RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 TEX13CA0A0J9YWL9 993 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 ST3GAL3Q11203 375 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 ATXN7L3Q14CW9 347 aaPredicted RBP13.31□□□□□ -0.28
HCFC2-201ENST00000229330 FAM122CQ6P4D5 195 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 MBOAT1Q6ZNC8 495 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 HS3ST5Q8IZT8 346 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 MAFIPQ8WZ33 124 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 SUSD6Q92537 303 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 CLIP3Q96DZ5 547 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 SNX18Q96RF0 628 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 CDADC1Q9BWV3 514 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 IGSF5Q9NSI5 407 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 NLE1Q9NVX2 485 aaPredicted RBP13.31□□□□□ -0.28
HCFC2-201ENST00000229330 GLS2Q9UI32 602 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 HS3ST4Q9Y661 456 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 TEX51A0A1B0GUA7 166 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 PROM1O43490 865 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 NCBP2P52298 156 aaKnown RBP eCLIP13.31□□□□□ -0.28
HCFC2-201ENST00000229330 EIF4HQ15056 248 aaKnown RBP13.31□□□□□ -0.28
HCFC2-201ENST00000229330 BAIAP2L2Q6UXY1 529 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 ZNF563Q8TA94 476 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 ADAMTS16Q8TE57 1224 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 ARMC5Q96C12 935 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 LYARQ9NX58 379 aaKnown RBP13.31□□□□□ -0.28
HCFC2-201ENST00000229330 ZDHHC3Q9NYG2 299 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 WRBO00258 174 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 FAAHO00519 579 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 PRMT3O60678 531 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 CXCR4P61073 352 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 MAD2L1BPQ15013 274 aaPredicted RBP13.31□□□□□ -0.28
HCFC2-201ENST00000229330 OR2T35Q8NGX2 323 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 C1QTNF7Q9BXJ2 289 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 IGFLR1Q9H665 355 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 TMEM185BQ9H7F4 350 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 A0A1B0GVI7 797 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 SMAD9O15198 467 aaKnown RBP13.31□□□□□ -0.28
HCFC2-201ENST00000229330 RCBTB2O95199 551 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 CTNNB1P35222 781 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 MAGEA6P43360 314 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 E2F1Q01094 437 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 SELPLGQ14242 412 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 ABRAXAS2Q15018 415 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 ALG11Q2TAA5 492 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 SMYD5Q6GMV2 418 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 OSTF1Q92882 214 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 RPL10LQ96L21 214 aaKnown RBP13.31□□□□□ -0.28
HCFC2-201ENST00000229330 PTPN18Q99952 460 aa13.31□□□□□ -0.28
HCFC2-201ENST00000229330 LOC100509620A0A075B734 347 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 CLDN24A6NM45 220 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 PI15O43692 258 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 CDC40O60508 579 aaKnown RBP eCLIP13.3□□□□□ -0.28
HCFC2-201ENST00000229330 KLK1P06870 262 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 VAMP1P23763 118 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 GNALP38405 381 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 OR12D2P58182 307 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 PTCHD3Q3KNS1 767 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 ZNF691Q5VV52 312 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 NOXRED1Q6NXP6 359 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 GET4Q7L5D6 327 aaPredicted RBP13.3□□□□□ -0.28
HCFC2-201ENST00000229330 SPRED1Q7Z699 444 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 PHYKPLQ8IUZ5 450 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 OR8K5Q8NH50 307 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 NETO1Q8TDF5 533 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 NDOR1Q9UHB4 597 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 GPSM3Q9Y4H4 160 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 CREBL2O60519 120 aaPredicted RBP13.3□□□□□ -0.28
HCFC2-201ENST00000229330 SHMT2P34897 504 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 ARHGAP1Q07960 439 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 RHEBQ15382 184 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 TRAM1Q15629 374 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 FBXL22Q6P050 247 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 TICAM1Q8IUC6 712 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 SYNPOQ8N3V7 929 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 CHCHD4Q8N4Q1 142 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 MRGPRX2Q96LB1 330 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 YIPF4Q9BSR8 244 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 STRA6Q9BX79 667 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 MINDY3Q9H8M7 445 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 RANGRFQ9HD47 186 aaPredicted RBP13.3□□□□□ -0.28
HCFC2-201ENST00000229330 ACOT13Q9NPJ3 140 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 IMP3Q9NV31 184 aaKnown RBP13.3□□□□□ -0.28
HCFC2-201ENST00000229330 FAM72CH0Y354 149 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 GRM6O15303 877 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 HCRTO43612 131 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 ADH1AP07327 375 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 HOXD8P13378 290 aaPredicted RBP13.3□□□□□ -0.28
HCFC2-201ENST00000229330 MLLT6P55198 1093 aaPredicted RBP13.3□□□□□ -0.28
HCFC2-201ENST00000229330 CTBP2P56545 445 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 S100A12P80511 92 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 OR4D1Q15615 310 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 GPR19Q15760 415 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 FAM72AQ5TYM5 149 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 FAM72DQ6L9T8 149 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 VTCN1Q7Z7D3 282 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 FAM72BQ86X60 149 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 CADM3Q8N126 398 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 OR2L3Q8NG85 312 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 CXorf40BQ96DE9 158 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 CCM2Q9BSQ5 444 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 UGT2A1Q9Y4X1 527 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms