RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 SLC29A2Q14542 456 aa10.55□□□□□ -0.72
CLCC1-201ENST00000302500 TERF2Q15554 542 aa10.55□□□□□ -0.72
CLCC1-201ENST00000302500 PFKFB4Q16877 469 aa10.55□□□□□ -0.72
CLCC1-201ENST00000302500 MINDY4Q4G0A6 757 aa10.55□□□□□ -0.72
CLCC1-201ENST00000302500 PAPD4Q6PIY7 484 aaKnown RBP10.55□□□□□ -0.72
CLCC1-201ENST00000302500 GOLGA7Q7Z5G4 137 aa10.55□□□□□ -0.72
CLCC1-201ENST00000302500 KIF2BQ8N4N8 673 aa10.55□□□□□ -0.72
CLCC1-201ENST00000302500 SIRT6Q8N6T7 355 aa10.55□□□□□ -0.72
CLCC1-201ENST00000302500 MDS2Q8NDY4 140 aa10.55□□□□□ -0.72
CLCC1-201ENST00000302500 OR52B6Q8NGF0 335 aa10.55□□□□□ -0.72
CLCC1-201ENST00000302500 M1APQ8TC57 530 aa10.55□□□□□ -0.72
CLCC1-201ENST00000302500 EXT2Q93063 718 aa10.55□□□□□ -0.72
CLCC1-201ENST00000302500 NSUN5Q96P11 429 aaKnown RBP10.55□□□□□ -0.72
CLCC1-201ENST00000302500 NTMT1Q9BV86 223 aa10.55□□□□□ -0.72
CLCC1-201ENST00000302500 DMRT3Q9NQL9 472 aa10.55□□□□□ -0.72
CLCC1-201ENST00000302500 PRDM9Q9NQV7 894 aa10.55□□□□□ -0.72
CLCC1-201ENST00000302500 PSD3Q9NYI0 1048 aa10.55□□□□□ -0.72
CLCC1-201ENST00000302500 EMCNQ9ULC0 261 aa10.55□□□□□ -0.72
CLCC1-201ENST00000302500 SAGE2PA6NJ88 616 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 TTLL8A6PVC2 850 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 SYCE1LA8MT33 242 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 SUPT3HB4E1H0 165 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 RTCAO00442 366 aaKnown RBP10.54□□□□□ -0.72
CLCC1-201ENST00000302500 PLPP1O14494 284 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 SUPT3HO75486 399 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 NEURL1O76050 574 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 INHBAP08476 426 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 RHOXF2BP0C7M4 288 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 RNH1P13489 461 aaKnown RBP10.54□□□□□ -0.72
CLCC1-201ENST00000302500 GNLYP22749 145 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 ATP5A1P25705 553 aaKnown RBP10.54□□□□□ -0.72
CLCC1-201ENST00000302500 BSGP35613 385 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 PIK3CBP42338 1070 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 ARFIP1P53367 373 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 RAB38P57729 211 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 STXBP1P61764 594 aaKnown RBP10.54□□□□□ -0.72
CLCC1-201ENST00000302500 BTN3A2P78410 334 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 IRF8Q02556 426 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 MRPL49Q13405 166 aaKnown RBP10.54□□□□□ -0.72
CLCC1-201ENST00000302500 LAPTM5Q13571 262 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 ZNF169Q14929 603 aaPredicted RBP10.54□□□□□ -0.72
CLCC1-201ENST00000302500 RASA2Q15283 850 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 NSDHLQ15738 373 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 GGTA1PQ4G0N0 100 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 DEPDC1Q5TB30 811 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 ZNF468Q5VIY5 522 aaPredicted RBP10.54□□□□□ -0.72
CLCC1-201ENST00000302500 LIPJQ5W064 366 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 LINC00696Q6ZRV3 163 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 CRLF3Q8IUI8 442 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 IFT20Q8IY31 132 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 IQCKQ8N0W5 287 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 LGI4Q8N135 537 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 KRT78Q8N1N4 520 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 ZADH2Q8N4Q0 377 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 CISD2Q8N5K1 135 aaKnown RBP10.54□□□□□ -0.72
CLCC1-201ENST00000302500 HUS1BQ8NHY5 278 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 UHMK1Q8TAS1 419 aaKnown RBP10.54□□□□□ -0.72
CLCC1-201ENST00000302500 ZNF483Q8TF39 744 aaPredicted RBP10.54□□□□□ -0.72
CLCC1-201ENST00000302500 PSMG3-AS1Q96PY0 264 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 SERINC2Q96SA4 455 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 RHOXF2Q9BQY4 288 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 YIPF2Q9BWQ6 316 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 PLA2G3Q9NZ20 509 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 TMEM216Q9P0N5 145 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 PTGFRNQ9P2B2 879 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 OPTCQ9UBM4 332 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 RNF11Q9Y3C5 154 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 MMACHCQ9Y4U1 282 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 PCDHGB6Q9Y5F9 930 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 NCOA6Q14686 2063 aaPredicted RBP10.54□□□□□ -0.72
CLCC1-201ENST00000302500 CROCCQ5TZA2 2017 aa10.54□□□□□ -0.72
CLCC1-201ENST00000302500 DIDO1Q9BTC0 2240 aaKnown RBP10.53□□□□□ -0.72
CLCC1-201ENST00000302500 ITPR2Q14571 2701 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 CSMD2Q7Z408 3487 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 A0A0A6YYD5 115 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 PABPN1LA6NDY0 278 aaKnown RBP10.53□□□□□ -0.72
CLCC1-201ENST00000302500 URADA6NGE7 173 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 A8MT66 165 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 FOXO6A8MYZ6 492 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 CLGNO14967 610 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 PRKNO60260 465 aaPredicted RBP10.53□□□□□ -0.72
CLCC1-201ENST00000302500 PRMT3O60678 531 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 B4GALT2O60909 372 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 SEMA7AO75326 666 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 SHBGP04278 402 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 SERPIND1P05546 499 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 ICAM2P13598 275 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 EPB42P16452 691 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 HIST1H1TP22492 207 aaPredicted RBP10.53□□□□□ -0.72
CLCC1-201ENST00000302500 JAK1P23458 1154 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 SOX18P35713 384 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 PLA2G16P53816 162 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 MTTPP55157 894 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 HSD17B7P56937 341 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 GTF2H2Q13888 395 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 TLR1Q15399 786 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 EXT1Q16394 746 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 TMEM35AQ53FP2 167 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 KHDRBS2Q5VWX1 349 aaKnown RBP10.53□□□□□ -0.72
CLCC1-201ENST00000302500 GTF2H2CQ6P1K8 395 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms