RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 TIFABQ6ZNK6 161 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 TTLL10Q6ZVT0 673 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 C7orf57Q8NEG2 295 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 BIRC7Q96CA5 298 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 SIGLEC10Q96LC7 697 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 BARD1Q99728 777 aaKnown RBP16.65■□□□□ 0.26
SHANK1-201ENST00000293441 A0A1B0GVI7 797 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 MAFKO60675 156 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 ENTPD6O75354 484 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 OR4D2P58180 307 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 DEFB134Q4QY38 66 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 THOC7Q6I9Y2 204 aaKnown RBP16.65■□□□□ 0.26
SHANK1-201ENST00000293441 REEP3Q6NUK4 255 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 HMGN2P46Q86SG4 172 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 RAB2BQ8WUD1 216 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 POLDIP3Q9BY77 421 aaKnown RBP16.65■□□□□ 0.26
SHANK1-201ENST00000293441 DEFB126Q9BYW3 111 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 MPC1LP0DKB6 136 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 PRKACGP22612 351 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 ABHD18Q0P651 414 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 MOAP1Q96BY2 351 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 MVB12BQ9H7P6 319 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 TMEM59LQ9UK28 342 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 OR5K4A6NMS3 321 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 TP53I11O14683 189 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 OR2B3O76000 313 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 IL3P08700 152 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 ARPC4P59998 168 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 NTHL1P78549 312 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 SLC18A2Q05940 514 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 TMEM130Q8N3G9 435 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 OSTF1Q92882 214 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 NSUN5Q96P11 429 aaKnown RBP16.65■□□□□ 0.26
SHANK1-201ENST00000293441 MAPKAP1Q9BPZ7 522 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 G6PC3Q9BUM1 346 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 VNN3Q9NY84 501 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 SH3D21A4FU49 640 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 GPR89AB7ZAQ6 455 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 CLDN25C9JDP6 229 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 CA3P07451 260 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 GPR89BP0CG08 455 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 DNAJB13P59910 316 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 SPERTQ8NA61 448 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 RBP7Q96R05 134 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 MNTQ99583 582 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 ASB6Q9NWX5 421 aa16.65■□□□□ 0.26
SHANK1-201ENST00000293441 RBMX2Q9Y388 322 aaKnown RBP16.65■□□□□ 0.26
SHANK1-201ENST00000293441 LOC100509620A0A075B734 347 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 ABLIM1O14639 778 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 ZMYND11Q15326 602 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 TMEM107Q6UX40 140 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 RNF111Q6ZNA4 994 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 ZNF227Q86WZ6 799 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 TMEM25Q86YD3 366 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 FAM86B1Q8N7N1 296 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.64■□□□□ 0.25
SHANK1-201ENST00000293441 NECTIN4Q96NY8 510 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 CCDC88AQ3V6T2 1871 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 MYH11P35749 1972 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 ZNF550Q7Z398 422 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 SLITRK4Q8IW52 837 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 KRTCAP2Q8N6L1 136 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 CSNK1A1LQ8N752 337 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 OR8H1Q8NGG4 311 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 CCDC59Q9P031 241 aaKnown RBP16.64■□□□□ 0.25
SHANK1-201ENST00000293441 ACTR3BQ9P1U1 418 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 MYH13Q9UKX3 1938 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 ZNF623O75123 536 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 OR7A10O76100 309 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 OR2B6P58173 313 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 LRP8Q14114 963 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 ZNF554Q86TJ5 538 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 CITED4Q96RK1 184 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 PKP2Q99959 881 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 VRTNQ9H8Y1 702 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 DNAJC27Q9NZQ0 273 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 PPP4R1LQ9P1A2 415 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 APOC1P02654 83 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 MRPL3P09001 348 aaKnown RBP16.64■□□□□ 0.25
SHANK1-201ENST00000293441 ZNF16P17020 682 aaPredicted RBP16.64■□□□□ 0.25
SHANK1-201ENST00000293441 GADD45AP24522 165 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 DCDC1P59894 354 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 LPAL2Q16609 132 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 GAL3ST3Q96A11 431 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 PADI2Q9Y2J8 665 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 SPARCP09486 303 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 PLCXD2Q0VAA5 305 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 TRAM2Q15035 370 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 OR1F2PQ96R84 312 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 FBRSL1Q9HCM7 1045 aaKnown RBP16.64■□□□□ 0.25
SHANK1-201ENST00000293441 BACE2Q9Y5Z0 518 aa16.64■□□□□ 0.25
SHANK1-201ENST00000293441 MYH6P13533 1939 aa16.63■□□□□ 0.25
SHANK1-201ENST00000293441 SLC16A5O15375 505 aa16.63■□□□□ 0.25
SHANK1-201ENST00000293441 SYPP08247 313 aa16.63■□□□□ 0.25
SHANK1-201ENST00000293441 NR0B1P51843 470 aaKnown RBP16.63■□□□□ 0.25
SHANK1-201ENST00000293441 SELENOVP59797 346 aa16.63■□□□□ 0.25
SHANK1-201ENST00000293441 FAM3CQ92520 227 aa16.63■□□□□ 0.25
SHANK1-201ENST00000293441 TESCQ96BS2 214 aa16.63■□□□□ 0.25
SHANK1-201ENST00000293441 DPH7Q9BTV6 452 aa16.63■□□□□ 0.25
SHANK1-201ENST00000293441 CD320Q9NPF0 282 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms