RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 LRRC17Q8N6Y2 441 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 TRPV1Q8NER1 839 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 GPR156Q8NFN8 814 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 MDGA1Q8NFP4 955 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 OR7D4Q8NG98 312 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 OR11H4Q8NGC9 324 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.31□□□□□ -0.44
HERC6-202ENST00000273960 SMG7Q92540 1137 aaKnown RBP12.31□□□□□ -0.44
HERC6-202ENST00000273960 PIGKQ92643 395 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 ART5Q96L15 291 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 MTERF1Q99551 399 aaKnown RBP12.31□□□□□ -0.44
HERC6-202ENST00000273960 ACSL6Q9UKU0 697 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 FZD4Q9ULV1 537 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 NEU3Q9UQ49 428 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 PCDHGB3Q9Y5G1 929 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 KLK4Q9Y5K2 254 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 MYO9BQ13459 2157 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 PRRG1O14668 218 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 ACSL4O60488 711 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 CSO75390 466 aaKnown RBP12.31□□□□□ -0.44
HERC6-202ENST00000273960 PRAMEF1O95521 474 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 CFDP00746 253 aaPredicted RBP12.31□□□□□ -0.44
HERC6-202ENST00000273960 ALPPP05187 535 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 ETV6P41212 452 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 AIF1P55008 147 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 PER3P56645 1201 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 RGS1Q08116 209 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 AANATQ16613 207 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 ATAT1Q5SQI0 421 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 MZT2BQ6NZ67 158 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 TEX261Q6UWH6 196 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 GLB1LQ6UWU2 654 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 FAM151BQ6UXP7 276 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 AGMOQ6ZNB7 445 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 ZNF367Q7RTV3 350 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 KANSL1Q7Z3B3 1105 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 THEM5Q8N1Q8 247 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 C9orf62Q8N4C0 152 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 TMEM145Q8NBT3 493 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 ASB12Q8WXK4 309 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 PSKH2Q96QS6 385 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 CLEC4MQ9H2X3 399 aaPredicted RBP12.31□□□□□ -0.44
HERC6-202ENST00000273960 SPATA6Q9NWH7 488 aaPredicted RBP12.31□□□□□ -0.44
HERC6-202ENST00000273960 ERVW-1Q9UQF0 538 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 U3KQ87 197 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 USP34Q70CQ2 3546 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 MAGEB17A8MXT2 336 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 MANBAO00462 879 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 PCDH7O60245 1069 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 RAMP2O60895 175 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 DUSP11O75319 330 aaKnown RBP12.31□□□□□ -0.44
HERC6-202ENST00000273960 ODC1P11926 461 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 KELP23276 732 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 GRK4P32298 578 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 MORN1Q5T089 497 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 BHLHA9Q7RTU4 235 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 TCEANCQ8N8B7 351 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 SOCS4Q8WXH5 440 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 GATAD2BQ8WXI9 593 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 SMARCD1Q96GM5 515 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 TMEM80Q96HE8 168 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 B3GNT2Q9NY97 397 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 ING4Q9UNL4 249 aa12.31□□□□□ -0.44
HERC6-202ENST00000273960 C2orf92A0A1B0GVN3 265 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 ORC5O43913 435 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 RFPL3O75679 317 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 PEX11BO96011 259 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 GJA1P17302 382 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 CPN2P22792 545 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 CTGFP29279 349 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 GPR15P49685 360 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 MLLT6P55198 1093 aaPredicted RBP12.3□□□□□ -0.44
HERC6-202ENST00000273960 DCDC1P59894 354 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 EXOSC2Q13868 293 aaKnown RBP12.3□□□□□ -0.44
HERC6-202ENST00000273960 PLAG1Q6DJT9 500 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 TMEM81Q6P7N7 255 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 ADGRD2Q7Z7M1 963 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 TCTE3Q8IZS6 198 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 ATAD1Q8NBU5 361 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 POLR1EQ9GZS1 481 aaKnown RBP12.3□□□□□ -0.44
HERC6-202ENST00000273960 KCNH6Q9H252 994 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 ARNT2Q9HBZ2 717 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 RAB23Q9ULC3 237 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 NUMA1Q14980 2115 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 A0A1W2PRG6 482 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 MBLAC1A4D2B0 266 aaPredicted RBP12.3□□□□□ -0.44
HERC6-202ENST00000273960 WNT9AO14904 365 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 PAHP00439 452 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 HBQ1P09105 142 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 HLA-EP13747 358 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 MAGEA2P43356 314 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 SRP9P49458 86 aaKnown RBP12.3□□□□□ -0.44
HERC6-202ENST00000273960 GZMMP51124 257 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 CLDN8P56748 225 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 PCBP1Q15365 356 aaKnown RBP eCLIP12.3□□□□□ -0.44
HERC6-202ENST00000273960 FAHD1Q6P587 224 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 XKRXQ6PP77 449 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 LINGO4Q6UY18 593 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 NAGSQ8N159 534 aa12.3□□□□□ -0.44
HERC6-202ENST00000273960 SLAIN1Q8ND83 568 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms