RNA–Protein interactions for RNA: ENST00000308482.13

LRRFIP1-203, Transcript of LRR binding FLII interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRRFIP1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-203ENST00000308482 FAPQ12884 760 aa13.83□□□□□ -0.19
LRRFIP1-203ENST00000308482 SCARB2Q14108 478 aa13.83□□□□□ -0.19
LRRFIP1-203ENST00000308482 CDKN3Q16667 212 aa13.83□□□□□ -0.19
LRRFIP1-203ENST00000308482 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.83□□□□□ -0.191e-7■■■■□ 25.6
LRRFIP1-203ENST00000308482 SLC35F1Q5T1Q4 408 aa13.83□□□□□ -0.19
LRRFIP1-203ENST00000308482 ZNF557Q8N988 423 aaPredicted RBP13.83□□□□□ -0.19
LRRFIP1-203ENST00000308482 FOXJ1Q92949 421 aa13.83□□□□□ -0.19
LRRFIP1-203ENST00000308482 TRIM63Q969Q1 353 aa13.83□□□□□ -0.19
LRRFIP1-203ENST00000308482 REPS1Q96D71 796 aa13.83□□□□□ -0.19
LRRFIP1-203ENST00000308482 ZIC5Q96T25 663 aa13.83□□□□□ -0.19
LRRFIP1-203ENST00000308482 SLC12A9Q9BXP2 914 aa13.83□□□□□ -0.19
LRRFIP1-203ENST00000308482 POLR2J2Q9GZM3 115 aaKnown RBP13.83□□□□□ -0.19
LRRFIP1-203ENST00000308482 SNX11Q9Y5W9 270 aa13.83□□□□□ -0.19
LRRFIP1-203ENST00000308482 MTX2O75431 263 aa13.83□□□□□ -0.2
LRRFIP1-203ENST00000308482 IDSP22304 550 aa13.83□□□□□ -0.2
LRRFIP1-203ENST00000308482 PYDC2Q56P42 97 aa13.83□□□□□ -0.2
LRRFIP1-203ENST00000308482 PDZK1Q5T2W1 519 aa13.83□□□□□ -0.2
LRRFIP1-203ENST00000308482 C22orf42Q6IC83 251 aa13.83□□□□□ -0.2
LRRFIP1-203ENST00000308482 SERPINA13PQ6UXR4 307 aa13.83□□□□□ -0.2
LRRFIP1-203ENST00000308482 OR9Q1Q8NGQ5 310 aa13.83□□□□□ -0.2
LRRFIP1-203ENST00000308482 WDFY2Q96P53 400 aa13.83□□□□□ -0.2
LRRFIP1-203ENST00000308482 TTLL2Q9BWV7 592 aa13.83□□□□□ -0.2
LRRFIP1-203ENST00000308482 MAP4K5Q9Y4K4 846 aa13.83□□□□□ -0.2
LRRFIP1-203ENST00000308482 SH3D21A4FU49 640 aa13.83□□□□□ -0.2
LRRFIP1-203ENST00000308482 SLC35F4A4IF30 521 aa13.83□□□□□ -0.2
LRRFIP1-203ENST00000308482 ALPPP05187 535 aa13.83□□□□□ -0.2
LRRFIP1-203ENST00000308482 TSPAN19P0C672 248 aa13.83□□□□□ -0.2
LRRFIP1-203ENST00000308482 MSL3P1P0C860 447 aa13.83□□□□□ -0.2
LRRFIP1-203ENST00000308482 CAV3P56539 151 aa13.83□□□□□ -0.2
LRRFIP1-203ENST00000308482 TEAD4Q15561 434 aa13.83□□□□□ -0.2
LRRFIP1-203ENST00000308482 ATP13A5Q4VNC0 1218 aa13.83□□□□□ -0.2
LRRFIP1-203ENST00000308482 CELF5Q8N6W0 485 aaKnown RBP13.83□□□□□ -0.2
LRRFIP1-203ENST00000308482 OR4M1Q8NGD0 313 aa13.83□□□□□ -0.2
LRRFIP1-203ENST00000308482 ASB11Q8WXH4 323 aa13.83□□□□□ -0.2
LRRFIP1-203ENST00000308482 SLC6A18Q96N87 628 aa13.83□□□□□ -0.2
LRRFIP1-203ENST00000308482 PKP4Q99569 1192 aa13.83□□□□□ -0.2
LRRFIP1-203ENST00000308482 SLC25A19Q9HC21 320 aa13.83□□□□□ -0.2
LRRFIP1-203ENST00000308482 MALT1Q9UDY8 824 aa13.83□□□□□ -0.2
LRRFIP1-203ENST00000308482 STUB1Q9UNE7 303 aa13.83□□□□□ -0.2
LRRFIP1-203ENST00000308482 EXO1Q9UQ84 846 aaKnown RBP13.83□□□□□ -0.2
LRRFIP1-203ENST00000308482 CLCA3PQ9Y6N3 262 aa13.83□□□□□ -0.2
LRRFIP1-203ENST00000308482 NPIPB15A6NHN6 443 aaPredicted RBP13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 NPIPB8E9PQR5 432 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 PRMT3O60678 531 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 TNFRSF21O75509 655 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 SPAM1P38567 509 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 NSG1P42857 185 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 XCR1P46094 333 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 LIMS1P48059 325 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 RHAGQ02094 409 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 TATDN3Q17R31 274 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 WDR45BQ5MNZ6 344 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 FAM180BQ6P0A1 224 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 PHC2Q8IXK0 858 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 WDR20Q8TBZ3 569 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 CREB3L4Q8TEY5 395 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 DEDD2Q8WXF8 326 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 CIDECQ96AQ7 238 aaPredicted RBP13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 PARK7Q99497 189 aaKnown RBP13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 PIP5K1AQ99755 562 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 SEC14L4Q9UDX3 406 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 RAB23Q9ULC3 237 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 NDRG2Q9UN36 371 aaKnown RBP13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 RUVBL1Q9Y265 456 aaKnown RBP13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 SCN10AQ9Y5Y9 1956 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 GNG14A0A1W2PPG7 69 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 HYKKA2RU49 373 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 TPST2O60704 377 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 TBL1XO60907 577 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 C6orf47O95873 294 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 RECKO95980 971 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 IFNA8P32881 189 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 CSTF2P33240 577 aaKnown RBP eCLIP13.82□□□□□ -0.21e-7■■■■■ 67.4
LRRFIP1-203ENST00000308482 MLLT3P42568 568 aaPredicted RBP13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 OR3A3P47888 321 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 PRIM2P49643 509 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 DOC2AQ14183 400 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 UAP1L1Q3KQV9 507 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 LRRC73Q5JTD7 316 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 SYT14Q8NB59 555 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 ATP6V1C2Q8NEY4 427 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 VPS37AQ8NEZ2 397 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 ENKURQ8TC29 256 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 ZFAND1Q8TCF1 268 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 CHTF18Q8WVB6 975 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 SAMD11Q96NU1 681 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 MAPKAP1Q9BPZ7 522 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 SLC35A5Q9BS91 424 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 UCK2Q9BZX2 261 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 PLEKHB1Q9UF11 243 aaPredicted RBP13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 BTNL2Q9UIR0 455 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 MOSPD1Q9UJG1 213 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 SLC45A1Q9Y2W3 748 aa13.82□□□□□ -0.2
LRRFIP1-203ENST00000308482 TRBV4-1A0A0J9YWV2 114 aa13.81□□□□□ -0.2
LRRFIP1-203ENST00000308482 LOC105371267A0A1B0GV96 52 aa13.81□□□□□ -0.2
LRRFIP1-203ENST00000308482 IQCMA0A1B0GVH7 501 aa13.81□□□□□ -0.2
LRRFIP1-203ENST00000308482 TLR4O00206 839 aa13.81□□□□□ -0.2
LRRFIP1-203ENST00000308482 APEX1P27695 318 aaKnown RBP13.81□□□□□ -0.2
LRRFIP1-203ENST00000308482 CSKP41240 450 aa13.81□□□□□ -0.2
LRRFIP1-203ENST00000308482 MC1RQ01726 317 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms