RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 TOR1AIP1Q5JTV8 583 aa11.44□□□□□ -0.58
HMGB2-201ENST00000296503 MFSD4BQ5TF39 518 aa11.44□□□□□ -0.58
HMGB2-201ENST00000296503 PRAMEF9Q5VWM5 478 aa11.44□□□□□ -0.58
HMGB2-201ENST00000296503 PPP1R32Q7Z5V6 425 aa11.44□□□□□ -0.58
HMGB2-201ENST00000296503 MYLK4Q86YV6 388 aaPredicted RBP11.44□□□□□ -0.58
HMGB2-201ENST00000296503 PTGR2Q8N8N7 351 aaPredicted RBP11.44□□□□□ -0.58
HMGB2-201ENST00000296503 C9orf43Q8TAL5 461 aaPredicted RBP11.44□□□□□ -0.58
HMGB2-201ENST00000296503 ATP6V1E2Q96A05 226 aa11.44□□□□□ -0.58
HMGB2-201ENST00000296503 NACC2Q96BF6 587 aa11.44□□□□□ -0.58
HMGB2-201ENST00000296503 VPS50Q96JG6 964 aa11.44□□□□□ -0.58
HMGB2-201ENST00000296503 KLHL31Q9H511 634 aa11.44□□□□□ -0.58
HMGB2-201ENST00000296503 ZNF71Q9NQZ8 489 aaPredicted RBP11.44□□□□□ -0.58
HMGB2-201ENST00000296503 NMRK1Q9NWW6 199 aa11.44□□□□□ -0.58
HMGB2-201ENST00000296503 TUBD1Q9UJT1 453 aa11.44□□□□□ -0.58
HMGB2-201ENST00000296503 ZNF490Q9ULM2 529 aaPredicted RBP11.44□□□□□ -0.58
HMGB2-201ENST00000296503 TMCO1Q9UM00 188 aa11.44□□□□□ -0.58
HMGB2-201ENST00000296503 ATRXP46100 2492 aa11.43□□□□□ -0.58
HMGB2-201ENST00000296503 ZNF860A6NHJ4 632 aa11.43□□□□□ -0.58
HMGB2-201ENST00000296503 RDH16O75452 317 aa11.43□□□□□ -0.58
HMGB2-201ENST00000296503 SIX3O95343 332 aaPredicted RBP11.43□□□□□ -0.58
HMGB2-201ENST00000296503 B3GALT4O96024 378 aa11.43□□□□□ -0.58
HMGB2-201ENST00000296503 PYGBP11216 843 aa11.43□□□□□ -0.58
HMGB2-201ENST00000296503 KRT15P19012 456 aa11.43□□□□□ -0.58
HMGB2-201ENST00000296503 EPORP19235 508 aa11.43□□□□□ -0.58
HMGB2-201ENST00000296503 WDR4P57081 412 aaKnown RBP11.43□□□□□ -0.58
HMGB2-201ENST00000296503 STXBP1P61764 594 aaKnown RBP11.43□□□□□ -0.58
HMGB2-201ENST00000296503 GTF2H2Q13888 395 aa11.43□□□□□ -0.58
HMGB2-201ENST00000296503 KRT72Q14CN4 511 aa11.43□□□□□ -0.58
HMGB2-201ENST00000296503 PCBP2Q15366 365 aaKnown RBP eCLIP11.43□□□□□ -0.58
HMGB2-201ENST00000296503 TBCCQ15814 346 aa11.43□□□□□ -0.58
HMGB2-201ENST00000296503 FAAH2Q6GMR7 532 aa11.43□□□□□ -0.58
HMGB2-201ENST00000296503 NIPAL1Q6NVV3 410 aa11.43□□□□□ -0.58
HMGB2-201ENST00000296503 GTF2H2CQ6P1K8 395 aa11.43□□□□□ -0.58
HMGB2-201ENST00000296503 PDSS2Q86YH6 399 aa11.43□□□□□ -0.58
HMGB2-201ENST00000296503 CLEC1AQ8NC01 280 aa11.43□□□□□ -0.58
HMGB2-201ENST00000296503 UTP15Q8TED0 518 aaKnown RBP11.43□□□□□ -0.58
HMGB2-201ENST00000296503 CREB3L4Q8TEY5 395 aa11.43□□□□□ -0.58
HMGB2-201ENST00000296503 UBE2E3Q969T4 207 aa11.43□□□□□ -0.58
HMGB2-201ENST00000296503 WDR34Q96EX3 536 aa11.43□□□□□ -0.58
HMGB2-201ENST00000296503 FAR2Q96K12 515 aa11.43□□□□□ -0.58
HMGB2-201ENST00000296503 PAIP2Q9BPZ3 127 aaKnown RBP11.43□□□□□ -0.58
HMGB2-201ENST00000296503 TGIF2Q9GZN2 237 aa11.43□□□□□ -0.58
HMGB2-201ENST00000296503 SLC6A16Q9GZN6 736 aa11.43□□□□□ -0.58
HMGB2-201ENST00000296503 MRPL46Q9H2W6 279 aaKnown RBP11.43□□□□□ -0.58
HMGB2-201ENST00000296503 C14orf105Q9NVL8 296 aa11.43□□□□□ -0.58
HMGB2-201ENST00000296503 MKL2Q9ULH7 1088 aa11.43□□□□□ -0.58
HMGB2-201ENST00000296503 G3BP2Q9UN86 482 aaKnown RBP11.43□□□□□ -0.58
HMGB2-201ENST00000296503 ATMQ13315 3056 aa11.43□□□□□ -0.58
HMGB2-201ENST00000296503 MED13Q9UHV7 2174 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 A0A1W2PPM1 405 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 IDSB3KWA1 339 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 GALR3O60755 368 aaPredicted RBP11.42□□□□□ -0.58
HMGB2-201ENST00000296503 BMP10O95393 424 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 PCNAP12004 261 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 CREB1P16220 341 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 GSTM2P28161 218 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 EEF1DP29692 281 aaKnown RBP11.42□□□□□ -0.58
HMGB2-201ENST00000296503 ARL1P40616 181 aaPredicted RBP11.42□□□□□ -0.58
HMGB2-201ENST00000296503 CASP2P42575 452 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 XCR1P46094 333 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 C19orf57Q0VDD7 668 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 NFATC3Q12968 1075 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 MINDY4Q4G0A6 757 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 MED27Q6P2C8 311 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 TRABD2AQ86V40 505 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 AFAP1L2Q8N4X5 818 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 ANKRD42Q8N9B4 389 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 MGARPQ8TDB4 240 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 ACMSDQ8TDX5 336 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 PEX11GQ96HA9 241 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 BTBD10Q9BSF8 475 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 SLC25A23Q9BV35 468 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 IPPKQ9H8X2 491 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 ACTR8Q9H981 624 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 ATP13A2Q9NQ11 1180 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 TMEM216Q9P0N5 145 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 DCDC2Q9UHG0 476 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 HAO1Q9UJM8 370 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 HS3ST3B1Q9Y662 390 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 MASP2O00187 686 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 SOCS6O14544 535 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 JRKO75564 520 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 CLEC3AO75596 197 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 TGDSO95455 350 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 CD22P20273 847 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 PIK3CGP48736 1102 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 OLR1P78380 273 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 BTN3A2P78410 334 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 HYAL2Q12891 473 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 LRRC23Q53EV4 343 aaPredicted RBP11.42□□□□□ -0.58
HMGB2-201ENST00000296503 DCAF10Q5QP82 559 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 KIRREL2Q6UWL6 708 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 GOLGA7Q7Z5G4 137 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 LCA5Q86VQ0 697 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 ZC3H7AQ8IWR0 971 aaKnown RBP11.42□□□□□ -0.58
HMGB2-201ENST00000296503 ARHGAP24Q8N264 748 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 ZNF843Q8N446 348 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 OR5T3Q8NGG3 340 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 B4GALNT2Q8NHY0 566 aa11.42□□□□□ -0.58
HMGB2-201ENST00000296503 METTL21AQ8WXB1 218 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms