RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 PTGDR2Q9Y5Y4 395 aa23.15■■□□□ 1.3
HOXC9-201ENST00000303450 CCDC88CQ9P219 2028 aa23.15■■□□□ 1.3
HOXC9-201ENST00000303450 TAF4O00268 1085 aa23.14■■□□□ 1.3
HOXC9-201ENST00000303450 RGS14O43566 566 aa23.14■■□□□ 1.3
HOXC9-201ENST00000303450 DNAJB6O75190 326 aa23.14■■□□□ 1.3
HOXC9-201ENST00000303450 SKAP2O75563 359 aaPredicted RBP23.14■■□□□ 1.3
HOXC9-201ENST00000303450 LINC00032P0C843 101 aa23.14■■□□□ 1.3
HOXC9-201ENST00000303450 XCR1P46094 333 aa23.14■■□□□ 1.3
HOXC9-201ENST00000303450 NKG7Q16617 165 aa23.14■■□□□ 1.3
HOXC9-201ENST00000303450 VWA2Q5GFL6 755 aa23.14■■□□□ 1.3
HOXC9-201ENST00000303450 PAGE2Q7Z2X7 111 aa23.14■■□□□ 1.3
HOXC9-201ENST00000303450 SPACA3Q8IXA5 215 aa23.14■■□□□ 1.3
HOXC9-201ENST00000303450 METTL4Q8N3J2 472 aa23.14■■□□□ 1.3
HOXC9-201ENST00000303450 KDF1Q8NAX2 398 aaPredicted RBP23.14■■□□□ 1.3
HOXC9-201ENST00000303450 FAM76AQ8TAV0 307 aa23.14■■□□□ 1.3
HOXC9-201ENST00000303450 STT3BQ8TCJ2 826 aa23.14■■□□□ 1.3
HOXC9-201ENST00000303450 MIEF2Q96C03 454 aa23.14■■□□□ 1.3
HOXC9-201ENST00000303450 PEX11GQ96HA9 241 aa23.14■■□□□ 1.3
HOXC9-201ENST00000303450 ZNF717Q9BY31 904 aaPredicted RBP23.14■■□□□ 1.3
HOXC9-201ENST00000303450 WDR54Q9H977 334 aa23.14■■□□□ 1.3
HOXC9-201ENST00000303450 PFDN4Q9NQP4 134 aa23.14■■□□□ 1.3
HOXC9-201ENST00000303450 PNPOQ9NVS9 261 aa23.14■■□□□ 1.3
HOXC9-201ENST00000303450 IL17BQ9UHF5 180 aa23.14■■□□□ 1.3
HOXC9-201ENST00000303450 NXT1Q9UKK6 140 aaKnown RBP23.14■■□□□ 1.3
HOXC9-201ENST00000303450 PCDHGA6Q9Y5G7 932 aa23.14■■□□□ 1.3
HOXC9-201ENST00000303450 IGLV3-12A0A075B6K2 115 aa23.13■■□□□ 1.29
HOXC9-201ENST00000303450 PIP5K1BO14986 540 aa23.13■■□□□ 1.29
HOXC9-201ENST00000303450 SCELO95171 688 aa23.13■■□□□ 1.29
HOXC9-201ENST00000303450 BTKQ06187 659 aa23.13■■□□□ 1.29
HOXC9-201ENST00000303450 TBL3Q12788 808 aaKnown RBP23.13■■□□□ 1.29
HOXC9-201ENST00000303450 RUNX2Q13950 521 aa23.13■■□□□ 1.29
HOXC9-201ENST00000303450 COMMD6Q7Z4G1 85 aa23.13■■□□□ 1.29
HOXC9-201ENST00000303450 CA13Q8N1Q1 262 aa23.13■■□□□ 1.29
HOXC9-201ENST00000303450 CCNL2Q96S94 520 aaPredicted RBP23.13■■□□□ 1.29
HOXC9-201ENST00000303450 CCT7Q99832 543 aa23.13■■□□□ 1.29
HOXC9-201ENST00000303450 ACTL8Q9H568 366 aa23.13■■□□□ 1.29
HOXC9-201ENST00000303450 DDX31Q9H8H2 851 aaKnown RBP23.13■■□□□ 1.29
HOXC9-201ENST00000303450 TCFL5Q9UL49 500 aa23.13■■□□□ 1.29
HOXC9-201ENST00000303450 PTRH2Q9Y3E5 179 aaKnown RBP23.13■■□□□ 1.29
HOXC9-201ENST00000303450 TPRP12270 2363 aaKnown RBP23.13■■□□□ 1.29
HOXC9-201ENST00000303450 CELSR3Q9NYQ7 3312 aa23.13■■□□□ 1.29
HOXC9-201ENST00000303450 PSMD12O00232 456 aaPredicted RBP23.13■■□□□ 1.29
HOXC9-201ENST00000303450 CNOT3O75175 753 aaKnown RBP23.13■■□□□ 1.29
HOXC9-201ENST00000303450 EEDO75530 441 aaKnown RBP23.13■■□□□ 1.29
HOXC9-201ENST00000303450 RSL1D1O76021 490 aaKnown RBP23.13■■□□□ 1.29
HOXC9-201ENST00000303450 ZGLP1P0C6A0 271 aa23.13■■□□□ 1.29
HOXC9-201ENST00000303450 RNH1P13489 461 aaKnown RBP23.13■■□□□ 1.29
HOXC9-201ENST00000303450 RPS18P62269 152 aaKnown RBP23.13■■□□□ 1.29
HOXC9-201ENST00000303450 ACSM2AQ08AH3 577 aa23.13■■□□□ 1.29
HOXC9-201ENST00000303450 SRSF6Q13247 344 aaKnown RBP23.13■■□□□ 1.29
HOXC9-201ENST00000303450 SLAMF1Q13291 335 aa23.13■■□□□ 1.29
HOXC9-201ENST00000303450 SPIN4Q56A73 249 aa23.13■■□□□ 1.29
HOXC9-201ENST00000303450 ACSM2BQ68CK6 577 aa23.13■■□□□ 1.29
HOXC9-201ENST00000303450 CYP20A1Q6UW02 462 aa23.13■■□□□ 1.29
HOXC9-201ENST00000303450 PRSS58Q8IYP2 241 aa23.13■■□□□ 1.29
HOXC9-201ENST00000303450 ZCCHC7Q8N3Z6 543 aaKnown RBP23.13■■□□□ 1.29
HOXC9-201ENST00000303450 C1orf52Q8N6N3 182 aaKnown RBP23.13■■□□□ 1.29
HOXC9-201ENST00000303450 CHTF18Q8WVB6 975 aa23.13■■□□□ 1.29
HOXC9-201ENST00000303450 TGIF2Q9GZN2 237 aa23.13■■□□□ 1.29
HOXC9-201ENST00000303450 SOX17Q9H6I2 414 aaPredicted RBP23.13■■□□□ 1.29
HOXC9-201ENST00000303450 C14orf105Q9NVL8 296 aa23.13■■□□□ 1.29
HOXC9-201ENST00000303450 ADAM29Q9UKF5 820 aa23.13■■□□□ 1.29
HOXC9-201ENST00000303450 MRPS18BQ9Y676 258 aaKnown RBP23.13■■□□□ 1.29
HOXC9-201ENST00000303450 ARHGAP10A1A4S6 786 aa23.12■■□□□ 1.29
HOXC9-201ENST00000303450 VSTM2BA6NLU5 285 aa23.12■■□□□ 1.29
HOXC9-201ENST00000303450 KLF7O75840 302 aaPredicted RBP23.12■■□□□ 1.29
HOXC9-201ENST00000303450 BMP10O95393 424 aa23.12■■□□□ 1.29
HOXC9-201ENST00000303450 GBAP04062 536 aa23.12■■□□□ 1.29
HOXC9-201ENST00000303450 KLK1P06870 262 aa23.12■■□□□ 1.29
HOXC9-201ENST00000303450 IL10P22301 178 aa23.12■■□□□ 1.29
HOXC9-201ENST00000303450 FOLR3P41439 243 aa23.12■■□□□ 1.29
HOXC9-201ENST00000303450 LIM2P55344 173 aa23.12■■□□□ 1.29
HOXC9-201ENST00000303450 PDCD2Q16342 344 aaPredicted RBP23.12■■□□□ 1.29
HOXC9-201ENST00000303450 BROXQ5VW32 411 aa23.12■■□□□ 1.29
HOXC9-201ENST00000303450 SHISA6Q6ZSJ9 500 aa23.12■■□□□ 1.29
HOXC9-201ENST00000303450 CRLF3Q8IUI8 442 aa23.12■■□□□ 1.29
HOXC9-201ENST00000303450 ZC3H7AQ8IWR0 971 aaKnown RBP23.12■■□□□ 1.29
HOXC9-201ENST00000303450 SHISA5Q8N114 240 aa23.12■■□□□ 1.29
HOXC9-201ENST00000303450 TBC1D20Q96BZ9 403 aa23.12■■□□□ 1.29
HOXC9-201ENST00000303450 APIPQ96GX9 242 aa23.12■■□□□ 1.29
HOXC9-201ENST00000303450 OR1F2PQ96R84 312 aa23.12■■□□□ 1.29
HOXC9-201ENST00000303450 LYRM4Q9HD34 91 aa23.12■■□□□ 1.29
HOXC9-201ENST00000303450 DAPP1Q9UN19 280 aa23.12■■□□□ 1.29
HOXC9-201ENST00000303450 ACACBO00763 2458 aa23.12■■□□□ 1.29
HOXC9-201ENST00000303450 A0A0A6YYD5 115 aa23.11■■□□□ 1.29
HOXC9-201ENST00000303450 KITP10721 976 aa23.11■■□□□ 1.29
HOXC9-201ENST00000303450 FOXL2P58012 376 aa23.11■■□□□ 1.29
HOXC9-201ENST00000303450 NR6A1Q15406 480 aa23.11■■□□□ 1.29
HOXC9-201ENST00000303450 CCNYL2Q5T2Q4 361 aa23.11■■□□□ 1.29
HOXC9-201ENST00000303450 MFSD4BQ5TF39 518 aa23.11■■□□□ 1.29
HOXC9-201ENST00000303450 FAM69BQ5VUD6 431 aa23.11■■□□□ 1.29
HOXC9-201ENST00000303450 Q6ZSR9 355 aa23.11■■□□□ 1.29
HOXC9-201ENST00000303450 OR2Y1Q8NGV0 311 aa23.11■■□□□ 1.29
HOXC9-201ENST00000303450 C19orf60Q96EN9 201 aa23.11■■□□□ 1.29
HOXC9-201ENST00000303450 C7orf26Q96N11 449 aa23.11■■□□□ 1.29
HOXC9-201ENST00000303450 SPSB2Q99619 263 aa23.11■■□□□ 1.29
HOXC9-201ENST00000303450 RBCK1Q9BYM8 510 aa23.11■■□□□ 1.29
HOXC9-201ENST00000303450 MARCOQ9UEW3 520 aaPredicted RBP23.11■■□□□ 1.29
HOXC9-201ENST00000303450 FBXW2Q9UKT8 454 aa23.11■■□□□ 1.29
HOXC9-201ENST00000303450 CCL27Q9Y4X3 112 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms