RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 SCML2Q9UQR0 700 aa15.6■□□□□ 0.09
SREBF1-201ENST00000261646 PTGESO14684 152 aa15.6■□□□□ 0.09
SREBF1-201ENST00000261646 CAPN5O15484 640 aaPredicted RBP15.6■□□□□ 0.09
SREBF1-201ENST00000261646 ELFN1P0C7U0 828 aa15.6■□□□□ 0.09
SREBF1-201ENST00000261646 RAB8AP61006 207 aa15.6■□□□□ 0.09
SREBF1-201ENST00000261646 TCEA2Q15560 299 aa15.6■□□□□ 0.09
SREBF1-201ENST00000261646 LRIT3Q3SXY7 679 aa15.6■□□□□ 0.09
SREBF1-201ENST00000261646 SOCS4Q8WXH5 440 aa15.6■□□□□ 0.09
SREBF1-201ENST00000261646 ARNT2Q9HBZ2 717 aa15.6■□□□□ 0.09
SREBF1-201ENST00000261646 RABL2BQ9UNT1 228 aa15.6■□□□□ 0.09
SREBF1-201ENST00000261646 ERVW-1Q9UQF0 538 aa15.6■□□□□ 0.09
SREBF1-201ENST00000261646 OARD1Q9Y530 152 aa15.6■□□□□ 0.09
SREBF1-201ENST00000261646 C2orf92A0A1B0GVN3 265 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 REM1O75628 298 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 GKP32189 559 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 AVPR1BP47901 424 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 BTG3Q14201 252 aaPredicted RBP15.59■□□□□ 0.09
SREBF1-201ENST00000261646 CDK10Q15131 360 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 CATSPEREQ5SY80 951 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 SPRYD7Q5W111 196 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 REEP3Q6NUK4 255 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 PAMR1Q6UXH9 720 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 RBM23Q86U06 439 aaKnown RBP15.59■□□□□ 0.09
SREBF1-201ENST00000261646 KIF18BQ86Y91 864 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 SCRN2Q96FV2 425 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 SLC35G5Q96KT7 338 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 SMIM14Q96QK8 99 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 AIF1LQ9BQI0 150 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 STON1Q9Y6Q2 735 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 SLC9A3R1O14745 358 aaPredicted RBP15.59■□□□□ 0.09
SREBF1-201ENST00000261646 GPR39O43194 453 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 HCN1O60741 890 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 VLDLRP98155 873 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 SPIN4Q56A73 249 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 PRSS55Q6UWB4 352 aaPredicted RBP15.59■□□□□ 0.09
SREBF1-201ENST00000261646 LINC00299Q6ZSB3 139 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 IQCHQ86VS3 1027 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 SRFBP1Q8NEF9 429 aaKnown RBP15.59■□□□□ 0.09
SREBF1-201ENST00000261646 COQ8AQ8NI60 647 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 C1orf216Q8TAB5 229 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 SYT17Q9BSW7 474 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 TAS2R16Q9NYV7 291 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 KIAA1522Q9P206 1035 aaPredicted RBP15.59■□□□□ 0.09
SREBF1-201ENST00000261646 SOCS7O14512 581 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 SLC16A6O15403 523 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 NUPL2O15504 423 aaKnown RBP15.59■□□□□ 0.09
SREBF1-201ENST00000261646 PTHP01270 115 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 LAMP2P13473 410 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 TGFBR2P37173 567 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 CCR4P51679 360 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 MLLT1Q03111 559 aaPredicted RBP15.59■□□□□ 0.09
SREBF1-201ENST00000261646 EIF4HQ15056 248 aaKnown RBP15.59■□□□□ 0.09
SREBF1-201ENST00000261646 PCBP2Q15366 365 aaKnown RBP eCLIP15.59■□□□□ 0.091e-7■■■■□ 22.7
SREBF1-201ENST00000261646 PLAG1Q6DJT9 500 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 GTF2IRD2BQ6EKJ0 949 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 AGTRAPQ6RW13 159 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 TMEM207Q6UWW9 146 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 GDPD3Q7L5L3 318 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 METTL3Q86U44 580 aaKnown RBP15.59■□□□□ 0.09
SREBF1-201ENST00000261646 GTF2IRD2Q86UP8 949 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 NAGSQ8N159 534 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 SIMC1Q8NDZ2 872 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 UPF1Q92900 1129 aaKnown RBP eCLIP15.59■□□□□ 0.091e-9■■■■□ 19.9
SREBF1-201ENST00000261646 BOCQ9BWV1 1114 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 FOLH1BQ9HBA9 442 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 C3orf14Q9HBI5 128 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 BRD7Q9NPI1 651 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 NUP50Q9UKX7 468 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 DLGAP4Q9Y2H0 992 aa15.59■□□□□ 0.09
SREBF1-201ENST00000261646 NUP214P35658 2090 aaPredicted RBP15.59■□□□□ 0.09
SREBF1-201ENST00000261646 PITPNAQ00169 270 aa15.58■□□□□ 0.09
SREBF1-201ENST00000261646 NFATC2Q13469 925 aa15.58■□□□□ 0.09
SREBF1-201ENST00000261646 NTRK2Q16620 822 aa15.58■□□□□ 0.09
SREBF1-201ENST00000261646 CARD16Q5EG05 197 aa15.58■□□□□ 0.09
SREBF1-201ENST00000261646 OLFML2AQ68BL7 652 aa15.58■□□□□ 0.09
SREBF1-201ENST00000261646 TMEM220Q6QAJ8 160 aa15.58■□□□□ 0.09
SREBF1-201ENST00000261646 VASH1Q7L8A9 365 aaPredicted RBP15.58■□□□□ 0.09
SREBF1-201ENST00000261646 ZNF438Q7Z4V0 828 aa15.58■□□□□ 0.09
SREBF1-201ENST00000261646 ZBED6CLQ96FA7 236 aaPredicted RBP15.58■□□□□ 0.09
SREBF1-201ENST00000261646 A0A0G2JPF8 293 aa15.58■□□□□ 0.08
SREBF1-201ENST00000261646 MANSC4A6NHS7 340 aaPredicted RBP15.58■□□□□ 0.08
SREBF1-201ENST00000261646 HNRNPCL3B7ZW38 293 aa15.58■□□□□ 0.08
SREBF1-201ENST00000261646 MEN1O00255 615 aa15.58■□□□□ 0.08
SREBF1-201ENST00000261646 GPR32O75388 356 aa15.58■□□□□ 0.08
SREBF1-201ENST00000261646 HNRNPCL4P0DMR1 293 aa15.58■□□□□ 0.08
SREBF1-201ENST00000261646 MNDAP41218 407 aa15.58■□□□□ 0.08
SREBF1-201ENST00000261646 CSKP41240 450 aa15.58■□□□□ 0.08
SREBF1-201ENST00000261646 SLC35A2P78381 396 aa15.58■□□□□ 0.08
SREBF1-201ENST00000261646 NCEH1Q6PIU2 408 aa15.58■□□□□ 0.08
SREBF1-201ENST00000261646 PLCZ1Q86YW0 608 aa15.58■□□□□ 0.08
SREBF1-201ENST00000261646 AKIP1Q9NQ31 210 aa15.58■□□□□ 0.08
SREBF1-201ENST00000261646 FBXO8Q9NRD0 319 aa15.58■□□□□ 0.08
SREBF1-201ENST00000261646 TMEM45AQ9NWC5 275 aa15.58■□□□□ 0.08
SREBF1-201ENST00000261646 ZNF69Q9UC07 566 aa15.58■□□□□ 0.08
SREBF1-201ENST00000261646 ANKRD28O15084 1053 aa15.58■□□□□ 0.08
SREBF1-201ENST00000261646 PRMT3O60678 531 aa15.58■□□□□ 0.08
SREBF1-201ENST00000261646 ADORA3P0DMS8 318 aa15.58■□□□□ 0.08
SREBF1-201ENST00000261646 PTNP21246 168 aa15.58■□□□□ 0.08
SREBF1-201ENST00000261646 ADRA1AP35348 466 aa15.58■□□□□ 0.08
SREBF1-201ENST00000261646 CRISP3P54108 245 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms