RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Mtx2O88441 263 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Znf703P0CL69 594 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Nell1Q2VWQ2 810 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Tmem184cQ3TPR7 525 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Xkr9Q5GH62 373 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr1288Q7TQY0 312 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 LsampQ8BLK3 341 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Plekhs1Q8BW88 474 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 BpifcQ8C186 509 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Vmn1r234Q8R298 329 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Klhl25Q8R2P1 589 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 TsaccQ9DA44 124 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr1508Q9R0K4 310 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ehd1Q9WVK4 534 aaKnown RBP9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Xlr5aA2BI45 236 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Nhsl2B1AXH1 854 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gm8127E9Q0P0 100 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gm8094K7N6U8 211 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Clk4O35493 481 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 AurkcO88445 282 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 P01807 119 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 TP20293 436 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Pcsk2P21661 637 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 ThpoP40226 356 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Rph3aP47708 681 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Pde7aP70453 456 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Upf3aQ3ULJ3 422 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Klra2Q60660 288 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ggt1Q60928 568 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Klhl23Q6GQU2 558 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Tas2r39Q7TQA5 319 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Arl15Q8BGR6 204 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 RhdQ8CF94 418 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Irak2Q8CFA1 622 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 HopxQ8R1H0 73 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Metap1dQ9CPW9 335 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Mgat4dQ9D4R2 373 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 ClpxQ9JHS4 634 aaKnown RBP9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Creb3l1Q9Z125 519 aa9.37□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gm12695A2AGB2 545 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ttll2A4Q9E4 540 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gm4788E9Q8B5 879 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Vmn1r176G3UW31 304 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Vmn1r12G5E8G1 307 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gm21915J3QPM7 133 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Reps1O54916 795 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Bcl6P41183 707 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Alox5P48999 674 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Csrp3P50462 194 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Lrpap1P55302 360 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Defb23Q30KP0 166 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Hepacam2Q4VAH7 463 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Dsg4Q7TMD7 1041 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Syt16Q7TN83 639 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Q8BHR8 331 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Cdh7Q8BM92 785 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Tmem72Q8C3K5 275 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Cops8Q8VBV7 209 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr622Q8VGY7 317 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 EtfdhQ921G7 616 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Tmem159Q922Z1 161 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ifitm3Q9CQW9 137 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Q9D112 206 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 TrehQ9JLT2 576 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr49Q9Z1V0 313 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ank3G5E8K5 1961 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Zfp811A0A0J9YU71 552 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Btnl6A2CG22 539 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Zfp952B0V2W4 504 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 A430033K04RikE9Q8G5 680 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gm3488M0QW81 238 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ikzf3O08900 507 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Mtnd2P03893 345 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 ItgamP05555 1153 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 B4galnt2Q09199 510 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Plpp4Q0VBU9 271 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Foxk2Q3UCQ1 651 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Bhlha9Q5RJB0 231 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Nr0b2Q62227 260 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gm5416Q6IE28 97 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Tas2r13Q7M720 305 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Znf32Q80V23 272 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Zbtb24Q80X44 710 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Nrn1lQ8C4W3 162 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Wdr26Q8C6G8 641 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr1469Q8VFW5 309 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr48Q8VGN4 301 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Oas1hQ8VI97 369 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Atg13Q91YI1 516 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 NtpcrQ9CQA9 190 aaKnown RBP9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Hcar2Q9EP66 360 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr1247A2AT78 314 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Aadacl2B2RWD2 401 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Vmn2r12L7N217 831 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Mybpc3O70468 1270 aaKnown RBP9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Fcgr2P08101 330 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 GiprQ0P543 460 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Tmem253Q3UNB8 204 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Fam189bQ5HZJ5 669 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 GcgrQ61606 485 aa9.36□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 33.8 ms