RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 NfixP70257 488 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Uba1Q02053 1058 aaKnown RBP9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 HgfQ08048 728 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Hbq1bQ3U0A6 142 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Entpd6Q3U0P5 455 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Syndig1lQ3USQ7 237 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Wdr20Q3UWE6 569 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Pon3Q62087 354 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Ppp3r1Q63810 170 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Stxbp2Q64324 593 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Adh7Q64437 374 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Ssxb3Q6XAS4 170 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 PrcpQ7TMR0 491 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Olfr1140Q7TR39 311 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Fbxo5Q7TSG3 421 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Mppe1Q80XL7 396 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Jmjd4Q8BFT6 427 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 FicdQ8BIX9 458 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Ldhal6bQ8BVP2 382 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Tmem203Q8R235 136 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Usp3Q91W36 520 aaKnown RBP9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 AassQ99K67 926 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Tmem179bQ9CY24 219 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 DlstQ9D2G2 454 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 LhppQ9D7I5 270 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Ap3s1Q9DCR2 193 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Piwil1Q9JMB7 862 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Dnajb1Q9QYJ3 340 aaKnown RBP9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Eif2s3xQ9Z0N1 472 aaKnown RBP9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Eif2s3yQ9Z0N2 472 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Cytl1A1E5L0 139 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Fabp9O08716 132 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 ChadO55226 358 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 TrhrP21761 393 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Slc1a5P51912 553 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Map2k6P70236 334 aaKnown RBP9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Adra2aQ01338 450 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Mrgprb1Q3UG61 350 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 DbpQ60925 325 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Slc6a3Q61327 619 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Btf3Q64152 204 aaKnown RBP9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 XpaQ64267 272 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 VclQ64727 1066 aaKnown RBP9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Otub1Q7TQI3 271 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Olfr670Q7TRP3 312 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Fam98bQ80VD1 429 aaKnown RBP9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Creg2Q8BGC9 288 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Fbxl2Q8BH16 423 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Ssuh2Q8C3L1 340 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Irak2Q8CFA1 622 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Akr1c18Q8K023 323 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Scmh1Q8K214 706 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Micu1Q8VCX5 477 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Olfr729Q8VET4 323 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Olfr202Q8VGQ3 307 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Ginm1Q91WR6 327 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Sntb1Q99L88 537 aaKnown RBP9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Tmem33Q9CR67 247 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Tmem269Q9D4Y8 254 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Zfp84Q9D654 559 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Exosc8Q9D753 276 aaKnown RBP9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Nme7Q9QXL8 395 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Carm1Q9WVG6 608 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Uba2Q9Z1F9 638 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 H2afb3S4R1G7 115 aa9.38□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Gpr155A2AWR3 868 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Olfr655E9Q252 308 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Cyp2w1E9Q816 493 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Gm8220F6YKI2 213 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Pbx3O35317 434 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Lhx8O35652 367 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Abcb1bP06795 1276 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Anxa6P14824 673 aaKnown RBP9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 NdnP25233 325 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Cd86P42082 309 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 MazP56671 477 aaKnown RBP9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Rgs16P97428 201 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Bpifa6Q0VGU8 367 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Alg10bQ3UGP8 474 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Zc3h12aQ5D1E7 596 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Spata13Q5DU57 656 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Crhr2Q60748 411 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Spin2cQ6NVE3 257 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Chst9Q76EC5 413 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Pcdh8Q7TSK3 1070 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Enkd1Q7TSV9 346 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Slitrk4Q810B8 837 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Galnt6Q8C7U7 622 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Pttg1ipQ8R143 174 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 HopxQ8R1H0 73 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Camkk1Q8VBY2 505 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 TapbplQ8VD31 451 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Cers2Q924Z4 380 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Cmtm3Q99LJ5 184 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Tmem218Q9CQ44 115 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Chp2Q9D869 196 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Tex22Q9D9U4 189 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 HcstQ9QUJ0 79 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 HraslsQ9QZU4 167 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Prkab1Q9R078 270 aa9.37□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms