RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 ARGFXA6NJG6 315 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 CPSF4LA6NMK7 179 aaKnown RBP10.28□□□□□ -0.76
KPNA3-201ENST00000261667 D6RAR5 112 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 ITGA10O75578 1167 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 CELP19835 753 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 NFYAP23511 347 aaPredicted RBP10.28□□□□□ -0.76
KPNA3-201ENST00000261667 HLA-DMAP28067 261 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 NUMBP49757 651 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 CLCN4P51793 760 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 TTLL4Q14679 1199 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 ZNF124Q15973 351 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 IFI44LQ53G44 452 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 ATG9BQ674R7 924 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 C11orf65Q8NCR3 313 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 OR52H1Q8NGJ2 320 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 RFKQ969G6 155 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 SLC30A3Q99726 388 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 GAREM1Q9H706 876 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 POLMQ9NP87 494 aaPredicted RBP10.28□□□□□ -0.76
KPNA3-201ENST00000261667 CFAP97Q9P2B7 532 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 DYRK1BQ9Y463 629 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 AP1M2Q9Y6Q5 423 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 BRINP1O60477 761 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 BEST1O76090 585 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 JUNP05412 331 aaKnown RBP10.28□□□□□ -0.76
KPNA3-201ENST00000261667 PPP3CBP16298 524 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 BMP7P18075 431 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 C21orf33P30042 268 aaPredicted RBP10.28□□□□□ -0.76
KPNA3-201ENST00000261667 ADH7P40394 386 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 AKR1C2P52895 323 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 AKR1C1Q04828 323 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 BAMBIQ13145 260 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 AQP6Q13520 282 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 YIF1BQ5BJH7 314 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 PDZD11Q5EBL8 140 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 CLLU1Q5K131 121 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 CELF3Q5SZQ8 465 aaKnown RBP10.28□□□□□ -0.76
KPNA3-201ENST00000261667 RPS27LQ71UM5 84 aaKnown RBP10.28□□□□□ -0.76
KPNA3-201ENST00000261667 WDR53Q7Z5U6 358 aaPredicted RBP10.28□□□□□ -0.76
KPNA3-201ENST00000261667 NKAPQ8N5F7 415 aaKnown RBP10.28□□□□□ -0.76
KPNA3-201ENST00000261667 MINDY1Q8N5J2 469 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 C10orf53Q8N6V4 93 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 OR1J4Q8NGS1 313 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 MEGF10Q96KG7 1140 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 NTMT1Q9BV86 223 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 TCEAL2Q9H3H9 227 aaPredicted RBP10.28□□□□□ -0.76
KPNA3-201ENST00000261667 TSPAN16Q9UKR8 245 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 MYH2Q9UKX2 1941 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 MAGEB4O15481 346 aaPredicted RBP10.28□□□□□ -0.76
KPNA3-201ENST00000261667 ALDOAP04075 364 aaKnown RBP10.28□□□□□ -0.76
KPNA3-201ENST00000261667 SMIM6P0DI80 62 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 DARSP14868 501 aaKnown RBP10.28□□□□□ -0.76
KPNA3-201ENST00000261667 PPIBP23284 216 aaKnown RBP10.28□□□□□ -0.76
KPNA3-201ENST00000261667 HTR1EP28566 365 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 BMPR1AP36894 532 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 ALDH3B1P43353 468 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 CDH8P55286 799 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 FKBP1AP62942 108 aaKnown RBP10.28□□□□□ -0.76
KPNA3-201ENST00000261667 PTCHD3Q3KNS1 767 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 RAET1GQ6H3X3 334 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 TANGO2Q6ICL3 276 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 PIGZQ86VD9 579 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 TMC8Q8IU68 726 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 ZDHHC14Q8IZN3 488 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 OR2A12Q8NGT7 310 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 TM9SF4Q92544 642 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 TANKQ92844 425 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 SLX1AQ9BQ83 275 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 MRIQ9BWK5 157 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 CPA4Q9UI42 421 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 CRLS1Q9UJA2 301 aa10.28□□□□□ -0.76
KPNA3-201ENST00000261667 C2orf92A0A1B0GVN3 265 aa10.27□□□□□ -0.76
KPNA3-201ENST00000261667 PHOX2AO14813 284 aa10.27□□□□□ -0.76
KPNA3-201ENST00000261667 ST8SIA5O15466 376 aa10.27□□□□□ -0.76
KPNA3-201ENST00000261667 UROSP10746 265 aa10.27□□□□□ -0.76
KPNA3-201ENST00000261667 NME1P15531 152 aaKnown RBP10.27□□□□□ -0.76
KPNA3-201ENST00000261667 GIFP27352 417 aa10.27□□□□□ -0.76
KPNA3-201ENST00000261667 ZNF616Q08AN1 781 aa10.27□□□□□ -0.76
KPNA3-201ENST00000261667 TMEM132DQ14C87 1099 aa10.27□□□□□ -0.76
KPNA3-201ENST00000261667 ATAT1Q5SQI0 421 aa10.27□□□□□ -0.76
KPNA3-201ENST00000261667 NXNL2Q5VZ03 156 aa10.27□□□□□ -0.76
KPNA3-201ENST00000261667 KCTD9Q7L273 389 aa10.27□□□□□ -0.76
KPNA3-201ENST00000261667 KLHL36Q8N4N3 616 aa10.27□□□□□ -0.76
KPNA3-201ENST00000261667 SCARB1Q8WTV0 552 aa10.27□□□□□ -0.76
KPNA3-201ENST00000261667 ZDHHC15Q96MV8 337 aa10.27□□□□□ -0.76
KPNA3-201ENST00000261667 GBA2Q9HCG7 927 aaPredicted RBP10.27□□□□□ -0.76
KPNA3-201ENST00000261667 ZNF302Q9NR11 478 aa10.27□□□□□ -0.76
KPNA3-201ENST00000261667 TMEM39AQ9NV64 488 aa10.27□□□□□ -0.76
KPNA3-201ENST00000261667 PCDHGA9Q9Y5G4 932 aaKnown RBP10.27□□□□□ -0.76
KPNA3-201ENST00000261667 PLIN4Q96Q06 1357 aa10.27□□□□□ -0.77
KPNA3-201ENST00000261667 ADAMTSL1Q8N6G6 1762 aa10.27□□□□□ -0.77
KPNA3-201ENST00000261667 TMEM72A0PK05 275 aa10.27□□□□□ -0.77
KPNA3-201ENST00000261667 CPED1A4D0V7 1026 aa10.27□□□□□ -0.77
KPNA3-201ENST00000261667 TRIM77I1YAP6 450 aa10.27□□□□□ -0.77
KPNA3-201ENST00000261667 UCHL1P09936 223 aa10.27□□□□□ -0.77
KPNA3-201ENST00000261667 EPHA5P54756 1037 aa10.27□□□□□ -0.77
KPNA3-201ENST00000261667 E2F1Q01094 437 aa10.27□□□□□ -0.77
KPNA3-201ENST00000261667 SP2Q02086 613 aa10.27□□□□□ -0.77
KPNA3-201ENST00000261667 NFATC4Q14934 902 aa10.27□□□□□ -0.77
KPNA3-201ENST00000261667 SIX1Q15475 284 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms