RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 LIPKQ5VXJ0 399 aa4.6□□□□□ -1.67
UBR1-201ENST00000290650 NEK5Q6P3R8 708 aa4.6□□□□□ -1.67
UBR1-201ENST00000290650 UGT2A3Q6UWM9 527 aa4.6□□□□□ -1.67
UBR1-201ENST00000290650 FAM86B1Q8N7N1 296 aa4.6□□□□□ -1.67
UBR1-201ENST00000290650 UBE2FQ969M7 185 aa4.6□□□□□ -1.67
UBR1-201ENST00000290650 ATOH8Q96SQ7 321 aa4.6□□□□□ -1.67
UBR1-201ENST00000290650 LHPPQ9H008 270 aa4.6□□□□□ -1.67
UBR1-201ENST00000290650 ANKRA2Q9H9E1 313 aa4.6□□□□□ -1.67
UBR1-201ENST00000290650 UCKL1Q9NWZ5 548 aa4.6□□□□□ -1.67
UBR1-201ENST00000290650 E2F3O00716 465 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 OR7A17O14581 309 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 SSNA1O43805 119 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 PRMT3O60678 531 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 SOCS5O75159 536 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 ALPPP05187 535 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 BMP1P13497 986 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 PSMA1P25786 263 aaKnown RBP4.59□□□□□ -1.67
UBR1-201ENST00000290650 ITGB8P26012 769 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 RFC2P35250 354 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 GPR4P46093 362 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 RXRGP48443 463 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 INHBCP55103 352 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 CSTF1Q05048 431 aaKnown RBP4.59□□□□□ -1.67
UBR1-201ENST00000290650 MGAT3Q09327 533 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 IQCCQ4KMZ1 466 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 GALNT12Q8IXK2 581 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 MMP21Q8N119 569 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 NCSTNQ92542 709 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 SLC39A13Q96H72 371 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 MYRFLQ96LU7 910 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 CITED4Q96RK1 184 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 QRSL1Q9H0R6 528 aaKnown RBP4.59□□□□□ -1.67
UBR1-201ENST00000290650 TIMMDC1Q9NPL8 285 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 TMEM181Q9P2C4 612 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 ABCG2Q9UNQ0 655 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 AP3M1Q9Y2T2 418 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 A0A1W2PQU0 124 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 MROH6A6NGR9 719 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 BMP10O95393 424 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 CSN2P05814 226 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 PPIBP23284 216 aaKnown RBP4.59□□□□□ -1.67
UBR1-201ENST00000290650 TTKP33981 857 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 EIF1AXP47813 144 aaKnown RBP4.59□□□□□ -1.67
UBR1-201ENST00000290650 GRSF1Q12849 480 aaKnown RBP eCLIP4.59□□□□□ -1.67
UBR1-201ENST00000290650 ILF3Q12906 894 aaKnown RBP eCLIP4.59□□□□□ -1.67
UBR1-201ENST00000290650 LARS2Q15031 903 aaKnown RBP4.59□□□□□ -1.67
UBR1-201ENST00000290650 TAF13Q15543 124 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 SLC36A3Q495N2 470 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 RNF111Q6ZNA4 994 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 LHFPL3Q86UP9 236 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 ZNF655Q8N720 491 aaPredicted RBP4.59□□□□□ -1.67
UBR1-201ENST00000290650 ZNF740Q8NDX6 193 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 KBTBD8Q8NFY9 601 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 NDNFQ8TB73 568 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 LINC01599Q8WXQ3 324 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 NT5C3BQ969T7 300 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 COX4I2Q96KJ9 171 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 ZSWIM3Q96MP5 696 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 TEFMQ96QE5 360 aaKnown RBP4.59□□□□□ -1.67
UBR1-201ENST00000290650 TUBB1Q9H4B7 451 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 TIGARQ9NQ88 270 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 ATXN7L1Q9ULK2 861 aaPredicted RBP4.59□□□□□ -1.67
UBR1-201ENST00000290650 MAU2Q9Y6X3 613 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 KNTC1P50748 2209 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 OR6C74A6NCV1 312 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 H3BNC9 293 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 M0R3H8 397 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 TLR4O00206 839 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 B3GALT2O43825 422 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 LCKP06239 509 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 HK3P52790 923 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 ATP6AP1Q15904 470 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 LRRC26Q2I0M4 334 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 COMMD6Q7Z4G1 85 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 NUDT13Q86X67 352 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 OR8K3Q8NH51 312 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 PROKR1Q8TCW9 393 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 GATAD2BQ8WXI9 593 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 C11orf24Q96F05 449 aaPredicted RBP4.59□□□□□ -1.67
UBR1-201ENST00000290650 SCRN2Q96FV2 425 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 ZNF419Q96HQ0 510 aaPredicted RBP4.59□□□□□ -1.67
UBR1-201ENST00000290650 CHIAQ9BZP6 476 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 SACM1LQ9NTJ5 587 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 MKLN1Q9UL63 735 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 GPR45Q9Y5Y3 372 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 URADA6NGE7 173 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 DRGXA6NNA5 263 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 FAM25EA8MYX2 175 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 MCIDASD6RGH6 385 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 FAM163BP0C2L3 166 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 PSKH1P11801 424 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 MPIP34949 423 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 IRS1P35568 1242 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 GNA13Q14344 377 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 TBC1D25Q3MII6 688 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 ERN2Q76MJ5 926 aaKnown RBP4.59□□□□□ -1.67
UBR1-201ENST00000290650 ERI1Q8IV48 349 aaKnown RBP4.59□□□□□ -1.67
UBR1-201ENST00000290650 CHERPQ8IWX8 916 aaKnown RBP4.59□□□□□ -1.67
UBR1-201ENST00000290650 MARVELD2Q8N4S9 558 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 FEVQ99581 238 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms