RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 TMEM184CQ9NVA4 438 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 GPATCH2Q9NW75 528 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 TAS2R16Q9NYV7 291 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 ITGB1BP2Q9UKP3 347 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 NAALAD2Q9Y3Q0 740 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 DOCK9Q9BZ29 2069 aa12.58□□□□□ -0.4
CTNS-201ENST00000046640 HELZP42694 1942 aaKnown RBP12.57□□□□□ -0.4
CTNS-201ENST00000046640 A0A0G2JN53 185 aa12.57□□□□□ -0.4
CTNS-201ENST00000046640 PSMD11O00231 422 aa12.57□□□□□ -0.4
CTNS-201ENST00000046640 QSOX1O00391 747 aa12.57□□□□□ -0.4
CTNS-201ENST00000046640 LILRB5O75023 590 aa12.57□□□□□ -0.4
CTNS-201ENST00000046640 PSMB5P28074 263 aa12.57□□□□□ -0.4
CTNS-201ENST00000046640 DNAJA1P31689 397 aaKnown RBP12.57□□□□□ -0.4
CTNS-201ENST00000046640 NR4A2P43354 598 aa12.57□□□□□ -0.4
CTNS-201ENST00000046640 SELENBP1Q13228 472 aa12.57□□□□□ -0.4
CTNS-201ENST00000046640 C6orf183Q5T699 404 aa12.57□□□□□ -0.4
CTNS-201ENST00000046640 ZNF557Q8N988 423 aaPredicted RBP12.57□□□□□ -0.4
CTNS-201ENST00000046640 OR52E4Q8NGH9 312 aa12.57□□□□□ -0.4
CTNS-201ENST00000046640 OR9A1PQ8NGU1 263 aa12.57□□□□□ -0.4
CTNS-201ENST00000046640 UTP15Q8TED0 518 aaKnown RBP12.57□□□□□ -0.4
CTNS-201ENST00000046640 FAM129BQ96TA1 746 aa12.57□□□□□ -0.4
CTNS-201ENST00000046640 SLC35A5Q9BS91 424 aa12.57□□□□□ -0.4
CTNS-201ENST00000046640 COPS4Q9BT78 406 aa12.57□□□□□ -0.4
CTNS-201ENST00000046640 BTBD2Q9BX70 525 aa12.57□□□□□ -0.4
CTNS-201ENST00000046640 RPS6KA6Q9UK32 745 aa12.57□□□□□ -0.4
CTNS-201ENST00000046640 SPTBN5Q9NRC6 3674 aaKnown RBP12.57□□□□□ -0.4
CTNS-201ENST00000046640 CXorf51AA0A1B0GTR3 108 aa12.57□□□□□ -0.4
CTNS-201ENST00000046640 FEZF1A0PJY2 475 aa12.57□□□□□ -0.4
CTNS-201ENST00000046640 A6NL46 340 aa12.57□□□□□ -0.4
CTNS-201ENST00000046640 SUV39H1O43463 412 aa12.57□□□□□ -0.4
CTNS-201ENST00000046640 WBP4O75554 376 aaKnown RBP12.57□□□□□ -0.4
CTNS-201ENST00000046640 SRPRAP08240 638 aaKnown RBP12.57□□□□□ -0.4
CTNS-201ENST00000046640 C1GALT1C1LP0DN25 315 aa12.57□□□□□ -0.4
CTNS-201ENST00000046640 RRM2P31350 389 aa12.57□□□□□ -0.4
CTNS-201ENST00000046640 MAGEA2P43356 314 aa12.57□□□□□ -0.4
CTNS-201ENST00000046640 PCYT1AP49585 367 aa12.57□□□□□ -0.4
CTNS-201ENST00000046640 RPS26P62854 115 aaKnown RBP12.57□□□□□ -0.4
CTNS-201ENST00000046640 NPRL3Q12980 569 aa12.57□□□□□ -0.4
CTNS-201ENST00000046640 HNRNPA1L2Q32P51 320 aaKnown RBP12.57□□□□□ -0.4
CTNS-201ENST00000046640 SYT6Q5T7P8 510 aaPredicted RBP12.57□□□□□ -0.4
CTNS-201ENST00000046640 KIAA1614Q5VZ46 1190 aa12.57□□□□□ -0.4
CTNS-201ENST00000046640 SPATC1Q76KD6 591 aa12.57□□□□□ -0.4
CTNS-201ENST00000046640 GET4Q7L5D6 327 aaPredicted RBP12.57□□□□□ -0.4
CTNS-201ENST00000046640 NLRP8Q86W28 1048 aa12.57□□□□□ -0.4
CTNS-201ENST00000046640 OTUB2Q96DC9 234 aa12.57□□□□□ -0.4
CTNS-201ENST00000046640 FCRL1Q96LA6 429 aa12.57□□□□□ -0.4
CTNS-201ENST00000046640 ABCG4Q9H172 646 aa12.57□□□□□ -0.4
CTNS-201ENST00000046640 TM9SF3Q9HD45 589 aa12.57□□□□□ -0.4
CTNS-201ENST00000046640 RAD18Q9NS91 495 aa12.57□□□□□ -0.4
CTNS-201ENST00000046640 CCDC88CQ9P219 2028 aa12.57□□□□□ -0.4
CTNS-201ENST00000046640 LINC00854A0A1B0GVQ3 168 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 C1orf226A1L170 272 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 GCM2O75603 506 aaPredicted RBP12.56□□□□□ -0.4
CTNS-201ENST00000046640 GRK5P34947 590 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 ALDH9A1P49189 494 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 PRIM2P49643 509 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 MPEG1Q2M385 716 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 SPIN4Q56A73 249 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 CBLL1Q75N03 491 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 EIF3MQ7L2H7 374 aaKnown RBP12.56□□□□□ -0.4
CTNS-201ENST00000046640 HEATR4Q86WZ0 1026 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 RNF130Q86XS8 419 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 FAM20CQ8IXL6 584 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 ENTHD1Q8IYW4 607 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 SYNPOQ8N3V7 929 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 NFKBIDQ8NI38 313 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 SLC5A11Q8WWX8 675 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 CHCHD6Q9BRQ6 235 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 BRF2Q9HAW0 419 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 GPR83Q9NYM4 423 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 J3KTA2 159 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 PCDH8O95206 1070 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 FPR1P21462 350 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 TGFBR2P37173 567 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 SLC19A1P41440 591 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 IL12RB1P42701 662 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 ZNF763Q0D2J5 394 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 CNTN1Q12860 1018 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 IL18R1Q13478 541 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 CAMK2GQ13555 558 aaPredicted RBP12.56□□□□□ -0.4
CTNS-201ENST00000046640 SF3B4Q15427 424 aaKnown RBP eCLIP12.56□□□□□ -0.4
CTNS-201ENST00000046640 AGAP7PQ5VUJ5 663 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 STEAP3Q658P3 488 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 CCDC80Q76M96 950 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 ARMC8Q8IUR7 673 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 SVOPQ8N4V2 548 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 SCAIQ8N9R8 606 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 APH1BQ8WW43 257 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 CAPSLQ8WWF8 208 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 PPCDCQ96CD2 204 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 LRIG1Q96JA1 1093 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 Q96MT0 163 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 ZDHHC5Q9C0B5 715 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 OR51E2Q9H255 320 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 DMRT3Q9NQL9 472 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 CCDC177Q9NQR7 707 aaPredicted RBP12.56□□□□□ -0.4
CTNS-201ENST00000046640 WDR70Q9NW82 654 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 RHCGQ9UBD6 479 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 TAC3Q9UHF0 121 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 RNF6Q9Y252 685 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms