RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 SYCE1LA8MT33 242 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 GOLGA8TH3BQL2 631 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 TLR4O00206 839 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 DFFAO00273 331 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 SOCS2O14508 198 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 STX16O14662 325 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 ARPC2O15144 300 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 ACOX3O15254 700 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 ZSCAN9O15535 394 aaPredicted RBP4.71□□□□□ -1.66
CKS1B-201ENST00000308987 KLK8O60259 260 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 ACSL4O60488 711 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 NOL3O60936 208 aaKnown RBP4.71□□□□□ -1.66
CKS1B-201ENST00000308987 SDC3O75056 442 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 KATNA1O75449 491 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 EEDO75530 441 aaKnown RBP4.71□□□□□ -1.66
CKS1B-201ENST00000308987 TIPRLO75663 272 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 CDK14O94921 469 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 PRSS23O95084 383 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 CPNE6O95741 557 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 MLYCDO95822 493 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 IL18BPO95998 194 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 PEX11BO96011 259 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 CHEK2O96017 543 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 MT-CYBP00156 380 aaPredicted RBP4.71□□□□□ -1.66
CKS1B-201ENST00000308987 LDLRP01130 860 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 DNTTP04053 509 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 FGF1P05230 155 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 HLA-DQB2P05538 268 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 ALDOCP09972 364 aaKnown RBP4.71□□□□□ -1.66
CKS1B-201ENST00000308987 CD1DP15813 335 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 POLR2EP19388 210 aaKnown RBP4.71□□□□□ -1.66
CKS1B-201ENST00000308987 HLA-DPA1P20036 260 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 TCN1P20061 433 aaPredicted RBP4.71□□□□□ -1.66
CKS1B-201ENST00000308987 ATP6V1B2P21281 511 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 MSX2P35548 267 aaPredicted RBP4.71□□□□□ -1.66
CKS1B-201ENST00000308987 CCR5P51681 352 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 C21orf59P57076 290 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 YBEYP58557 167 aaPredicted RBP4.71□□□□□ -1.66
CKS1B-201ENST00000308987 TAS2R38P59533 333 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 KRTAP10-9P60411 292 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 CXADRP78310 365 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 ADARB1P78563 741 aaKnown RBP4.71□□□□□ -1.66
CKS1B-201ENST00000308987 PLOD1Q02809 727 aaPredicted RBP4.71□□□□□ -1.66
CKS1B-201ENST00000308987 CFHR1Q03591 330 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 IL10RBQ08334 325 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 RALGDSQ12967 914 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 LCP2Q13094 533 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 TOP3AQ13472 1001 aaPredicted RBP4.71□□□□□ -1.66
CKS1B-201ENST00000308987 RCAN2Q14206 197 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 LY6DQ14210 128 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 RPS6KA2Q15349 733 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 PDCD4Q53EL6 469 aaKnown RBP4.71□□□□□ -1.66
CKS1B-201ENST00000308987 RBM48Q5RL73 367 aaKnown RBP4.71□□□□□ -1.66
CKS1B-201ENST00000308987 SLC35F1Q5T1Q4 408 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 CCNYL2Q5T2Q4 361 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 RBM20Q5T481 1227 aaKnown RBP4.71□□□□□ -1.66
CKS1B-201ENST00000308987 MARC1Q5VT66 337 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 ANKS6Q68DC2 871 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 MRM1Q6IN84 353 aaKnown RBP4.71□□□□□ -1.66
CKS1B-201ENST00000308987 KLHL35Q6PF15 583 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 Q6ZPA2 131 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 RNF165Q6ZSG1 346 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 CLVS1Q8IUQ0 354 aaPredicted RBP4.71□□□□□ -1.66
CKS1B-201ENST00000308987 MYO1HQ8N1T3 1032 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 CFAP52Q8N1V2 620 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 SFRP1Q8N474 314 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 CBR4Q8N4T8 237 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 ZNF808Q8N4W9 903 aaPredicted RBP4.71□□□□□ -1.66
CKS1B-201ENST00000308987 NKAPQ8N5F7 415 aaKnown RBP4.71□□□□□ -1.66
CKS1B-201ENST00000308987 LSM14AQ8ND56 463 aaKnown RBP4.71□□□□□ -1.66
CKS1B-201ENST00000308987 FAM156AQ8NDB6 213 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 OR52E4Q8NGH9 312 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 OR52K2Q8NGK3 314 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 OR13J1Q8NGT2 312 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 FIBINQ8TAL6 211 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 STAG3L4Q8TBR4 150 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 TWIST2Q8WVJ9 160 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 FGF11Q92914 225 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 KIAA1191Q96A73 305 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 TMEM125Q96AQ2 219 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 C12orf43Q96C57 262 aaKnown RBP4.71□□□□□ -1.66
CKS1B-201ENST00000308987 LRRC58Q96CX6 371 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 NRBF2Q96F24 287 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 SLC39A13Q96H72 371 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 C1orf159Q96HA4 380 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 CELF6Q96J87 481 aaKnown RBP4.71□□□□□ -1.66
CKS1B-201ENST00000308987 DNAJC1Q96KC8 554 aaKnown RBP4.71□□□□□ -1.66
CKS1B-201ENST00000308987 RPL10LQ96L21 214 aaKnown RBP4.71□□□□□ -1.66
CKS1B-201ENST00000308987 MARK4Q96L34 752 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 PPP1R36Q96LQ0 422 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 ZNF599Q96NL3 588 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 SERPINB11Q96P15 392 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 ATOH8Q96SQ7 321 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 C1orf50Q9BV19 199 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 NPLQ9BXD5 320 aaPredicted RBP4.71□□□□□ -1.66
CKS1B-201ENST00000308987 DERL2Q9GZP9 239 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 SEMA6AQ9H2E6 1030 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 CXorf21Q9HAI6 301 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 ASCL3Q9NQ33 180 aa4.71□□□□□ -1.66
CKS1B-201ENST00000308987 AASDHPPTQ9NRN7 309 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms