 GREB1Q4ZG55 1949 aa10.69□□□□□ -0.7
PTPN7-201ENST00000309017 TRAV19A0A0A6YYK7 116 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 PSPHP78330 225 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 GPR17Q13304 367 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 LARS2Q15031 903 aaKnown RBP10.68□□□□□ -0.7
PTPN7-201ENST00000309017 C5orf22Q49AR2 442 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 GGTA1PQ4G0N0 100 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 KIAA1841Q6NSI8 718 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 FAM180BQ6P0A1 224 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 LYPD8Q6UX82 237 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 SERPINA13PQ6UXR4 307 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 RFLNAQ6ZTI6 216 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 SLC24A5Q71RS6 500 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 TMPRSS11BQ86T26 416 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 THOC6Q86W42 341 aaKnown RBP10.68□□□□□ -0.7
PTPN7-201ENST00000309017 ATCAYQ86WG3 371 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 YIPF7Q8N8F6 280 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 L3MBTL4Q8NA19 623 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 PPCDCQ96CD2 204 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 MND1Q9BWT6 205 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 SRRQ9GZT4 340 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 ING3Q9NXR8 418 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 ICMTO60725 284 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 IGSF6O95976 241 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 SCG5P05408 212 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 MYL12AP19105 171 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 PBLDP30039 288 aaPredicted RBP10.68□□□□□ -0.7
PTPN7-201ENST00000309017 RPS5P46782 204 aaKnown RBP10.68□□□□□ -0.7
PTPN7-201ENST00000309017 CRYBA2P53672 197 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 PTPN5P54829 565 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 HBA1P69905 142 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 GPLD1P80108 840 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 HOXC5Q00444 222 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 BNC1Q01954 994 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 CHRNEQ04844 493 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 FCHO2Q0JRZ9 810 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 CRTC2Q53ET0 693 aaPredicted RBP10.68□□□□□ -0.7
PTPN7-201ENST00000309017 PAQR6Q6TCH4 344 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 RNF165Q6ZSG1 346 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 CHAC2Q8WUX2 184 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 SPATA9Q9BWV2 254 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 TTLL2Q9BWV7 592 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 TSSK6Q9BXA6 273 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 FAM83DQ9H4H8 585 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 ANKRA2Q9H9E1 313 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 FKBP14Q9NWM8 211 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 TRAPPC4Q9Y296 219 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 V9GYH0 126 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 PRAMEF33A0A0G2JMD5 474 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.68□□□□□ -0.7
PTPN7-201ENST00000309017 PLD2O14939 933 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 TPST2O60704 377 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 PRAMEF10O60809 474 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 PRAMEF4O60810 478 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 CSO75390 466 aaKnown RBP10.68□□□□□ -0.7
PTPN7-201ENST00000309017 CD160O95971 181 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 IGFBP1P08833 259 aaPredicted RBP10.68□□□□□ -0.7
PTPN7-201ENST00000309017 SLC2A2P11168 524 aaPredicted RBP10.68□□□□□ -0.7
PTPN7-201ENST00000309017 PSMA3P25788 255 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 RPS13P62277 151 aaKnown RBP10.68□□□□□ -0.7
PTPN7-201ENST00000309017 MGAT3Q09327 533 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 C2orf80Q0P641 193 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 IL18Q14116 193 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 ZNF79Q15937 498 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 PRAMEF9Q5VWM5 478 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 MZT2BQ6NZ67 158 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 RSPO2Q6UXX9 243 aaPredicted RBP10.68□□□□□ -0.7
PTPN7-201ENST00000309017 DPY19L3Q6ZPD9 716 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 USP50Q70EL3 339 aaPredicted RBP10.68□□□□□ -0.7
PTPN7-201ENST00000309017 ATP6V1C2Q8NEY4 427 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 OR5H6Q8NGV6 325 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 WBP2Q969T9 261 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 PLD4Q96BZ4 506 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 PTPN18Q99952 460 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 SYT17Q9BSW7 474 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms