RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 CCKBRP32239 447 aa18.2■□□□□ 0.5
SBDS-201ENST00000246868 C21orf58P58505 322 aa18.2■□□□□ 0.5
SBDS-201ENST00000246868 FOXM1Q08050 763 aa18.2■□□□□ 0.5
SBDS-201ENST00000246868 C2orf80Q0P641 193 aa18.2■□□□□ 0.5
SBDS-201ENST00000246868 YTHDF3Q7Z739 585 aaKnown RBP18.2■□□□□ 0.5
SBDS-201ENST00000246868 DEFB124Q8NES8 71 aa18.2■□□□□ 0.5
SBDS-201ENST00000246868 TESCQ96BS2 214 aa18.2■□□□□ 0.5
SBDS-201ENST00000246868 SPDL1Q96EA4 605 aa18.2■□□□□ 0.5
SBDS-201ENST00000246868 NDC1Q9BTX1 674 aa18.2■□□□□ 0.5
SBDS-201ENST00000246868 STRADBQ9C0K7 418 aa18.2■□□□□ 0.5
SBDS-201ENST00000246868 MIEF1Q9NQG6 463 aa18.2■□□□□ 0.5
SBDS-201ENST00000246868 RARRES3Q9UL19 164 aa18.2■□□□□ 0.5
SBDS-201ENST00000246868 MRPS2Q9Y399 296 aaKnown RBP18.2■□□□□ 0.5
SBDS-201ENST00000246868 NAALAD2Q9Y3Q0 740 aa18.2■□□□□ 0.5
SBDS-201ENST00000246868 ADAMTS20P59510 1910 aa18.2■□□□□ 0.5
SBDS-201ENST00000246868 CCDC154A6NI56 674 aa18.2■□□□□ 0.5
SBDS-201ENST00000246868 BBIP1A8MTZ0 92 aa18.2■□□□□ 0.5
SBDS-201ENST00000246868 C9JVG2 144 aa18.2■□□□□ 0.5
SBDS-201ENST00000246868 ANGPT2O15123 496 aa18.2■□□□□ 0.5
SBDS-201ENST00000246868 GALR3O60755 368 aaPredicted RBP18.2■□□□□ 0.5
SBDS-201ENST00000246868 HNRNPCL1O60812 293 aaKnown RBP18.2■□□□□ 0.5
SBDS-201ENST00000246868 KLHL18O94889 574 aa18.2■□□□□ 0.5
SBDS-201ENST00000246868 B3GALT4O96024 378 aa18.2■□□□□ 0.5
SBDS-201ENST00000246868 IL3P08700 152 aa18.2■□□□□ 0.5
SBDS-201ENST00000246868 COX7A2P14406 83 aa18.2■□□□□ 0.5
SBDS-201ENST00000246868 ARSFP54793 590 aa18.2■□□□□ 0.5
SBDS-201ENST00000246868 SRSF11Q05519 484 aaKnown RBP18.2■□□□□ 0.5
SBDS-201ENST00000246868 KLC1Q07866 573 aa18.2■□□□□ 0.5
SBDS-201ENST00000246868 MMEL1Q495T6 779 aa18.2■□□□□ 0.5
SBDS-201ENST00000246868 YOD1Q5VVQ6 348 aaPredicted RBP18.2■□□□□ 0.5
SBDS-201ENST00000246868 FAM71E1Q6IPT2 247 aa18.2■□□□□ 0.5
SBDS-201ENST00000246868 RIMKLAQ8IXN7 391 aa18.2■□□□□ 0.5
SBDS-201ENST00000246868 ARHGEF39Q8N4T4 335 aa18.2■□□□□ 0.5
SBDS-201ENST00000246868 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.2■□□□□ 0.51e-30■■■□□ 16.2
SBDS-201ENST00000246868 NETO1Q8TDF5 533 aa18.2■□□□□ 0.5
SBDS-201ENST00000246868 SLC45A3Q96JT2 553 aa18.2■□□□□ 0.5
SBDS-201ENST00000246868 C10orf90Q96M02 699 aa18.2■□□□□ 0.5
SBDS-201ENST00000246868 OR6C1Q96RD1 312 aa18.2■□□□□ 0.5
SBDS-201ENST00000246868 REEP4Q9H6H4 257 aa18.2■□□□□ 0.5
SBDS-201ENST00000246868 CUTCQ9NTM9 273 aa18.2■□□□□ 0.5
SBDS-201ENST00000246868 PHF11Q9UIL8 331 aa18.2■□□□□ 0.5
SBDS-201ENST00000246868 SPACA6W5XKT8 324 aa18.2■□□□□ 0.5
SBDS-201ENST00000246868 SCAMP2O15127 329 aaKnown RBP18.19■□□□□ 0.5
SBDS-201ENST00000246868 CFLARO15519 480 aa18.19■□□□□ 0.5
SBDS-201ENST00000246868 IL12AP29459 219 aa18.19■□□□□ 0.5
SBDS-201ENST00000246868 S100A3P33764 101 aa18.19■□□□□ 0.5
SBDS-201ENST00000246868 AVPR1BP47901 424 aa18.19■□□□□ 0.5
SBDS-201ENST00000246868 RASSF2P50749 326 aa18.19■□□□□ 0.5
SBDS-201ENST00000246868 INSM1Q01101 510 aaPredicted RBP18.19■□□□□ 0.5
SBDS-201ENST00000246868 C16orf72Q14CZ0 275 aa18.19■□□□□ 0.5
SBDS-201ENST00000246868 FAM174BQ3ZCQ3 159 aa18.19■□□□□ 0.5
SBDS-201ENST00000246868 MRM1Q6IN84 353 aaKnown RBP18.19■□□□□ 0.5
SBDS-201ENST00000246868 RIPOR1Q6ZS17 1223 aa18.19■□□□□ 0.5
SBDS-201ENST00000246868 GPR180Q86V85 440 aa18.19■□□□□ 0.5
SBDS-201ENST00000246868 BPHLQ86WA6 291 aaPredicted RBP18.19■□□□□ 0.5
SBDS-201ENST00000246868 EFCAB3Q8N7B9 438 aa18.19■□□□□ 0.5
SBDS-201ENST00000246868 AMER3Q8N944 861 aa18.19■□□□□ 0.5
SBDS-201ENST00000246868 TM4SF18Q96CE8 201 aa18.19■□□□□ 0.5
SBDS-201ENST00000246868 MTERF3Q96E29 417 aa18.19■□□□□ 0.5
SBDS-201ENST00000246868 NPLQ9BXD5 320 aaPredicted RBP18.19■□□□□ 0.5
SBDS-201ENST00000246868 LYRM4Q9HD34 91 aa18.19■□□□□ 0.5
SBDS-201ENST00000246868 ATAD3AQ9NVI7 634 aa18.19■□□□□ 0.5
SBDS-201ENST00000246868 MS4A12Q9NXJ0 267 aa18.19■□□□□ 0.5
SBDS-201ENST00000246868 FBXW2Q9UKT8 454 aa18.19■□□□□ 0.5
SBDS-201ENST00000246868 SRPK3Q9UPE1 567 aa18.19■□□□□ 0.5
SBDS-201ENST00000246868 GVINP1Q7Z2Y8 2422 aa18.18■□□□□ 0.5
SBDS-201ENST00000246868 H3BMH7 237 aa18.18■□□□□ 0.5
SBDS-201ENST00000246868 AGRPO00253 132 aa18.18■□□□□ 0.5
SBDS-201ENST00000246868 UNC5CO95185 931 aa18.18■□□□□ 0.5
SBDS-201ENST00000246868 NSA2O95478 260 aaKnown RBP18.18■□□□□ 0.5
SBDS-201ENST00000246868 T-ENOLP0DO92 83 aa18.18■□□□□ 0.5
SBDS-201ENST00000246868 DRD2P14416 443 aa18.18■□□□□ 0.5
SBDS-201ENST00000246868 PDX1P52945 283 aa18.18■□□□□ 0.5
SBDS-201ENST00000246868 MXRA7P84157 204 aa18.18■□□□□ 0.5
SBDS-201ENST00000246868 PGS1Q32NB8 556 aa18.18■□□□□ 0.5
SBDS-201ENST00000246868 VPS26BQ4G0F5 336 aa18.18■□□□□ 0.5
SBDS-201ENST00000246868 TIGD2Q4W5G0 525 aa18.18■□□□□ 0.5
SBDS-201ENST00000246868 CPTPQ5TA50 214 aa18.18■□□□□ 0.5
SBDS-201ENST00000246868 OR9A4Q8NGU2 314 aa18.18■□□□□ 0.5
SBDS-201ENST00000246868 MVB12AQ96EY5 273 aa18.18■□□□□ 0.5
SBDS-201ENST00000246868 CMKLR1Q99788 373 aa18.18■□□□□ 0.5
SBDS-201ENST00000246868 SLC7A5P2Q9GIP4 190 aa18.18■□□□□ 0.5
SBDS-201ENST00000246868 WDR41Q9HAD4 459 aa18.18■□□□□ 0.5
SBDS-201ENST00000246868 EFCAB1Q9HAE3 211 aa18.18■□□□□ 0.5
SBDS-201ENST00000246868 CLK4Q9HAZ1 481 aaKnown RBP18.18■□□□□ 0.5
SBDS-201ENST00000246868 SIDT1Q9NXL6 827 aaKnown RBP18.18■□□□□ 0.5
SBDS-201ENST00000246868 NDUFAF1Q9Y375 327 aa18.18■□□□□ 0.5
SBDS-201ENST00000246868 ASB4Q9Y574 426 aa18.18■□□□□ 0.5
SBDS-201ENST00000246868 A0A0A6YYC8 382 aaPredicted RBP18.17■□□□□ 0.5
SBDS-201ENST00000246868 A0A1W2PP18 115 aa18.17■□□□□ 0.5
SBDS-201ENST00000246868 ZNF860A6NHJ4 632 aa18.17■□□□□ 0.5
SBDS-201ENST00000246868 EFCAB7A8K855 629 aa18.17■□□□□ 0.5
SBDS-201ENST00000246868 I3L1I5 382 aaPredicted RBP18.17■□□□□ 0.5
SBDS-201ENST00000246868 PGRP06401 933 aa18.17■□□□□ 0.5
SBDS-201ENST00000246868 DDCP20711 480 aa18.17■□□□□ 0.5
SBDS-201ENST00000246868 CSRP1P21291 193 aaKnown RBP18.17■□□□□ 0.5
SBDS-201ENST00000246868 TLX1P31314 330 aaPredicted RBP18.17■□□□□ 0.5
SBDS-201ENST00000246868 BUD31P41223 144 aaPredicted RBP18.17■□□□□ 0.5
SBDS-201ENST00000246868 KIR3DL1P43629 444 aa18.17■□□□□ 0.5
SBDS-201ENST00000246868 CPA2P48052 419 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms