RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 KLHL6Q8WZ60 621 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 MOCOSQ96EN8 888 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 TPD52L3Q96J77 140 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 CNDP2Q96KP4 475 aaKnown RBP8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 KCNA7Q96RP8 456 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 HBEGFQ99075 208 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 MYLK2Q9H1R3 596 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 WBP11Q9Y2W2 641 aaKnown RBP8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 PIEZO1Q92508 2521 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 ATP6AP2A0A1C7CYW4 349 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 HAT1O14929 419 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 LSM1O15116 133 aaKnown RBP8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 ATP6AP2O75787 350 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 PGDP52209 483 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 NFYCQ13952 458 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 SLC9B1Q4ZJI4 515 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 AGKQ53H12 422 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 FIGLAQ6QHK4 219 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 CACTIN-AS1Q8N1I8 211 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 CREB3L4Q8TEY5 395 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 CYGBQ8WWM9 190 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 KIAA1143Q96AT1 154 aaPredicted RBP8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 TRAPPC9Q96Q05 1148 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 DPH7Q9BTV6 452 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 LRRN3Q9H3W5 708 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 PRDM9Q9NQV7 894 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 LYVE1Q9Y5Y7 322 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 H3BN98 237 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 CBFA2T3O75081 653 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 ERVK-8P63133 956 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 OCA2Q04671 838 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 EMX2Q04743 252 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 ADPRMQ3LIE5 342 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 PDCD4Q53EL6 469 aaKnown RBP8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 YOD1Q5VVQ6 348 aaPredicted RBP8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 PIP4P1Q86T03 277 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 SFTPA2Q8IWL1 248 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 DPP10Q8N608 796 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 OR8K5Q8NH50 307 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 EME1Q96AY2 570 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 ZFYVE21Q9BQ24 234 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 MS4A8Q9BY19 250 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 ACSS2Q9NR19 701 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 PCDHGA1Q9Y5H4 931 aa8.04□□□□□ -1.12
PTPDC1-201ENST00000288976 PEX12O00623 359 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 B4GAT1O43505 415 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 ZBTB11O95625 1053 aaPredicted RBP8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 LBPP18428 481 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 TGM1P22735 817 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 PRDX6P30041 224 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 GDI2P50395 445 aaKnown RBP8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 SQLEQ14534 574 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 TCEAL6Q6IPX3 200 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 GALNT18Q6P9A2 607 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 DNAJC22Q8N4W6 341 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 HUS1BQ8NHY5 278 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 TCEAL3Q969E4 200 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 ACPTQ9BZG2 426 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 PTPN13Q12923 2485 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 B2RBV5 119 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 C9J4A7 227 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 TMX2-CTNND1H3BSU7 103 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 PRMT3O60678 531 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 SRPX2O60687 465 aaPredicted RBP8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 IDO1P14902 403 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 BCL6P41182 706 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 NUP107P57740 925 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 OR1D5P58170 312 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 TRA2BP62995 288 aaKnown RBP8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 E2F1Q01094 437 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 RGS1Q08116 209 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 PERM1Q5SV97 790 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 GUSBP11Q6P575 273 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 BPHLQ86WA6 291 aaPredicted RBP8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 ATG16L2Q8NAA4 619 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 OR2T11Q8NH01 316 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 KAT2AQ92830 837 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 ZNF764Q96H86 408 aaPredicted RBP8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 SLC41A2Q96JW4 573 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 SEPHS2Q99611 448 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 SLC6A16Q9GZN6 736 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 CLK4Q9HAZ1 481 aaKnown RBP8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 C1orf109Q9NX04 203 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 ABCA7Q8IZY2 2146 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 FITM1A5D6W6 292 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 URADA6NGE7 173 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 SLC25A12O75746 678 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 KLK3P07288 261 aaPredicted RBP8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 THRAP10827 490 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 GABRA4P48169 554 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 PLA2G16P53816 162 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 STXBP1P61764 594 aaKnown RBP8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 HERC3Q15034 1050 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 LSM12Q3MHD2 195 aaKnown RBP8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 D2HGDHQ8N465 521 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 TMEM156Q8N614 296 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 ANKRD53Q8N9V6 530 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 CAMKVQ8NCB2 501 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 SRFBP1Q8NEF9 429 aaKnown RBP8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 STARD8Q92502 1023 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms