RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 DDX39BQ13838 428 aaKnown RBP10.66□□□□□ -0.7
SF3B6-201ENST00000233468 ZRSR2Q15696 482 aaKnown RBP10.66□□□□□ -0.7
SF3B6-201ENST00000233468 UNC50Q53HI1 259 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 VWA2Q5GFL6 755 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 MFSD4BQ5TF39 518 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 PRAMEF9Q5VWM5 478 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 KHDRBS2Q5VWX1 349 aaKnown RBP10.66□□□□□ -0.7
SF3B6-201ENST00000233468 LIPMQ5VYY2 423 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 FRG2Q64ET8 278 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 ABHD17CQ6PCB6 329 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 GPRIN3Q6ZVF9 776 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 CLEC1AQ8NC01 280 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 ARMC2Q8NEN0 867 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 OR4F6Q8NGB9 312 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 OR52B6Q8NGF0 335 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 HUS1BQ8NHY5 278 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 RGMAQ96B86 450 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 TBC1D20Q96BZ9 403 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 SMIM10Q96HG1 83 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 TMEM237Q96Q45 408 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 FRG2BQ96QU4 278 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 TRMOQ9BU70 441 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 MS4A8Q9BY19 250 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 SLC29A3Q9BZD2 475 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 ADNPQ9H2P0 1102 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 ZBTB26Q9HCK0 441 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 ACSS2Q9NR19 701 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 HCN3Q9P1Z3 774 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 TRPS1Q9UHF7 1281 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 TUBD1Q9UJT1 453 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 EMCNQ9ULC0 261 aa10.66□□□□□ -0.7
SF3B6-201ENST00000233468 MRPS2Q9Y399 296 aaKnown RBP10.66□□□□□ -0.7
SF3B6-201ENST00000233468 BLACEA4D250 179 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 FOXO6A8MYZ6 492 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 IDSB3KWA1 339 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 AGPSO00116 658 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 CLDN4O14493 209 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 TM9SF1O15321 606 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 CHST10O43529 356 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 ESRRBO95718 433 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 TGFB1P01137 390 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 FHP07954 510 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 ACPPP15309 386 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 HMOX2P30519 316 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 NAGLUP54802 743 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 MAT1AQ00266 395 aaKnown RBP10.65□□□□□ -0.7
SF3B6-201ENST00000233468 HYAL2Q12891 473 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 TRAF3Q13114 568 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 CUL3Q13618 768 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 IL10RAQ13651 578 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 IGFBP7Q16270 282 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 TUBB8Q3ZCM7 444 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 MINDY4Q4G0A6 757 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 DEPDC1Q5TB30 811 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 IRAK1BP1Q5VVH5 260 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 MRGPREQ86SM8 312 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 PDSS2Q86YH6 399 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 APLFQ8IW19 511 aaPredicted RBP10.65□□□□□ -0.7
SF3B6-201ENST00000233468 PRSS58Q8IYP2 241 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 GOLGA6L1Q8N7Z2 621 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 WDR20Q8TBZ3 569 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 METTL6Q8TCB7 284 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 TCP10LQ8TDR4 215 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 ADAMTS17Q8TE56 1095 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 CNDP1Q96KN2 507 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 NSUN5Q96P11 429 aaKnown RBP10.65□□□□□ -0.7
SF3B6-201ENST00000233468 QRFPRQ96P65 431 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 FAM111AQ96PZ2 611 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 CDK15Q96Q40 435 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 MTERF1Q99551 399 aaKnown RBP10.65□□□□□ -0.7
SF3B6-201ENST00000233468 KLHL31Q9H511 634 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 EML4Q9HC35 981 aaKnown RBP10.65□□□□□ -0.7
SF3B6-201ENST00000233468 RRAGDQ9NQL2 400 aaPredicted RBP10.65□□□□□ -0.7
SF3B6-201ENST00000233468 DMRT3Q9NQL9 472 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 P4HTMQ9NXG6 502 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 MS4A12Q9NXJ0 267 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 MKL2Q9ULH7 1088 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 LRRK2Q5S007 2527 aa10.65□□□□□ -0.7
SF3B6-201ENST00000233468 ZNF860A6NHJ4 632 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 ARGFXA6NJG6 315 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 MKRN2OSH3BPM6 223 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 CNOT3O75175 753 aaKnown RBP10.64□□□□□ -0.71
SF3B6-201ENST00000233468 ALOX12BO75342 701 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 ULK1O75385 1050 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 SPAG7O75391 227 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 SEMA3DO95025 777 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 ZWINTO95229 277 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 UMODP07911 640 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 C8orf89P0DMQ9 161 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 ICAM2P13598 275 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 HSD3B1P14060 373 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 HSD3B2P26439 372 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 TLX1P31314 330 aaPredicted RBP10.64□□□□□ -0.71
SF3B6-201ENST00000233468 HNRNPH1P31943 449 aaKnown RBP10.64□□□□□ -0.71
SF3B6-201ENST00000233468 SERPINB5P36952 375 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 SSR2P43308 183 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 POLE2P56282 527 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 RPS13P62277 151 aaKnown RBP10.64□□□□□ -0.71
SF3B6-201ENST00000233468 CASP8Q14790 479 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 ATP1A1-AS1Q5TC04 95 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms