RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 PLXNB3Q9ULL4 1909 aa16.71■□□□□ 0.27
TRAM1-201ENST00000262213 MEIOCA2RUB1 952 aa16.71■□□□□ 0.27
TRAM1-201ENST00000262213 AGAP14A8MT82 685 aa16.71■□□□□ 0.27
TRAM1-201ENST00000262213 KPNA5O15131 536 aa16.71■□□□□ 0.27
TRAM1-201ENST00000262213 SOCS5O75159 536 aa16.71■□□□□ 0.27
TRAM1-201ENST00000262213 ETV6P41212 452 aa16.71■□□□□ 0.27
TRAM1-201ENST00000262213 ASMTP46597 345 aa16.71■□□□□ 0.27
TRAM1-201ENST00000262213 SLX4IPQ5VYV7 408 aa16.71■□□□□ 0.27
TRAM1-201ENST00000262213 TTC23LQ6PF05 361 aa16.71■□□□□ 0.27
TRAM1-201ENST00000262213 FLCNQ8NFG4 579 aa16.71■□□□□ 0.27
TRAM1-201ENST00000262213 UBASH3BQ8TF42 649 aa16.71■□□□□ 0.27
TRAM1-201ENST00000262213 CLP1Q92989 425 aaKnown RBP16.71■□□□□ 0.27
TRAM1-201ENST00000262213 SCRN2Q96FV2 425 aa16.71■□□□□ 0.27
TRAM1-201ENST00000262213 FYTTD1Q96QD9 318 aaKnown RBP16.71■□□□□ 0.27
TRAM1-201ENST00000262213 CDCA4Q9BXL8 241 aa16.71■□□□□ 0.27
TRAM1-201ENST00000262213 NUFIP1Q9UHK0 495 aaKnown RBP16.71■□□□□ 0.27
TRAM1-201ENST00000262213 ALPK3Q96L96 1907 aa16.71■□□□□ 0.27
TRAM1-201ENST00000262213 H3BN98 237 aa16.71■□□□□ 0.26
TRAM1-201ENST00000262213 TNFRSF21O75509 655 aa16.71■□□□□ 0.26
TRAM1-201ENST00000262213 IL7P13232 177 aa16.71■□□□□ 0.26
TRAM1-201ENST00000262213 SSTR4P31391 388 aa16.71■□□□□ 0.26
TRAM1-201ENST00000262213 PXNP49023 591 aaPredicted RBP16.71■□□□□ 0.26
TRAM1-201ENST00000262213 AP1S2P56377 157 aa16.71■□□□□ 0.26
TRAM1-201ENST00000262213 RPS26P62854 115 aaKnown RBP16.71■□□□□ 0.26
TRAM1-201ENST00000262213 MEF2AQ02078 507 aaPredicted RBP16.71■□□□□ 0.26
TRAM1-201ENST00000262213 ZNF79Q15937 498 aa16.71■□□□□ 0.26
TRAM1-201ENST00000262213 SLC5A12Q1EHB4 618 aa16.71■□□□□ 0.26
TRAM1-201ENST00000262213 RPS26P11Q5JNZ5 115 aaPredicted RBP16.71■□□□□ 0.26
TRAM1-201ENST00000262213 FRMPD2BQ6IN97 320 aa16.71■□□□□ 0.26
TRAM1-201ENST00000262213 FAM131AQ6UXB0 335 aa16.71■□□□□ 0.26
TRAM1-201ENST00000262213 TRIM48Q8IWZ4 208 aa16.71■□□□□ 0.26
TRAM1-201ENST00000262213 CELF5Q8N6W0 485 aaKnown RBP16.71■□□□□ 0.26
TRAM1-201ENST00000262213 MYLIPQ8WY64 445 aa16.71■□□□□ 0.26
TRAM1-201ENST00000262213 SPATA9Q9BWV2 254 aa16.71■□□□□ 0.26
TRAM1-201ENST00000262213 RANGRFQ9HD47 186 aaPredicted RBP16.71■□□□□ 0.26
TRAM1-201ENST00000262213 B4GALT6Q9UBX8 382 aa16.71■□□□□ 0.26
TRAM1-201ENST00000262213 V9GYH0 126 aa16.71■□□□□ 0.26
TRAM1-201ENST00000262213 NPIPB8E9PQR5 432 aa16.7■□□□□ 0.26
TRAM1-201ENST00000262213 TGFB1P01137 390 aa16.7■□□□□ 0.26
TRAM1-201ENST00000262213 PRKAR2AP13861 404 aaKnown RBP16.7■□□□□ 0.26
TRAM1-201ENST00000262213 ZNF8P17098 575 aaPredicted RBP16.7■□□□□ 0.26
TRAM1-201ENST00000262213 ITGA2P17301 1181 aa16.7■□□□□ 0.26
TRAM1-201ENST00000262213 TIA1P31483 386 aaKnown RBP eCLIP16.7■□□□□ 0.265e-9■■■■□ 24.9
TRAM1-201ENST00000262213 CYP4F8P98187 520 aa16.7■□□□□ 0.26
TRAM1-201ENST00000262213 RUNX1T1Q06455 604 aa16.7■□□□□ 0.26
TRAM1-201ENST00000262213 LIPKQ5VXJ0 399 aa16.7■□□□□ 0.26
TRAM1-201ENST00000262213 ADAMTS19Q8TE59 1207 aa16.7■□□□□ 0.26
TRAM1-201ENST00000262213 TRBV4-1A0A0J9YWV2 114 aa16.7■□□□□ 0.26
TRAM1-201ENST00000262213 CSO75390 466 aaKnown RBP16.7■□□□□ 0.26
TRAM1-201ENST00000262213 CLEC2LP0C7M8 214 aa16.7■□□□□ 0.26
TRAM1-201ENST00000262213 MPC1LP0DKB6 136 aa16.7■□□□□ 0.26
TRAM1-201ENST00000262213 CD83Q01151 205 aa16.7■□□□□ 0.26
TRAM1-201ENST00000262213 C2orf80Q0P641 193 aa16.7■□□□□ 0.26
TRAM1-201ENST00000262213 DUSP7Q16829 419 aa16.7■□□□□ 0.26
TRAM1-201ENST00000262213 SYTL3Q4VX76 610 aa16.7■□□□□ 0.26
TRAM1-201ENST00000262213 CCSAPQ6IQ19 270 aaPredicted RBP16.7■□□□□ 0.26
TRAM1-201ENST00000262213 MMP21Q8N119 569 aa16.7■□□□□ 0.26
TRAM1-201ENST00000262213 CHAC2Q8WUX2 184 aa16.7■□□□□ 0.26
TRAM1-201ENST00000262213 GEMIN6Q8WXD5 167 aaKnown RBP16.7■□□□□ 0.26
TRAM1-201ENST00000262213 OR51B5Q9H339 312 aa16.7■□□□□ 0.26
TRAM1-201ENST00000262213 SUV39H2Q9H5I1 410 aa16.7■□□□□ 0.26
TRAM1-201ENST00000262213 STOX2Q9P2F5 926 aaPredicted RBP16.7■□□□□ 0.26
TRAM1-201ENST00000262213 YIPF1Q9Y548 306 aa16.7■□□□□ 0.26
TRAM1-201ENST00000262213 TET1Q8NFU7 2136 aa16.69■□□□□ 0.26
TRAM1-201ENST00000262213 MYOFQ9NZM1 2061 aa16.69■□□□□ 0.26
TRAM1-201ENST00000262213 TLR4O00206 839 aa16.69■□□□□ 0.26
TRAM1-201ENST00000262213 CDRT1O95170 752 aa16.69■□□□□ 0.26
TRAM1-201ENST00000262213 SLC16A8O95907 504 aa16.69■□□□□ 0.26
TRAM1-201ENST00000262213 CYP17A1P05093 508 aa16.69■□□□□ 0.26
TRAM1-201ENST00000262213 SRCP12931 536 aa16.69■□□□□ 0.26
TRAM1-201ENST00000262213 CBLP22681 906 aa16.69■□□□□ 0.26
TRAM1-201ENST00000262213 XCR1P46094 333 aa16.69■□□□□ 0.26
TRAM1-201ENST00000262213 RORCP51449 518 aa16.69■□□□□ 0.26
TRAM1-201ENST00000262213 ELAVL2Q12926 359 aaKnown RBP16.69■□□□□ 0.26
TRAM1-201ENST00000262213 CDK10Q15131 360 aa16.69■□□□□ 0.26
TRAM1-201ENST00000262213 WDR48Q8TAF3 677 aa16.69■□□□□ 0.26
TRAM1-201ENST00000262213 POLR2J2Q9GZM3 115 aaKnown RBP16.69■□□□□ 0.26
TRAM1-201ENST00000262213 FTSJ1Q9UET6 329 aa16.69■□□□□ 0.26
TRAM1-201ENST00000262213 LAMA3Q16787 3333 aa16.69■□□□□ 0.26
TRAM1-201ENST00000262213 HELZP42694 1942 aaKnown RBP16.69■□□□□ 0.26
TRAM1-201ENST00000262213 ZAR1LA6NP61 321 aa16.69■□□□□ 0.26
TRAM1-201ENST00000262213 FADS2P1A8MWK0 482 aa16.69■□□□□ 0.26
TRAM1-201ENST00000262213 APOL3O95236 402 aa16.69■□□□□ 0.26
TRAM1-201ENST00000262213 ACLYP53396 1101 aa16.69■□□□□ 0.26
TRAM1-201ENST00000262213 NKX3-2P78367 333 aa16.69■□□□□ 0.26
TRAM1-201ENST00000262213 PRKCZQ05513 592 aa16.69■□□□□ 0.26
TRAM1-201ENST00000262213 SPHARQ15513 63 aa16.69■□□□□ 0.26
TRAM1-201ENST00000262213 GRHL2Q6ISB3 625 aa16.69■□□□□ 0.26
TRAM1-201ENST00000262213 KRT73Q86Y46 540 aa16.69■□□□□ 0.26
TRAM1-201ENST00000262213 CHTF18Q8WVB6 975 aa16.69■□□□□ 0.26
TRAM1-201ENST00000262213 OVCA2Q8WZ82 227 aa16.69■□□□□ 0.26
TRAM1-201ENST00000262213 C11orf24Q96F05 449 aaPredicted RBP16.69■□□□□ 0.26
TRAM1-201ENST00000262213 SNX18Q96RF0 628 aa16.69■□□□□ 0.26
TRAM1-201ENST00000262213 TAPBPLQ9BX59 468 aa16.69■□□□□ 0.26
TRAM1-201ENST00000262213 ABCB9Q9NP78 766 aa16.69■□□□□ 0.26
TRAM1-201ENST00000262213 A0A075B6Q4 140 aa16.68■□□□□ 0.26
TRAM1-201ENST00000262213 NOTOA8MTQ0 251 aa16.68■□□□□ 0.26
TRAM1-201ENST00000262213 RNASET2O00584 256 aaKnown RBP16.68■□□□□ 0.26
TRAM1-201ENST00000262213 PRRG1O14668 218 aa16.68■□□□□ 0.26
TRAM1-201ENST00000262213 LRRTM2O43300 516 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms