RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 SAP130Q9H0E3 1048 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 KCNH6Q9H252 994 aa12.42□□□□□ -0.42
VAMP4-201ENST00000236192 OR6C75A6NL08 312 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 ARHGAP33O14559 1287 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 GABRDO14764 452 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 CLDN9O95484 217 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 TSPAN12O95859 305 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 CD63P08962 238 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 ASMTP46597 345 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 IFITM3Q01628 133 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 BCL2L1Q07817 233 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 DUOXA1Q1HG43 343 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 SLC35G1Q2M3R5 365 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 PAN2Q504Q3 1202 aaKnown RBP12.41□□□□□ -0.42
VAMP4-201ENST00000236192 RPL13AP3Q6NVV1 102 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 SLC39A4Q6P5W5 647 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 DNAJC22Q8N4W6 341 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 ARL6IP6Q8N6S5 226 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 ZNF548Q8NEK5 533 aaPredicted RBP12.41□□□□□ -0.42
VAMP4-201ENST00000236192 SPATA22Q8NHS9 363 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 BTBD1Q9H0C5 482 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 OPA3Q9H6K4 179 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 DBNDD1Q9H9R9 158 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 TRIM36Q9NQ86 728 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 FZD4Q9ULV1 537 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 DERAQ9Y315 318 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 NAP1L6A6NFF2 107 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 ECI2O75521 394 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 EPORP19235 508 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 GIFP27352 417 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 AXLP30530 894 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 SOX9P48436 509 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 CRISP1P54107 249 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 IRF8Q02556 426 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 PDZK1IP1Q13113 114 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 PGM5Q15124 567 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 KANSL1Q7Z3B3 1105 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 UROC1Q96N76 676 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 P2RY13Q9BPV8 354 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 DIP2AQ14689 1571 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 LGALS8O00214 317 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 DARSP14868 501 aaKnown RBP12.41□□□□□ -0.42
VAMP4-201ENST00000236192 PSMA3P25788 255 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 SMSP52788 366 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 MLLT10P55197 1068 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 CREB5Q02930 508 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 ZNF252P-AS1Q0IIN9 211 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 CAPN13Q6MZZ7 669 aaPredicted RBP12.41□□□□□ -0.42
VAMP4-201ENST00000236192 FOXRED2Q8IWF2 684 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 TP53I13Q8NBR0 393 aaPredicted RBP12.41□□□□□ -0.42
VAMP4-201ENST00000236192 OR4C6Q8NH72 309 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 EDEM1Q92611 657 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 DUSP21Q9H596 190 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 SMCO4Q9NRQ5 59 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 PLIN4Q96Q06 1357 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 LOC100509620A0A075B734 347 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 RRASP10301 218 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 PFKLP17858 780 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 EIF2S3P41091 472 aaKnown RBP12.41□□□□□ -0.42
VAMP4-201ENST00000236192 RCAN2Q14206 197 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 ZBTB6Q15916 424 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 SLC36A4Q6YBV0 504 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 SLC30A8Q8IWU4 369 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 OR56B4Q8NH76 319 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 TANKQ92844 425 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 CDK15Q96Q40 435 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 AHSPQ9NZD4 102 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 DYRK1BQ9Y463 629 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 CCDC88AQ3V6T2 1871 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 E7EQ34 232 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 GOSR2O14653 212 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 PDSS1Q5T2R2 415 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 DPY19L2P1Q6NXN4 242 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 CDH26Q8IXH8 852 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 BOLLQ8N9W6 283 aaKnown RBP12.41□□□□□ -0.42
VAMP4-201ENST00000236192 NETO1Q8TDF5 533 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 FAM163AQ96GL9 167 aaPredicted RBP12.41□□□□□ -0.42
VAMP4-201ENST00000236192 ZNF282Q9UDV7 671 aaPredicted RBP12.41□□□□□ -0.42
VAMP4-201ENST00000236192 PCDHGB1Q9Y5G3 927 aa12.41□□□□□ -0.42
VAMP4-201ENST00000236192 DAPL1A0PJW8 107 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 NEDD8-MDP1E9PL57 170 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 ZNF670-ZNF695F2Z2N8 137 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 ACKR2O00590 384 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 SIX6O95475 246 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 VNN2O95498 520 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 NAE1Q13564 534 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 SCARB2Q14108 478 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 ATXN7L3Q14CW9 347 aaPredicted RBP12.4□□□□□ -0.42
VAMP4-201ENST00000236192 OR8J1Q8NGP2 316 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 SPATA33Q96N06 139 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 FEVQ99581 238 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 TDRD3Q9H7E2 651 aaKnown RBP12.4□□□□□ -0.42
VAMP4-201ENST00000236192 PXMP2Q9NR77 195 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 IGLV3-22A0A075B6J6 115 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 YDJCA8MPS7 323 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 MCIDASD6RGH6 385 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 FGF1P05230 155 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 PKMP14618 531 aaKnown RBP12.4□□□□□ -0.42
VAMP4-201ENST00000236192 APEX1P27695 318 aaKnown RBP12.4□□□□□ -0.42
VAMP4-201ENST00000236192 PCSK1P29120 753 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms