RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 LAPTM5Q13571 262 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 AMZ2Q86W34 360 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 ZFP82Q8N141 532 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 NR4A3Q92570 626 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 TMBIM1Q969X1 311 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 FCRL2Q96LA5 508 aaPredicted RBP10.74□□□□□ -0.69
MSH6-201ENST00000234420 HYLS1Q96M11 299 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 AGAP2Q99490 1192 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 PDCD2LQ9BRP1 358 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.74□□□□□ -0.694e-8■■□□□ 12.3
MSH6-201ENST00000234420 RPS10-NUDT3A0A1W2PQS6 291 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 PAHP00439 452 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 CDK1P06493 297 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 SNRNP70P08621 437 aaKnown RBP10.74□□□□□ -0.69
MSH6-201ENST00000234420 CD9P21926 228 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 ADH7P40394 386 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 RPS10P46783 165 aaKnown RBP10.74□□□□□ -0.69
MSH6-201ENST00000234420 MLC1Q15049 377 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 LRRC66Q68CR7 880 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 ZNF572Q7Z3I7 529 aaPredicted RBP10.74□□□□□ -0.69
MSH6-201ENST00000234420 YIPF7Q8N8F6 280 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 OR6N1Q8NGY5 312 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 ARL11Q969Q4 196 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 HMCESQ96FZ2 354 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 ORAI3Q9BRQ5 295 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 CREBZFQ9NS37 354 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 IL20RAQ9UHF4 553 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 M0R2N6 131 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 MAGEB4O15481 346 aaPredicted RBP10.74□□□□□ -0.69
MSH6-201ENST00000234420 AQP2P41181 271 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 PGM2L1Q6PCE3 622 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 WNT8BQ93098 351 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 GPR20Q99678 358 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 TRMOQ9BU70 441 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 UNKLQ9H9P5 680 aaKnown RBP10.74□□□□□ -0.69
MSH6-201ENST00000234420 HEBP2Q9Y5Z4 205 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 EEF1E1-BLOC1S5C9J1V9 151 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 ENSAO43768 121 aaKnown RBP10.74□□□□□ -0.69
MSH6-201ENST00000234420 CD79AP11912 226 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 CBR1P16152 277 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 POLR2CP19387 275 aaPredicted RBP10.74□□□□□ -0.69
MSH6-201ENST00000234420 ELK4P28324 431 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 GCNT1Q02742 428 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 LTC4SQ16873 150 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 C21orf62-AS1Q17RA5 79 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 RANBP3LQ86VV4 465 aaPredicted RBP10.74□□□□□ -0.69
MSH6-201ENST00000234420 NXPE1Q8N323 547 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 TMEM185AQ8NFB2 350 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 SLC44A1Q8WWI5 657 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 ZNF347Q96SE7 839 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 CCDC32Q9BV29 185 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 WDR26Q9H7D7 661 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 MAGEB17A8MXT2 336 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 PENKP01210 267 aaPredicted RBP10.74□□□□□ -0.69
MSH6-201ENST00000234420 SRPRAP08240 638 aaKnown RBP10.74□□□□□ -0.69
MSH6-201ENST00000234420 CLCN4P51793 760 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 CLCNKAP51800 687 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 CHRNEQ04844 493 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 SNTA1Q13424 505 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 VARS2Q5ST30 1063 aaKnown RBP10.74□□□□□ -0.69
MSH6-201ENST00000234420 MPP7Q5T2T1 576 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 HACD2Q6Y1H2 254 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 SAMD11Q96NU1 681 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 MKRN2Q9H000 416 aaKnown RBP10.74□□□□□ -0.69
MSH6-201ENST00000234420 CNTNAP4Q9C0A0 1308 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 SERTM1A2A2V5 107 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 ABCB7O75027 752 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 RAB36O95755 333 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 CHRNA1P02708 482 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 GBAP04062 536 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 DPP4P27487 766 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 TANGO2Q6ICL3 276 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 SLC39A4Q6P5W5 647 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 ALPK1Q96QP1 1244 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 MMP27Q9H306 513 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 GTF2IRD1Q9UHL9 959 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 RNF13O43567 381 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 ETV5P41161 510 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 LSSP48449 732 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 VSX2P58304 361 aaPredicted RBP10.73□□□□□ -0.69
MSH6-201ENST00000234420 MRPL49Q13405 166 aaKnown RBP10.73□□□□□ -0.69
MSH6-201ENST00000234420 FAM214AQ32MH5 1076 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 GJD3Q8N144 294 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 VRK1Q99986 396 aaPredicted RBP10.73□□□□□ -0.69
MSH6-201ENST00000234420 LHX5Q9H2C1 402 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 ZNF821O75541 412 aaPredicted RBP10.73□□□□□ -0.69
MSH6-201ENST00000234420 ACTL6BO94805 426 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 HTD2P86397 168 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 DSC3Q14574 896 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 FAM174BQ3ZCQ3 159 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 SLC5A11Q8WWX8 675 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 YTHDF1Q9BYJ9 559 aaKnown RBP10.73□□□□□ -0.69
MSH6-201ENST00000234420 PTCH2Q9Y6C5 1203 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 TRIM23P36406 574 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 HSPA7P48741 367 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 BCL2A1Q16548 175 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 ZNF439Q8NDP4 499 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 TMEM41AQ96HV5 264 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 SRRDQ9UH36 339 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 KCNK6Q9Y257 313 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms