RNA–Protein interactions for RNA: ENST00000298564.14

TSPAN17-201, Transcript of tetraspanin 17, humanhuman

TSL 2 BASIC

Gene TSPAN17, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-201ENST00000298564 PRKCDQ05655 676 aa17.07■□□□□ 0.32
TSPAN17-201ENST00000298564 UGT8Q16880 541 aa17.07■□□□□ 0.32
TSPAN17-201ENST00000298564 FAM209AQ5JX71 171 aa17.07■□□□□ 0.32
TSPAN17-201ENST00000298564 NOXRED1Q6NXP6 359 aa17.07■□□□□ 0.32
TSPAN17-201ENST00000298564 FAHD1Q6P587 224 aa17.07■□□□□ 0.32
TSPAN17-201ENST00000298564 BRAT1Q6PJG6 821 aa17.07■□□□□ 0.32
TSPAN17-201ENST00000298564 LAX1Q8IWV1 398 aa17.07■□□□□ 0.32
TSPAN17-201ENST00000298564 C7orf34Q96L11 122 aa17.07■□□□□ 0.32
TSPAN17-201ENST00000298564 TCF25Q9BQ70 676 aa17.07■□□□□ 0.32
TSPAN17-201ENST00000298564 DUSP12Q9UNI6 340 aa17.07■□□□□ 0.32
TSPAN17-201ENST00000298564 MAN2B2Q9Y2E5 1009 aa17.07■□□□□ 0.32
TSPAN17-201ENST00000298564 KLHL20Q9Y2M5 609 aa17.07■□□□□ 0.32
TSPAN17-201ENST00000298564 LYVE1Q9Y5Y7 322 aa17.07■□□□□ 0.32
TSPAN17-201ENST00000298564 FADS2P1A8MWK0 482 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 RFXAPO00287 272 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 RGS13O14921 159 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 LRRTM2O43300 516 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 PCDH7O60245 1069 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 GPX5O75715 221 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 LINC00271P0C7V0 271 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 PRKCAP17252 672 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 VIPR1P32241 457 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 RPS19P39019 145 aaKnown RBP17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 IRF8Q02556 426 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 C10orf62Q5T681 223 aaPredicted RBP17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 ZNF517Q6ZMY9 492 aaPredicted RBP17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 NLRP8Q86W28 1048 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 NAGSQ8N159 534 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 SIX5Q8N196 739 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 KBTBD8Q8NFY9 601 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 UBASH3BQ8TF42 649 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 ASZ1Q8WWH4 475 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 TRIM43Q96BQ3 446 aaPredicted RBP17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 SLC30A2Q9BRI3 323 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 TPT1P8Q9HAU6 139 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 IMPAD1Q9NX62 359 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 ERVW-1Q9UQF0 538 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 LTBP2Q14767 1821 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 SLC16A5O15375 505 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 MOSPD3O75425 235 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 EIF2S1P05198 315 aaKnown RBP17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 HOXB9P17482 250 aaPredicted RBP17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 CD22P20273 847 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 RFX2P48378 723 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 AP1S2P56377 157 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 SPIBQ01892 262 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 SP140Q13342 867 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 PPIGQ13427 754 aaKnown RBP eCLIP17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 TBCEQ15813 527 aaPredicted RBP17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 IQCCQ4KMZ1 466 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 C1orf53Q5VUE5 145 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 ZNF852Q6ZMS4 543 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 CBLL1Q75N03 491 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 EIF3MQ7L2H7 374 aaKnown RBP17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 LILRA3Q8N6C8 439 aaPredicted RBP17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 OR10G2Q8NGC3 310 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 TESCQ96BS2 214 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 PHOX2BQ99453 314 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 MGLLQ99685 303 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 CLEC2DQ9UHP7 191 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 RPS6KA6Q9UK32 745 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 PEX16Q9Y5Y5 336 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 CFAP20Q9Y6A4 193 aaKnown RBP17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 WNT6Q9Y6F9 365 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 WASH3PC4AMC7 463 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 ARHGAP33O14559 1287 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 SUV39H1O43463 412 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 IGFBP1P08833 259 aaPredicted RBP17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 CHRNB1P11230 501 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 CYP2A6P11509 494 aaPredicted RBP17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 ZNF30P17039 623 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 PRPH2P23942 346 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 GGT2P36268 569 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 ZNF544Q6NX49 715 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 TUBA3EQ6PEY2 450 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 GLCCI1Q86VQ1 547 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 ZNF366Q8N895 744 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 DNAJB8Q8NHS0 232 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 WDR36Q8NI36 951 aaKnown RBP17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 NELL1Q92832 810 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 TMEM203Q969S6 136 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 OR2B2Q9GZK3 357 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 AP3M1Q9Y2T2 418 aa17.06■□□□□ 0.32
TSPAN17-201ENST00000298564 PCDH17O14917 1159 aa17.05■□□□□ 0.32
TSPAN17-201ENST00000298564 KPNA5O15131 536 aa17.05■□□□□ 0.32
TSPAN17-201ENST00000298564 TIMP1P01033 207 aa17.05■□□□□ 0.32
TSPAN17-201ENST00000298564 CTSLP07711 333 aa17.05■□□□□ 0.32
TSPAN17-201ENST00000298564 JUPP14923 745 aa17.05■□□□□ 0.32
TSPAN17-201ENST00000298564 TIMP2P16035 220 aa17.05■□□□□ 0.32
TSPAN17-201ENST00000298564 POLR2EP19388 210 aaKnown RBP17.05■□□□□ 0.32
TSPAN17-201ENST00000298564 MAPK1P28482 360 aa17.05■□□□□ 0.32
TSPAN17-201ENST00000298564 PREPP48147 710 aa17.05■□□□□ 0.32
TSPAN17-201ENST00000298564 ITGA1P56199 1179 aa17.05■□□□□ 0.32
TSPAN17-201ENST00000298564 DUOXA1Q1HG43 343 aa17.05■□□□□ 0.32
TSPAN17-201ENST00000298564 EXOC3L2Q2M3D2 409 aa17.05■□□□□ 0.32
TSPAN17-201ENST00000298564 CCSMST1Q4G0I0 132 aa17.05■□□□□ 0.32
TSPAN17-201ENST00000298564 XKR6Q5GH73 641 aa17.05■□□□□ 0.32
TSPAN17-201ENST00000298564 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.05■□□□□ 0.32
TSPAN17-201ENST00000298564 PLPP4Q5VZY2 271 aa17.05■□□□□ 0.32
TSPAN17-201ENST00000298564 PAMR1Q6UXH9 720 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms