RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 V9GYH0 126 aa26.32■■□□□ 1.8
CBX4-201ENST00000269397 EIF3FO00303 357 aaPredicted RBP26.32■■□□□ 1.8
CBX4-201ENST00000269397 ZNF8P17098 575 aaPredicted RBP26.32■■□□□ 1.8
CBX4-201ENST00000269397 CD72P21854 359 aa26.32■■□□□ 1.8
CBX4-201ENST00000269397 CDK6Q00534 326 aa26.32■■□□□ 1.8
CBX4-201ENST00000269397 SLAMF1Q13291 335 aa26.32■■□□□ 1.8
CBX4-201ENST00000269397 ZNF79Q15937 498 aa26.32■■□□□ 1.8
CBX4-201ENST00000269397 TRIM60Q495X7 471 aa26.32■■□□□ 1.8
CBX4-201ENST00000269397 CHTF18Q8WVB6 975 aa26.32■■□□□ 1.8
CBX4-201ENST00000269397 ABCB8Q9NUT2 735 aa26.32■■□□□ 1.8
CBX4-201ENST00000269397 FTSJ1Q9UET6 329 aa26.32■■□□□ 1.8
CBX4-201ENST00000269397 YIPF1Q9Y548 306 aa26.32■■□□□ 1.8
CBX4-201ENST00000269397 FAM172BPA6NC97 362 aa26.31■■□□□ 1.8
CBX4-201ENST00000269397 CBLP22681 906 aa26.31■■□□□ 1.8
CBX4-201ENST00000269397 XCR1P46094 333 aa26.31■■□□□ 1.8
CBX4-201ENST00000269397 CRISP1P54107 249 aa26.31■■□□□ 1.8
CBX4-201ENST00000269397 C21orf58P58505 322 aa26.31■■□□□ 1.8
CBX4-201ENST00000269397 SP140Q13342 867 aa26.31■■□□□ 1.8
CBX4-201ENST00000269397 TBRG1Q3YBR2 411 aa26.31■■□□□ 1.8
CBX4-201ENST00000269397 PLEKHS1Q5SXH7 462 aa26.31■■□□□ 1.8
CBX4-201ENST00000269397 FRMPD2BQ6IN97 320 aa26.31■■□□□ 1.8
CBX4-201ENST00000269397 PCSK9Q8NBP7 692 aaKnown RBP26.31■■□□□ 1.8
CBX4-201ENST00000269397 TMCO6Q96DC7 493 aa26.31■■□□□ 1.8
CBX4-201ENST00000269397 LYSMD1Q96S90 227 aa26.31■■□□□ 1.8
CBX4-201ENST00000269397 BEX2Q9BXY8 128 aa26.31■■□□□ 1.8
CBX4-201ENST00000269397 SUV39H2Q9H5I1 410 aa26.31■■□□□ 1.8
CBX4-201ENST00000269397 RNASET2O00584 256 aaKnown RBP26.31■■□□□ 1.8
CBX4-201ENST00000269397 SLC16A8O95907 504 aa26.31■■□□□ 1.8
CBX4-201ENST00000269397 TIA1P31483 386 aaKnown RBP eCLIP26.31■■□□□ 1.82e-7■■■■■ 43.7
CBX4-201ENST00000269397 MAPK8P45983 427 aa26.31■■□□□ 1.8
CBX4-201ENST00000269397 SPINT3P49223 89 aa26.31■■□□□ 1.8
CBX4-201ENST00000269397 GRHL2Q6ISB3 625 aa26.31■■□□□ 1.8
CBX4-201ENST00000269397 TAGAPQ8N103 731 aa26.31■■□□□ 1.8
CBX4-201ENST00000269397 UBE2J2Q8N2K1 259 aa26.31■■□□□ 1.8
CBX4-201ENST00000269397 PHOX2BQ99453 314 aa26.31■■□□□ 1.8
CBX4-201ENST00000269397 STOX2Q9P2F5 926 aaPredicted RBP26.31■■□□□ 1.8
CBX4-201ENST00000269397 TRBC2A0A5B9 178 aa26.3■■□□□ 1.8
CBX4-201ENST00000269397 CENPXA8MT69 81 aa26.3■■□□□ 1.8
CBX4-201ENST00000269397 PCSK2P16519 638 aa26.3■■□□□ 1.8
CBX4-201ENST00000269397 SOAT1P35610 550 aa26.3■■□□□ 1.8
CBX4-201ENST00000269397 CHI3L1P36222 383 aaPredicted RBP26.3■■□□□ 1.8
CBX4-201ENST00000269397 DUSP7Q16829 419 aa26.3■■□□□ 1.8
CBX4-201ENST00000269397 TMPRSS11AQ6ZMR5 421 aa26.3■■□□□ 1.8
CBX4-201ENST00000269397 RAB43Q86YS6 212 aa26.3■■□□□ 1.8
CBX4-201ENST00000269397 ASCC1Q8N9N2 400 aaKnown RBP26.3■■□□□ 1.8
CBX4-201ENST00000269397 FLCNQ8NFG4 579 aa26.3■■□□□ 1.8
CBX4-201ENST00000269397 DEPDC7Q96QD5 511 aa26.3■■□□□ 1.8
CBX4-201ENST00000269397 VN1R3Q9BXE9 311 aa26.3■■□□□ 1.8
CBX4-201ENST00000269397 C1GALT1Q9NS00 363 aa26.3■■□□□ 1.8
CBX4-201ENST00000269397 THSD1Q9NS62 852 aa26.3■■□□□ 1.8
CBX4-201ENST00000269397 HELZP42694 1942 aaKnown RBP26.3■■□□□ 1.8
CBX4-201ENST00000269397 ZAR1LA6NP61 321 aa26.3■■□□□ 1.8
CBX4-201ENST00000269397 H0YIV9 168 aa26.3■■□□□ 1.8
CBX4-201ENST00000269397 ITGA2P17301 1181 aa26.3■■□□□ 1.8
CBX4-201ENST00000269397 PAQR6Q6TCH4 344 aa26.3■■□□□ 1.8
CBX4-201ENST00000269397 DNAJB7Q7Z6W7 309 aaPredicted RBP26.3■■□□□ 1.8
CBX4-201ENST00000269397 A0A075B6Q4 140 aa26.29■■□□□ 1.8
CBX4-201ENST00000269397 A0A1W2PQ09 198 aa26.29■■□□□ 1.8
CBX4-201ENST00000269397 SMIM30A4D0T7 59 aa26.29■■□□□ 1.8
CBX4-201ENST00000269397 UGDHO60701 494 aa26.29■■□□□ 1.8
CBX4-201ENST00000269397 SRCP12931 536 aa26.29■■□□□ 1.8
CBX4-201ENST00000269397 NKX3-2P78367 333 aa26.29■■□□□ 1.8
CBX4-201ENST00000269397 MPEG1Q2M385 716 aa26.29■■□□□ 1.8
CBX4-201ENST00000269397 TMPRSS11BQ86T26 416 aa26.29■■□□□ 1.8
CBX4-201ENST00000269397 GALNT12Q8IXK2 581 aa26.29■■□□□ 1.8
CBX4-201ENST00000269397 GEMIN6Q8WXD5 167 aaKnown RBP26.29■■□□□ 1.8
CBX4-201ENST00000269397 TRBV4-1A0A0J9YWV2 114 aa26.29■■□□□ 1.8
CBX4-201ENST00000269397 SLC16A5O15375 505 aa26.29■■□□□ 1.8
CBX4-201ENST00000269397 FHP07954 510 aa26.29■■□□□ 1.8
CBX4-201ENST00000269397 TCTN1Q2MV58 587 aa26.29■■□□□ 1.8
CBX4-201ENST00000269397 NLRP8Q86W28 1048 aa26.29■■□□□ 1.8
CBX4-201ENST00000269397 SLC44A2Q8IWA5 706 aaPredicted RBP26.29■■□□□ 1.8
CBX4-201ENST00000269397 OR52N2Q8NGI0 321 aa26.29■■□□□ 1.8
CBX4-201ENST00000269397 NEIL2Q969S2 332 aa26.29■■□□□ 1.8
CBX4-201ENST00000269397 TMEM246Q9BRR3 403 aa26.29■■□□□ 1.8
CBX4-201ENST00000269397 PAQR5Q9NXK6 330 aaPredicted RBP26.29■■□□□ 1.8
CBX4-201ENST00000269397 CNOT2Q9NZN8 540 aaKnown RBP26.29■■□□□ 1.8
CBX4-201ENST00000269397 NPAP1Q9NZP6 1156 aa26.29■■□□□ 1.8
CBX4-201ENST00000269397 MEIOCA2RUB1 952 aa26.28■■□□□ 1.8
CBX4-201ENST00000269397 MANSC4A6NHS7 340 aaPredicted RBP26.28■■□□□ 1.8
CBX4-201ENST00000269397 SGTAO43765 313 aa26.28■■□□□ 1.8
CBX4-201ENST00000269397 CSO75390 466 aaKnown RBP26.28■■□□□ 1.8
CBX4-201ENST00000269397 IL7P13232 177 aa26.28■■□□□ 1.8
CBX4-201ENST00000269397 PTX3P26022 381 aaPredicted RBP26.28■■□□□ 1.8
CBX4-201ENST00000269397 HNF4AP41235 474 aa26.28■■□□□ 1.8
CBX4-201ENST00000269397 LIMS1P48059 325 aa26.28■■□□□ 1.8
CBX4-201ENST00000269397 TEKQ02763 1124 aa26.28■■□□□ 1.8
CBX4-201ENST00000269397 PRSS53Q2L4Q9 553 aa26.28■■□□□ 1.8
CBX4-201ENST00000269397 CAMKMTQ7Z624 323 aa26.28■■□□□ 1.8
CBX4-201ENST00000269397 MMP21Q8N119 569 aa26.28■■□□□ 1.8
CBX4-201ENST00000269397 ASZ1Q8WWH4 475 aa26.28■■□□□ 1.8
CBX4-201ENST00000269397 MYLIPQ8WY64 445 aa26.28■■□□□ 1.8
CBX4-201ENST00000269397 C19orf43Q9BQ61 176 aa26.28■■□□□ 1.8
CBX4-201ENST00000269397 KLHL20Q9Y2M5 609 aa26.28■■□□□ 1.8
CBX4-201ENST00000269397 PCM1Q15154 2024 aa26.28■■□□□ 1.8
CBX4-201ENST00000269397 TGFB1P01137 390 aa26.28■■□□□ 1.8
CBX4-201ENST00000269397 C17orf50Q8WW18 174 aa26.28■■□□□ 1.8
CBX4-201ENST00000269397 MAPKAP1Q9BPZ7 522 aa26.28■■□□□ 1.8
CBX4-201ENST00000269397 REEP4Q9H6H4 257 aa26.28■■□□□ 1.8
CBX4-201ENST00000269397 ZNF334Q9HCZ1 680 aaPredicted RBP26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms