RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 NDUFAF4Q9P032 175 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 CLEC1BQ9P126 229 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 LYVE1Q9Y5Y7 322 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 GMEB1Q9Y692 573 aa12.34□□□□□ -0.43
CPSF6-201ENST00000266679 MBTPS2O43462 519 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 RGS10O43665 173 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 COL9A1P20849 921 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 PSMB9P28065 219 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 ALDH4A1P30038 563 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 RPL3P39023 403 aaKnown RBP12.33□□□□□ -0.44
CPSF6-201ENST00000266679 PRIM2P49643 509 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 BMXP51813 675 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 CDH12P55289 794 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 CYP4F2P78329 520 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 DPTQ07507 201 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 ADAM15Q13444 863 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 TMEM52BQ4KMG9 183 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 IFI44LQ53G44 452 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 FAM78AQ5JUQ0 283 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 ERN2Q76MJ5 926 aaKnown RBP12.33□□□□□ -0.44
CPSF6-201ENST00000266679 OXR1Q8N573 874 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 SLC15A4Q8N697 577 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 DRAXINQ8NBI3 349 aaPredicted RBP12.33□□□□□ -0.44
CPSF6-201ENST00000266679 OR52J3Q8NH60 311 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 GIPC3Q8TF64 312 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 PLEKHA8Q96JA3 519 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 ZNF514Q96K75 400 aaPredicted RBP12.33□□□□□ -0.44
CPSF6-201ENST00000266679 OR52A5Q9H2C5 316 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 DPEP2Q9H4A9 486 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 DUSP21Q9H596 190 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 TMEM184CQ9NVA4 438 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 PCDHGB3Q9Y5G1 929 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 CFAP20Q9Y6A4 193 aaKnown RBP12.33□□□□□ -0.44
CPSF6-201ENST00000266679 C17orf113A0A1B0GUU1 675 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 A0A1W2PRB8 838 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 PI15O43692 258 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 VEGFDO43915 354 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 DNAJB5O75953 348 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 VIPP01282 170 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 PIK3CBP42338 1070 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 LSM3P62310 102 aaKnown RBP12.33□□□□□ -0.44
CPSF6-201ENST00000266679 DGCR6Q14129 220 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 CTF1Q16619 201 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 C10orf62Q5T681 223 aaPredicted RBP12.33□□□□□ -0.44
CPSF6-201ENST00000266679 C16orf87Q6PH81 154 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 TMIGD1Q6UXZ0 262 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 UNC5DQ6UXZ4 953 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 AHSA2Q719I0 299 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 C11orf96Q7Z7L8 435 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 PDZD3Q86UT5 571 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 TSPYL5Q86VY4 417 aaPredicted RBP12.33□□□□□ -0.44
CPSF6-201ENST00000266679 ENTHD1Q8IYW4 607 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 OR10G2Q8NGC3 310 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 APH1BQ8WW43 257 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 GABARAPL3Q9BY60 117 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 MIEF1Q9NQG6 463 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 PCDHGB1Q9Y5G3 927 aa12.33□□□□□ -0.44
CPSF6-201ENST00000266679 PCDHGA12O60330 932 aa12.32□□□□□ -0.44
CPSF6-201ENST00000266679 DPM1O60762 260 aa12.32□□□□□ -0.44
CPSF6-201ENST00000266679 WBP4O75554 376 aaKnown RBP12.32□□□□□ -0.44
CPSF6-201ENST00000266679 KELP23276 732 aa12.32□□□□□ -0.44
CPSF6-201ENST00000266679 P2RY2P41231 377 aa12.32□□□□□ -0.44
CPSF6-201ENST00000266679 CXCR4P61073 352 aa12.32□□□□□ -0.44
CPSF6-201ENST00000266679 CDK6Q00534 326 aa12.32□□□□□ -0.44
CPSF6-201ENST00000266679 UBE3AQ05086 875 aa12.32□□□□□ -0.44
CPSF6-201ENST00000266679 ZP2Q05996 745 aa12.32□□□□□ -0.44
CPSF6-201ENST00000266679 FOXD4Q12950 439 aaPredicted RBP12.32□□□□□ -0.44
CPSF6-201ENST00000266679 SLC5A12Q1EHB4 618 aa12.32□□□□□ -0.44
CPSF6-201ENST00000266679 EXOC3L2Q2M3D2 409 aa12.32□□□□□ -0.44
CPSF6-201ENST00000266679 LCTLQ6UWM7 567 aa12.32□□□□□ -0.44
CPSF6-201ENST00000266679 HEATR4Q86WZ0 1026 aa12.32□□□□□ -0.44
CPSF6-201ENST00000266679 SLC5A8Q8N695 610 aa12.32□□□□□ -0.44
CPSF6-201ENST00000266679 ABHD11Q8NFV4 315 aa12.32□□□□□ -0.44
CPSF6-201ENST00000266679 UBE2E3Q969T4 207 aa12.32□□□□□ -0.44
CPSF6-201ENST00000266679 MSLNLQ96KJ4 702 aa12.32□□□□□ -0.44
CPSF6-201ENST00000266679 FEVQ99581 238 aa12.32□□□□□ -0.44
CPSF6-201ENST00000266679 C11orf16Q9NQ32 467 aa12.32□□□□□ -0.44
CPSF6-201ENST00000266679 TM7SF3Q9NS93 570 aa12.32□□□□□ -0.44
CPSF6-201ENST00000266679 RLIMQ9NVW2 624 aa12.32□□□□□ -0.44
CPSF6-201ENST00000266679 TAS2R9Q9NYW1 312 aa12.32□□□□□ -0.44
CPSF6-201ENST00000266679 TAAR2Q9P1P5 351 aa12.32□□□□□ -0.44
CPSF6-201ENST00000266679 SLC23A2Q9UGH3 650 aa12.32□□□□□ -0.44
CPSF6-201ENST00000266679 TAC3Q9UHF0 121 aa12.32□□□□□ -0.44
CPSF6-201ENST00000266679 CD207Q9UJ71 328 aa12.32□□□□□ -0.44
CPSF6-201ENST00000266679 GPR34Q9UPC5 381 aa12.32□□□□□ -0.44
CPSF6-201ENST00000266679 RNF6Q9Y252 685 aa12.32□□□□□ -0.44
CPSF6-201ENST00000266679 AP1M2Q9Y6Q5 423 aa12.32□□□□□ -0.44
CPSF6-201ENST00000266679 PRAMEF25A6NGN4 478 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 J3KTA2 159 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 RTCAO00442 366 aaKnown RBP12.31□□□□□ -0.44
CPSF6-201ENST00000266679 ADAMDEC1O15204 470 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 GABARAPO95166 117 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 IL12RB1P42701 662 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 RXRGP48443 463 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 CNTN1Q12860 1018 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 CYP2A13Q16696 494 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 TRIM40Q6P9F5 258 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 DCUN1D3Q8IWE4 304 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 LGI4Q8N135 537 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 KRT78Q8N1N4 520 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms