RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 F2RL3Q96RI0 385 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 TEX101Q9BY14 249 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 EXOSC4Q9NPD3 245 aaKnown RBP7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 TMEM5Q9Y2B1 443 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 SH3GLB1Q9Y371 365 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 TLCD2A6NGC4 264 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 GJB3O75712 270 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 CLPTM1O96005 669 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 CDK4P11802 303 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 SOX6P35712 828 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 MTPNP58546 118 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 ENPP2Q13822 863 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 SLC5A12Q1EHB4 618 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 TNFAIP8L3Q5GJ75 292 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 WASH2PQ6VEQ5 465 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 RNF111Q6ZNA4 994 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 PRSS58Q8IYP2 241 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 C16orf78Q8WTQ4 265 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 MIEF2Q96C03 454 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 PTGES2Q9H7Z7 377 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 WASH6PQ9NQA3 447 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 SDR39U1Q9NRG7 319 aaPredicted RBP7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 PNPLA3Q9NST1 481 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 ADAM30Q9UKF2 790 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 NXT1Q9UKK6 140 aaKnown RBP7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 OR52A4PA6NMU1 304 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 TBX10O75333 385 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 MFN2O95140 757 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 C6orf47O95873 294 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 SERPINA1P01009 418 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 ACPPP15309 386 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 GCAP28676 217 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 PKLRP30613 574 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 GSK3BP49841 420 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 OR4D2P58180 307 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 MYBPC3Q14896 1274 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 MCATQ8IVS2 390 aaKnown RBP7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 SFRP1Q8N474 314 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 OR13H1Q8NG92 308 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 OR8K5Q8NH50 307 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 RORBQ92753 470 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 MRGPRX3Q96LB0 322 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 C5orf34Q96MH7 638 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 BTBD9Q96Q07 612 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 PRRG4Q9BZD6 226 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 SLITRK2Q9H156 845 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 C15orf41Q9Y2V0 281 aa7.95□□□□□ -1.14
SNRPD1-201ENST00000300413 CHURC1-FNTBB4DL54 471 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 TARM1B6A8C7 271 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 E2F3O00716 465 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 POLR1CO15160 346 aaPredicted RBP7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 BRINP1O60477 761 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 SDC3O75056 442 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 AK4P27144 223 aaPredicted RBP7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 GABRB3P28472 473 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 HTR1EP28566 365 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 DGKQP52824 942 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 TRIM61Q5EBN2 209 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 CCDC81Q6ZN84 652 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 NUP54Q7Z3B4 507 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 TMEM234Q8WY98 164 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 NEIL2Q969S2 332 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 SLC6A18Q96N87 628 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 COL21A1Q96P44 957 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 LPAR4Q99677 370 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 SEMA6AQ9H2E6 1030 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 XKRYO14609 159 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 GADD45GO95257 159 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 AQP1P29972 269 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 RORAP35398 523 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 REEP5Q00765 189 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 DYNC1I2Q13409 638 aaKnown RBP7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 EIF4EBP2Q13542 120 aaPredicted RBP7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 FGL2Q14314 439 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 SLC2A7Q6PXP3 512 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 VANGL1Q8TAA9 524 aaPredicted RBP7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.94□□□□□ -1.143e-38■■■■■ 52.6
SNRPD1-201ENST00000300413 CCDC106Q9BWC9 280 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 KLHL25Q9H0H3 589 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 SLC35C2Q9NQQ7 365 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 WSB2Q9NYS7 404 aaPredicted RBP7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 RAB26Q9ULW5 256 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 WDR45Q9Y484 360 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 TDRD15B5MCY1 1934 aaKnown RBP7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 BTN3A3O00478 584 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 NOBOXO60393 691 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 PRAMEF2O60811 474 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 KRT33AO76009 404 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 IMPDH2P12268 514 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 IGFBP5P24593 272 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 ACSL1P33121 698 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 IDH2P48735 452 aaKnown RBP7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 ST3GAL3Q11203 375 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 LCN1P1Q5VSP4 162 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 ASTLQ6HA08 431 aaPredicted RBP7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 LETMD1Q6P1Q0 360 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 SFXN5Q8TD22 340 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 RFKQ969G6 155 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 MYEOVQ96EZ4 313 aa7.94□□□□□ -1.14
SNRPD1-201ENST00000300413 DEFB126Q9BYW3 111 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms