RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 SLC35G4P0C7Q5 338 aa12.65□□□□□ -0.38
SGCA-201ENST00000262018 EDN3P14138 238 aa12.65□□□□□ -0.38
SGCA-201ENST00000262018 LBPP18428 481 aa12.65□□□□□ -0.38
SGCA-201ENST00000262018 RPL10P27635 214 aaKnown RBP12.65□□□□□ -0.38
SGCA-201ENST00000262018 BDKRB1P46663 353 aa12.65□□□□□ -0.38
SGCA-201ENST00000262018 CAPZBP47756 277 aa12.65□□□□□ -0.38
SGCA-201ENST00000262018 KRTAP10-9P60411 292 aa12.65□□□□□ -0.38
SGCA-201ENST00000262018 ELF3P78545 371 aaPredicted RBP12.65□□□□□ -0.38
SGCA-201ENST00000262018 ACY1Q03154 408 aa12.65□□□□□ -0.38
SGCA-201ENST00000262018 GGTA1PQ4G0N0 100 aa12.65□□□□□ -0.38
SGCA-201ENST00000262018 LCN10Q6JVE6 187 aa12.65□□□□□ -0.38
SGCA-201ENST00000262018 OGFOD2Q6N063 350 aa12.65□□□□□ -0.38
SGCA-201ENST00000262018 IGFL3Q6UXB1 125 aa12.65□□□□□ -0.38
SGCA-201ENST00000262018 UNC5DQ6UXZ4 953 aa12.65□□□□□ -0.38
SGCA-201ENST00000262018 Q6ZS92 163 aa12.65□□□□□ -0.38
SGCA-201ENST00000262018 SPATA19Q7Z5L4 167 aa12.65□□□□□ -0.38
SGCA-201ENST00000262018 BPHLQ86WA6 291 aaPredicted RBP12.65□□□□□ -0.38
SGCA-201ENST00000262018 TMEM126BQ8IUX1 230 aa12.65□□□□□ -0.38
SGCA-201ENST00000262018 POU5F2Q8N7G0 328 aa12.65□□□□□ -0.38
SGCA-201ENST00000262018 RBM15BQ8NDT2 890 aaKnown RBP12.65□□□□□ -0.38
SGCA-201ENST00000262018 RP9Q8TA86 221 aaKnown RBP12.65□□□□□ -0.38
SGCA-201ENST00000262018 GRHL3Q8TE85 626 aa12.65□□□□□ -0.38
SGCA-201ENST00000262018 ITLN2Q8WWU7 325 aaPredicted RBP12.65□□□□□ -0.38
SGCA-201ENST00000262018 TM9SF4Q92544 642 aa12.65□□□□□ -0.38
SGCA-201ENST00000262018 SLC41A2Q96JW4 573 aa12.65□□□□□ -0.38
SGCA-201ENST00000262018 MARK4Q96L34 752 aa12.65□□□□□ -0.38
SGCA-201ENST00000262018 PKP4Q99569 1192 aa12.65□□□□□ -0.38
SGCA-201ENST00000262018 CADM1Q9BY67 442 aaKnown RBP12.65□□□□□ -0.38
SGCA-201ENST00000262018 DNAJC11Q9NVH1 559 aa12.65□□□□□ -0.38
SGCA-201ENST00000262018 RIC8BQ9NVN3 520 aa12.65□□□□□ -0.38
SGCA-201ENST00000262018 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.65□□□□□ -0.38
SGCA-201ENST00000262018 SCHIP1Q9P0W5 487 aaPredicted RBP12.65□□□□□ -0.38
SGCA-201ENST00000262018 STOX2Q9P2F5 926 aaPredicted RBP12.65□□□□□ -0.38
SGCA-201ENST00000262018 PTGDR2Q9Y5Y4 395 aa12.65□□□□□ -0.38
SGCA-201ENST00000262018 CLDN9O95484 217 aa12.64□□□□□ -0.39
SGCA-201ENST00000262018 ALDOCP09972 364 aaKnown RBP12.64□□□□□ -0.39
SGCA-201ENST00000262018 XRCC1P18887 633 aaPredicted RBP12.64□□□□□ -0.39
SGCA-201ENST00000262018 HMOX2P30519 316 aa12.64□□□□□ -0.39
SGCA-201ENST00000262018 SSTR2P30874 369 aa12.64□□□□□ -0.39
SGCA-201ENST00000262018 HNRNPH1P31943 449 aaKnown RBP12.64□□□□□ -0.39
SGCA-201ENST00000262018 CPOXP36551 454 aa12.64□□□□□ -0.39
SGCA-201ENST00000262018 ARL1P40616 181 aaPredicted RBP12.64□□□□□ -0.39
SGCA-201ENST00000262018 SLC19A1P41440 591 aa12.64□□□□□ -0.39
SGCA-201ENST00000262018 MRPL19P49406 292 aaKnown RBP12.64□□□□□ -0.39
SGCA-201ENST00000262018 ARL4DP49703 201 aa12.64□□□□□ -0.39
SGCA-201ENST00000262018 GRB7Q14451 532 aa12.64□□□□□ -0.39
SGCA-201ENST00000262018 MYBPC3Q14896 1274 aa12.64□□□□□ -0.39
SGCA-201ENST00000262018 ZNF630Q2M218 657 aaPredicted RBP12.64□□□□□ -0.39
SGCA-201ENST00000262018 CCSMST1Q4G0I0 132 aa12.64□□□□□ -0.39
SGCA-201ENST00000262018 DNAL1Q4LDG9 190 aa12.64□□□□□ -0.39
SGCA-201ENST00000262018 TCHHL1Q5QJ38 904 aaPredicted RBP12.64□□□□□ -0.39
SGCA-201ENST00000262018 AGTRAPQ6RW13 159 aa12.64□□□□□ -0.39
SGCA-201ENST00000262018 BNC2Q6ZN30 1099 aaPredicted RBP12.64□□□□□ -0.39
SGCA-201ENST00000262018 SNX31Q8N9S9 440 aa12.64□□□□□ -0.39
SGCA-201ENST00000262018 L3MBTL4Q8NA19 623 aa12.64□□□□□ -0.39
SGCA-201ENST00000262018 OR56A3Q8NH54 315 aa12.64□□□□□ -0.39
SGCA-201ENST00000262018 TUBGCP3Q96CW5 907 aa12.64□□□□□ -0.39
SGCA-201ENST00000262018 MAGEB10Q96LZ2 347 aaPredicted RBP12.64□□□□□ -0.39
SGCA-201ENST00000262018 PSMD13Q9UNM6 376 aa12.64□□□□□ -0.39
SGCA-201ENST00000262018 RNF11Q9Y3C5 154 aa12.64□□□□□ -0.39
SGCA-201ENST00000262018 MYO7BQ6PIF6 2116 aa12.64□□□□□ -0.39
SGCA-201ENST00000262018 KCNE1BA0A087WTH5 132 aa12.63□□□□□ -0.39
SGCA-201ENST00000262018 KRT87PA6NCN2 255 aa12.63□□□□□ -0.39
SGCA-201ENST00000262018 CCND1P24385 295 aa12.63□□□□□ -0.39
SGCA-201ENST00000262018 IMPA1P29218 277 aa12.63□□□□□ -0.39
SGCA-201ENST00000262018 OTX2P32243 289 aa12.63□□□□□ -0.39
SGCA-201ENST00000262018 HTR6P50406 440 aa12.63□□□□□ -0.39
SGCA-201ENST00000262018 PPP1CAP62136 330 aa12.63□□□□□ -0.39
SGCA-201ENST00000262018 PCDH1Q08174 1060 aa12.63□□□□□ -0.39
SGCA-201ENST00000262018 CYLC2Q14093 348 aaPredicted RBP12.63□□□□□ -0.39
SGCA-201ENST00000262018 WASHC2DQ5SRD0 308 aa12.63□□□□□ -0.39
SGCA-201ENST00000262018 Q6ZSR9 355 aa12.63□□□□□ -0.39
SGCA-201ENST00000262018 PACS2Q86VP3 889 aa12.63□□□□□ -0.39
SGCA-201ENST00000262018 SNX32Q86XE0 403 aa12.63□□□□□ -0.39
SGCA-201ENST00000262018 RAB43Q86YS6 212 aa12.63□□□□□ -0.39
SGCA-201ENST00000262018 SLC38A9Q8NBW4 561 aa12.63□□□□□ -0.39
SGCA-201ENST00000262018 OR9A1PQ8NGU1 263 aa12.63□□□□□ -0.39
SGCA-201ENST00000262018 OR2T11Q8NH01 316 aa12.63□□□□□ -0.39
SGCA-201ENST00000262018 FBXO27Q8NI29 283 aa12.63□□□□□ -0.39
SGCA-201ENST00000262018 HMGCLL1Q8TB92 370 aa12.63□□□□□ -0.39
SGCA-201ENST00000262018 TRAPPC9Q96Q05 1148 aa12.63□□□□□ -0.39
SGCA-201ENST00000262018 NLNQ9BYT8 704 aa12.63□□□□□ -0.39
SGCA-201ENST00000262018 ATG10Q9H0Y0 220 aa12.63□□□□□ -0.39
SGCA-201ENST00000262018 ZNF552Q9H707 407 aaPredicted RBP12.63□□□□□ -0.39
SGCA-201ENST00000262018 ZBTB20Q9HC78 741 aaPredicted RBP12.63□□□□□ -0.39
SGCA-201ENST00000262018 POT1Q9NUX5 634 aa12.63□□□□□ -0.39
SGCA-201ENST00000262018 ZNF624Q9P2J8 865 aaPredicted RBP12.63□□□□□ -0.39
SGCA-201ENST00000262018 EPHA6Q9UF33 1036 aa12.63□□□□□ -0.39
SGCA-201ENST00000262018 SLC22A14Q9Y267 594 aa12.63□□□□□ -0.39
SGCA-201ENST00000262018 WDR37Q9Y2I8 494 aa12.63□□□□□ -0.39
SGCA-201ENST00000262018 LOC100653049A0A140TA62 436 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 OR52A4PA6NMU1 304 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 PSMD12O00232 456 aaPredicted RBP12.62□□□□□ -0.39
SGCA-201ENST00000262018 MEN1O00255 615 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 IFRD1O00458 451 aaPredicted RBP12.62□□□□□ -0.39
SGCA-201ENST00000262018 MANBAO00462 879 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 UGDHO60701 494 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 KRT34O76011 436 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 SLC16A8O95907 504 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 EZRP15311 586 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms