RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Rhox2fA2ANE0 191 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Gm7945F6QI24 236 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Gm5861F6VCN9 180 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 4933402N22RikF7D1B3 190 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Cxcl9P18340 126 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 TP20293 436 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Hoxb9P20615 250 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Ptger4P32240 513 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Alox12P39655 663 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Gpr143P70259 405 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Slc37a3Q3TIT8 494 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Slc27a5Q4LDG0 689 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Slc26a10Q5EBI0 492 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 AbrQ5SSL4 859 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Dnajc11Q5U458 559 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Larp4bQ6A0A2 741 aaKnown RBP12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Ldoc1Q7TPY9 151 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Phf24Q80TL4 400 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Rgs7bpQ8BQP9 257 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Nlgn3Q8BYM5 825 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Cyp51a1Q8K0C4 503 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 SdslQ8R238 329 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Ccdc58Q8R3Q6 144 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Pex16Q91XC9 336 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 NgrnQ99KS2 293 aaKnown RBP12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Ms4a10Q99N03 267 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Trim12aQ99PQ1 284 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Cby3Q9CVN6 235 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Qrsl1Q9CZN8 525 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 GhrlQ9EQX0 117 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Wdr54Q9R0D8 334 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Ptges3Q9R0Q7 160 aaKnown RBP12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Zfp952B0V2W4 504 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Vmn2r106E9PY92 862 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Gm8127E9Q0P0 100 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Gm8094K7N6U8 211 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Gm5152L7N200 190 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Man2b2O54782 1018 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Itm2bO89051 266 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Cyr61P18406 379 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Rad52P43352 420 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Efna1P52793 205 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Atxn1P54254 791 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Btbd3P58545 530 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Ica1P97411 478 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 G6pdxQ00612 515 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Tigd2Q0VBL1 525 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 CrtamQ149L7 389 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Kcna7Q17ST2 489 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Cpxcr1Q3V0P1 322 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Cxcl3Q6W5C0 100 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Olfr1318Q7TQW6 320 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 B4gat1Q8BWP8 415 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Bpifb2Q8C1E1 462 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Nlrp10Q8CCN1 673 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Trnt1Q8K1J6 434 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Olfr450Q8VF81 310 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Olfr1317Q8VF84 316 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Pcdhga9Q91XX9 932 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Pcdhb19Q91Y01 801 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Tm9sf3Q9ET30 587 aa12.91□□□□□ -0.34
Nup88-201ENSMUST00000035283 Igkv12-98A0A0G2JGF9 115 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 Lrr1D3YY91 422 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 Vmn2r97K7N6Z2 861 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 Grem1O70326 184 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 CryaaP24622 196 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 Cfl2P45591 166 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 TshrP47750 764 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 Crybb2P62696 205 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 Ccdc177Q3UHB8 706 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 Elavl4Q61701 385 aaKnown RBP12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 Sdc3Q64519 442 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 Lemd2Q6DVA0 511 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 Galnt7Q80VA0 657 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 Commd7Q8BG94 200 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 BtdQ8CIF4 520 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 Olfr818Q8VG46 318 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 Olfr690Q8VH18 315 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 Snx4Q91YJ2 450 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 Grip1Q925T6 1127 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 Cstf3Q99LI7 717 aaKnown RBP12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 Mzt2Q9CQ25 159 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 Pin4Q9CWW6 131 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 9230112D13RikQ9D260 137 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 Vsig1Q9D2J4 407 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 Cldn7Q9Z261 211 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 H60cB1B213 197 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 1700014D04RikJ3QMS2 983 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 Vmn2r4K7N784 913 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 Gm17174M0QWQ9 212 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 Ap1s1P61967 158 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 Rps5P97461 204 aaKnown RBP12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 Alg10bQ3UGP8 474 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 Mylk4Q5SUV5 386 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 Olfr735Q7TRM4 354 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 NanogQ80Z64 305 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 Colec12Q8K4Q8 742 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 Mettl22Q8R1C6 393 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 Spon1Q8VCC9 807 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 Olfr722Q8VFC8 308 aa12.9□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 41.8 ms